Rv2245 - c.-39C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
12462 Sensitive
389 RR-TB
1226 HR-TB
2067 MDR-TB
530 Pre-XDR-TB
48 XDR-TB
1298 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1896 |
| lineage4.1.2.1 | 15256 |
| lineage4.1.2.1;lineage4.2.1 | 36 |
| lineage4.1.2.1;lineage4.2 | 6 |
| lineage4.1.2.1.1 | 294 |
| lineage4.1.2.1;lineage4.4.1.1 | 7 |
| lineage1.1.1;lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.8 | 43 |
| lineage1.1.2;lineage4.1.2.1 | 4 |
| lineage3.1;lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 72 |
| lineage4.1.2;lineage4.3.4.2.1 | 1 |
| lineage4.1.2;lineage4.3.4.2 | 1 |
| lineage4.1.2.1;lineage4.2.1;lineage4.9 | 22 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 4 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| lineage4.1.2.1;lineage4.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.3.3 | 51 |
| lineage4.1.2.1;lineage4.9 | 113 |
| lineage4.1.2.1;lineage4.3.2 | 19 |
| lineage4.1.2;lineage4.3.3 | 5 |
| lineage2.2.1.1;lineage4.1.2.1 | 3 |
| lineage4.1.2.1;lineage4.3.4.2 | 16 |
| lineage1.1.2;lineage4.1.2 | 1 |
| lineage4.1.2.1;lineage4.3 | 6 |
| lineage2.2.1;lineage4.1 | 1 |
| lineage3.1.1;lineage4.1.2.1 | 1 |
| lineage4.1.2;lineage4.2.1;lineage4.9 | 9 |
| lineage2.2.1;lineage4.1.2 | 8 |
| lineage4.1.2.1;lineage4.6.2.2 | 4 |
| lineage4.1.1;lineage4.1.2.1 | 8 |
| lineage4.1.2.1;lineage4.4.1 | 2 |
| lineage4.1.2.1;lineage4.3.2.1 | 3 |
| lineage3;lineage4.1.2 | 1 |
| lineage4.1.1.3;lineage4.1.2.1 | 5 |
| lineage4.1.2.1;lineage6.1.3 | 1 |
| lineage4.1.2;lineage4.2.2.2 | 1 |
| lineage4.1.2;lineage4.1.4 | 2 |
| lineage4 | 1 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage2.2;lineage4.1.2.1 | 5 |
| 4 | |
| lineage4.1.2.1;lineage4.3.1 | 1 |
| lineage4.9 | 4 |
| lineage2.2.2;lineage4.1.2.1 | 3 |
| lineage4.1.2;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage6.2.3 | 2 |
| lineage4.1.2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.2;lineage4.9 | 4 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.3.4.1 | 12 |
| lineage4.1.2.1;lineage6.1.1 | 2 |
| lineage4.1.2;lineage4.3.4 | 2 |
| lineage4.1;lineage4.3.2 | 1 |
| lineage4.1.1;lineage4.1.2 | 1 |
| lineage3.1;lineage4.1.2 | 2 |
| lineage4.1.2;lineage4.8 | 3 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.1.2.1;lineage6.3.1 | 3 |
| lineage1.1;lineage4.1.2.1 | 1 |
| lineage4.1.2;lineage4.9 | 4 |
| lineage4.1.1.1;lineage4.1.2.1 | 1 |
| lineage3;lineage4.1.2.1 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.1.1;lineage4.1.2 | 3 |
| lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2;lineage4.2.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1;lineage6.1 | 1 |
| lineage1.2.2.2;lineage4.1.2 | 1 |
| lineage1.2.2.2;lineage4.1.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.2.1;lineage4.3.4 | 1 |
| lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1;lineage4.7 | 1 |
| lineage4.1.2.1;lineage5.3 | 1 |
| lineage1.2.1.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.5 | 1 |
| lineage4.1;lineage4.2.1;lineage4.9 | 1 |
| lineage4.1.2;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.1.2.1;lineage4.3.2 | 1 |
| lineage1.1.3.2;lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.7 | 3 |
| lineage2.2.1.1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2;lineage4.1.2.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1;lineage6.3.2 | 1 |
| lineage4.1.2.1;lineage4.2.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.1.1.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage3;lineage4.1.2.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.1.2.1;lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage1.1.2;lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 18020 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 18020 rows and could cause your browser to crash if rendered.
