lineage | Count |
---|---|
lineage4.2.2.2 | 4 |
lineage2.2.1 | 15 |
lineage2.2.1;lineage4.8 | 1 |
lineage4.1.3 | 5 |
lineage3 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3;lineage4.2.2.2 | 1 |
lineage4.6.4 | 2 |
lineage2.2.2 | 6 |
lineage2.1 | 1 |
lineage1.1.3.3;lineage4 | 1 |
lineage4.1.1.3 | 1 |
lineage4 | 2 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | SRR28044403 | MDR-TB | lineage4.2.2.2 | None | SRR28868540 | MDR-TB | lineage2.2.1 | None | ERR4827606 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR4423636 | MDR-TB | lineage4.1.3 | None | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13261084 | MDR-TB | lineage3 | None | SRR29440929 | HR-TB | lineage1.2.1.2.1 | None | SRR25827733 | Pre-XDR-TB | lineage3;lineage4.2.2.2 | None | SRR28706677 | MDR-TB | lineage2.2.1 | None | ERR4829153 | Pre-XDR-TB | lineage4.6.4 | ng | SRR1723544 | MDR-TB | lineage2.2.1 | cn | SRR1013550 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093918 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799677 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4829125 | Pre-XDR-TB | lineage4.6.4 | ng | SRR11662251 | MDR-TB | lineage2.2.1 | None | SRR21576574 | MDR-TB | lineage2.1 | None | SRR3724928 | MDR-TB | lineage4.1.3 | ci | ERR11043574 | HR-TB | lineage4.1.3 | None | SRR29017444 | MDR-TB | lineage1.1.3.3;lineage4 | None | ERR4799460 | Pre-XDR-TB | lineage2.2.1 | in | SRR1144725 | Pre-XDR-TB | lineage2.2.2 | None | SRR3725718 | MDR-TB | lineage4.1.3 | ci | SRR11662593 | MDR-TB | lineage2.2.1 | None | SRR27980490 | MDR-TB | lineage4.1.1.3 | None | SAMN02398716 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4178287 | MDR-TB | lineage4 | None | SRR1013549 | Pre-XDR-TB | lineage2.2.2 | None | SRR12072588 | MDR-TB | lineage2.2.1 | None | ERR13237767 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284930 | HR-TB | lineage4.1.3 | None | SRR10040149 | MDR-TB | lineage2.2.1 | None | SRR10040457 | MDR-TB | lineage2.2.1 | None | ERR4457811 | MDR-TB | lineage4 | None | SRR12420793 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662365 | HR-TB | lineage2.2.1 | None | SRR7653083 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796542 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4797173 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR6824636 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10040378 | MDR-TB | lineage2.2.1 | None |
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