Rv2245 - c.18C>T
Drug resistance types
12988 Sensitive
294 RR-TB
2300 HR-TB
1850 MDR-TB
276 Pre-XDR-TB
74 XDR-TB
11933 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1088 |
| La1.8.1 | 6987 |
| lineage1.1.1 | 1053 |
| lineage1.1.3.2 | 503 |
| La2 | 261 |
| lineage1.2.1.1 | 194 |
| lineage1.1.2 | 4325 |
| lineage5.1.3 | 41 |
| lineage1.2.1.2.1 | 3317 |
| La1.2 | 672 |
| La1.4 | 128 |
| lineage1.2.2.2 | 2534 |
| lineage6.3.1 | 299 |
| La1.3 | 131 |
| La3 | 247 |
| La1.7.1 | 964 |
| lineage1.2.2.1 | 432 |
| lineage1.1.2;lineage2 | 1 |
| La1.6 | 127 |
| La1.2.BCG | 629 |
| lineage6.1.1 | 246 |
| lineage6.1.3;lineage6.2 | 2 |
| lineage1.2.1.2 | 576 |
| lineage5.1.2 | 68 |
| lineage1.1.1.1 | 1541 |
| La3;lineage4.3.4 | 1 |
| lineage1.1.3 | 228 |
| La1.8.2 | 252 |
| lineage6.2.3 | 112 |
| lineage1.1.3.3 | 226 |
| lineage1.2.2.2;lineage2.2.1 | 21 |
| lineage1.1.3.1;lineage4 | 3 |
| La1.8.X-unk6 | 9 |
| lineage7 | 78 |
| 116 | |
| lineage6.1.3 | 405 |
| M.canetti | 68 |
| lineage6.1.2 | 123 |
| lineage5.3 | 51 |
| lineage5.1.1 | 207 |
| lineage1.1.2;lineage4.1.2 | 1 |
| lineage5.2 | 69 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage5 | 29 |
| M.canetti;lineage2.1;lineage4.9 | 4 |
| lineage5.1.4 | 81 |
| lineage5.1.2;lineage6.3.1 | 1 |
| lineage1.2.2.2;lineage3 | 13 |
| lineage1.1 | 31 |
| lineage8 | 5 |
| lineage2.1;lineage6.3 | 2 |
| La1.7 | 31 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| lineage6.3.3 | 51 |
| lineage6.2.1 | 33 |
| lineage1.2.1 | 60 |
| lineage1.1.1.1;lineage1.1.2 | 1 |
| La1.1 | 9 |
| lineage2.2 | 2 |
| lineage6.2.2 | 93 |
| La1.3;lineage1.2.2.2 | 16 |
| lineage1.1.2;lineage4 | 12 |
| lineage4.8 | 3 |
| lineage1.2.1.1;lineage4 | 2 |
| lineage9 | 36 |
| La1.2.BCG;lineage4.9 | 8 |
| lineage6.3.2 | 26 |
| lineage1 | 2 |
| lineage6 | 39 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage1.1.3.2;lineage3.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage1.2.2.2;lineage4 | 8 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8;lineage6.3.1 | 1 |
| lineage1.2.1.2.1;lineage3 | 1 |
| lineage4.9 | 18 |
| lineage4.1.3;lineage6.3.1 | 4 |
| La1.5 | 8 |
| La1.8.1;La3 | 1 |
| lineage6.1.1;lineage6.2 | 1 |
| La1.7.X-unk4 | 83 |
| lineage6.1.1;lineage6.1.3 | 1 |
| lineage2.1;lineage4.9 | 6 |
| lineage5.1 | 73 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 2 |
| La1.2;La2 | 1 |
| lineage1.1.2;lineage1.1.3.3 | 7 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.1.2.1 | 7 |
| La1 | 8 |
| lineage1.1.2;lineage1.2.2.2 | 13 |
| lineage4.9;lineage6.3 | 6 |
| lineage1.1.1.1;lineage2.2.1 | 27 |
| lineage1.1.2;lineage4.1.2.1 | 4 |
| La1.7.X-unk5 | 13 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.2;lineage4.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage1.2.2.2;lineage4.1.1.1 | 2 |
| lineage1.2.2.2;lineage4.1.1.3 | 2 |
| lineage5.1.5 | 22 |
| lineage1.1.2;lineage1.1.3 | 1 |
| lineage2.2.1 | 4 |
| lineage1.1.2;lineage3 | 15 |
| La3;M.canetti;lineage2.1;lineage4.9 | 8 |
| lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 | 1 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| lineage1.2.2 | 34 |
| La1.2;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage3.1.2;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.3 | 2 |
| lineage1.1.3.1;lineage3 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage1.1.2;lineage2.2.1 | 17 |
| lineage1.2.2.2;lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.2.2.1;lineage2.2.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.2.2.1;lineage4 | 4 |
| lineage1.2.1;lineage2.2.1;lineage4;lineage6.3 | 1 |
| lineage6.1.3;lineage6.3.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage1.1.2;lineage3.1.2 | 4 |
| La3;M.canetti | 11 |
| La1.1;lineage1.2.2.2 | 1 |
| lineage1.2.2.1;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| lineage1.2.2.1;lineage4.9.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| lineage1.2.1.2.1;lineage2.2.1 | 8 |
| lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
| lineage4.1.3;lineage5.1.1 | 1 |
| lineage1.1.3.1;lineage1.2.2.2 | 3 |
| lineage1.1.1.1;lineage2.2.1.1 | 5 |
| La2;M.canetti | 1 |
| lineage1.1.2;lineage1.1.3.1 | 6 |
| lineage2.2.1;lineage6.1.3 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage1.1.1;lineage2.2.1 | 8 |
| lineage1.1.1.1;lineage4.2.2 | 1 |
| lineage1.1.3.1;lineage4.7 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.2;lineage4.1.2.1 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage1.1.3.1;lineage2.2.1.2 | 1 |
| lineage1.1.3.2;lineage1.2.2.2 | 4 |
| lineage1.1.3.2;lineage4.1.1.3 | 2 |
| lineage1.1.2;lineage2.2.1.1 | 2 |
| lineage1.2.2.2;lineage4.1.2 | 2 |
| lineage1.1.1.1;lineage4.2.1 | 1 |
| lineage1.2.1.2.1;lineage4.4.2 | 1 |
| lineage1.1.1.1;lineage6.1.3 | 1 |
| lineage4;lineage6.3.1 | 4 |
| La3;lineage1.1.2 | 1 |
| lineage1.2.2.2;lineage3.1.2 | 1 |
| lineage1.2.1.2;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.1.1.1;lineage4.8 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 2 |
| lineage1.2.1.2.1;lineage4.1.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 2 |
| lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage1.1.3;lineage4 | 1 |
| lineage1.1.1;lineage4.8 | 1 |
| La1.2.BCG;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage5.1.1;lineage5.1.2;lineage6.3.1 | 1 |
| lineage1.2.2.1;lineage4.1.1.1 | 1 |
| La1.6;lineage4 | 2 |
| lineage1.2.2.2;lineage4.1;lineage4.3.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| La1.8.1;lineage4.9 | 2 |
| lineage1.2.1.2.1;lineage4.1.2 | 1 |
| lineage6.1.1;lineage6.3.1 | 1 |
| lineage1.1.2;lineage1.1.3.2 | 1 |
| lineage1.1.2;lineage2.2.1.2 | 1 |
| lineage1.1.3.2;lineage4.3.4.2.1 | 4 |
| lineage1.1.2;lineage4.8 | 3 |
| lineage1.1.3.1;lineage2.2.1 | 3 |
| lineage4.3.4.1;lineage6.1.1 | 1 |
| lineage2.2.1.2;lineage4.3.4.2 | 1 |
| lineage2.2.1.1;lineage6.1.2 | 1 |
| La3;lineage2 | 1 |
| La1.2;lineage3 | 1 |
| lineage4.7 | 1 |
| lineage1.1;lineage4 | 1 |
| lineage1.2.2.2;lineage4.8 | 2 |
| lineage1.2.1.2;lineage4.5 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.9 | 4 |
| lineage1.1.2;lineage3;lineage4 | 1 |
| lineage4;lineage6.1.3 | 1 |
| lineage4.1.2.1;lineage5.3 | 1 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage4.1 | 2 |
| lineage1.1.2;lineage4.3.2.1 | 2 |
| lineage2.2.1;lineage5 | 1 |
| La1.6;lineage4.1 | 1 |
| lineage1.1.3.2;lineage3.1.1 | 3 |
| lineage1.1.3.3;lineage4 | 1 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| La1;lineage1.1.2 | 2 |
| lineage4.1.3;lineage6.2.1 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage1.2.1.2.1;lineage2.2.2;lineage4.1.2;lineage4.2.2 | 1 |
| lineage1.1.3.1;lineage1.2.1.2.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage6.1.3;lineage6.2.2 | 1 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 2 |
| La1.2.BCG;La1.8.1;lineage4 | 1 |
| La1.2;La1.7.1 | 1 |
| lineage1.1.2;lineage3.1.1 | 7 |
| lineage1.2.2.2;lineage4.3.3 | 3 |
| lineage4;lineage6.2.2 | 1 |
| lineage1.1.3;lineage1.2.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage1.1.2;lineage4.4 | 1 |
| La3;lineage2.2.1 | 3 |
| lineage1.1.3.1;lineage3;lineage4.4.2 | 1 |
| La1.1;lineage3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage1.2.2.1;lineage4.3.4.2.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage6.1 | 2 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage4.1.2.1;lineage6.2.3 | 1 |
| lineage1.1.3.2;lineage4 | 4 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1;lineage4 | 1 |
| lineage1.2.1.2.1;lineage4.3 | 1 |
| lineage1.1.3.2;lineage3.1.1;lineage4 | 1 |
| La1.8;lineage1.2.2.2 | 1 |
| lineage4.1;lineage6.1.3 | 1 |
| lineage1.1.3.1;lineage3.1 | 1 |
| lineage2.2.1.1;lineage4.1;lineage6.1.2 | 1 |
| lineage1.1.3.2;lineage2.2.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1;lineage6.3.2 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.2.1;lineage6.3.1 | 4 |
| lineage1.1.2;lineage4.1.1.3 | 4 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 3 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage6.2 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| La1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1;lineage3.1.1;lineage4;lineage5.1 | 1 |
| La1.2.BCG;lineage1.1.1 | 1 |
| lineage1.2.2.1;lineage4.8.1 | 1 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2 | 1 |
| La2;lineage4.9 | 2 |
| lineage1.1.1.1;lineage2.2 | 1 |
| lineage1.1.2;lineage4.3.3 | 1 |
| lineage1.1.3.2;lineage4.1.2 | 1 |
| lineage4.8;lineage5.1.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.3.4 | 1 |
| lineage5.1.5;lineage6.1.1 | 1 |
| lineage2.2.1.1;lineage6.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La2;lineage4 | 1 |
| lineage1.1.2;lineage4.3.4.2.1 | 2 |
| lineage4.3.4.2;lineage6.1.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.3;lineage1.2.1.2.1 | 1 |
| lineage1.1.1;lineage4.2.2 | 1 |
| lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage4.1.2.1;lineage6.1.3 | 1 |
| La1.2.BCG;La1.8.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage1.1.2;lineage4.7 | 1 |
| lineage1.1;lineage1.2.2.2 | 1 |
| lineage4.1;lineage6.3.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage4.2.2.1;lineage5 | 2 |
| lineage1.2.1.1;lineage4.1.1.1 | 1 |
| lineage1.1.2;lineage4.1.2;lineage4.3.4.2.1 | 1 |
| lineage1.2.2.2;lineage4.2 | 1 |
| lineage1.2.1.2.1;lineage4.5 | 1 |
| lineage5.1.1;lineage6.3.1 | 1 |
| lineage1.1.3;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage1.1.1.1;lineage4.1.2.1 | 1 |
| lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage1.1.3.2;lineage4.3.4.2 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.2.2;lineage6 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.2.1.2;lineage3 | 1 |
| lineage1.1.1.1;lineage4.4.2 | 1 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| lineage4.3.3;lineage6.2.2 | 1 |
| lineage5.1.1;lineage5.1.2 | 1 |
| La1.2;La1.8.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.6.2.2;lineage6.3.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.2.1.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1.2.2.2;lineage3.1.2.1 | 1 |
| lineage1.2.2.1;lineage4.3.4.2 | 1 |
| lineage4.1.2.1;lineage6.1.1 | 2 |
| lineage1.1.1.1;lineage2.2.1;lineage4.2.2 | 1 |
| lineage1.1.1;lineage2.2.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage1.1.2;lineage4.2.2 | 1 |
| lineage1.2.2;lineage3.1.2 | 1 |
| lineage4.7;lineage6.3.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2 | 1 |
| lineage1.1.1;lineage2.2.1.2 | 1 |
| lineage1.2.1.2.1;lineage4.3.4.1 | 1 |
| lineage4;lineage6.2.1 | 1 |
| La1.7.1;La1.8.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29715 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 29715 rows and could cause your browser to crash if rendered.
