Rv2245 - c.18C>T
Drug resistance types
10810 Sensitive
243 RR-TB
1864 HR-TB
1454 MDR-TB
273 Pre-XDR-TB
21 XDR-TB
10155 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.2.1 | 2697 |
| lineage1.1.2 | 3257 |
| lineage1.1.1 | 953 |
| 512 | |
| lineage1.2.1.2 | 425 |
| lineage1.1.1.1 | 1370 |
| lineage1.2.2.1 | 361 |
| La1.8.1 | 5959 |
| lineage1.2.2 | 48 |
| lineage5.1.1 | 194 |
| La1.2.BCG | 372 |
| lineage6 | 287 |
| lineage1.1.3.3 | 160 |
| lineage1.2.2.2 | 1937 |
| La3 | 134 |
| lineage1.1.3.1 | 828 |
| lineage1.1.3.2 | 413 |
| lineage1.1.3 | 197 |
| lineage5.1.2 | 65 |
| lineage5.1.3 | 37 |
| lineage5.1.4 | 69 |
| lineage4.7 | 1 |
| lineage7 | 74 |
| lineage4.7;lineage1.1.3.1 | 1 |
| lineage5.3 | 30 |
| La1.5 | 6 |
| lineage6.3.1 | 271 |
| La1.7.X-unk4 | 77 |
| lineage4.1.1.3;lineage1.1.2 | 2 |
| lineage5.2 | 61 |
| lineage4;lineage1.2.1.1 | 2 |
| lineage3;lineage1.2.2.2 | 11 |
| La1.7.1 | 769 |
| lineage6.2.2 | 64 |
| lineage4;lineage1.1.2 | 11 |
| lineage1.2.1.1 | 166 |
| lineage4.1.1.3;lineage1.2.2.2 | 2 |
| La1.4 | 110 |
| lineage4;lineage1.2.2.2 | 7 |
| lineage9 | 32 |
| La2 | 248 |
| lineage5.1.5 | 15 |
| lineage6.2.1 | 27 |
| lineage5.1 | 33 |
| lineage6.1.2 | 22 |
| La1.2 | 583 |
| lineage5 | 50 |
| lineage6;lineage4.6.2.2 | 1 |
| lineage6.3.1;lineage5.1.2 | 1 |
| lineage6.3.1;lineage5.1.2;lineage5.1.1 | 1 |
| lineage6.1.1 | 198 |
| lineage6.1.3 | 211 |
| lineage5.3;lineage4.1.2.1 | 1 |
| lineage5.1.2;lineage5.1.1 | 1 |
| lineage4 | 25 |
| La1.6 | 137 |
| lineage4.3.4.2.1;lineage1.2.2.2 | 2 |
| La1.8 | 16 |
| lineage6.3.3 | 37 |
| lineage4.9 | 35 |
| lineage6.3.2 | 26 |
| lineage4.9;La1.8.1 | 7 |
| lineage4.9;La1.8 | 6 |
| lineage6.3 | 1 |
| lineage6.2.3;lineage4.1.2.1 | 2 |
| lineage5.1.1;lineage4.8 | 2 |
| lineage6.2.3 | 99 |
| La1 | 18 |
| lineage4.1.3;lineage1.1.2 | 2 |
| lineage1.1 | 38 |
| lineage2.2.1 | 13 |
| La3;La1.8.1 | 1 |
| lineage1.2.2.2;lineage1.1.2 | 9 |
| lineage1.1.3.3;lineage1.1.2 | 6 |
| lineage1 | 34 |
| lineage3;lineage1.1.2 | 13 |
| lineage2.2.1;lineage1.1.3 | 1 |
| lineage2.2.1;lineage1.1.2 | 15 |
| La1.8.2 | 256 |
| lineage4.1.2.1;lineage1.1.2 | 4 |
| La1.7 | 33 |
| lineage2.2.1.1 | 1 |
| La1.3 | 142 |
| La1.1 | 9 |
| lineage4.3.2.1;lineage1.2.2.2 | 3 |
| lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.1;lineage1.1.1.1 | 3 |
| lineage1.2.2.2;La1.3 | 9 |
| lineage4;La1.2.BCG | 1 |
| lineage2.2.1;lineage1.1.1.1 | 23 |
| lineage2.2.1;lineage1.2.2.2 | 15 |
| lineage4.4.1.1;lineage3;lineage1.2.2.2 | 1 |
| lineage4;lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage3;lineage1.1.3.1 | 2 |
| lineage2.2.1;lineage1.1.1 | 7 |
| lineage4.3.3;lineage1.2.2.2 | 2 |
| lineage4.3.3;lineage1.1.3.1 | 1 |
| lineage1.2.2.2;lineage1.1.3.1 | 3 |
| lineage4.1.2.1 | 10 |
| lineage4.3;lineage1.2.1.2.1 | 1 |
| lineage4.8;lineage1.2.2.2 | 2 |
| lineage3.1.2;lineage1.2.2.2 | 1 |
| lineage4.9;lineage1.1.2 | 1 |
| lineage4.1;lineage1.1.2 | 1 |
| lineage1.1.2;La1 | 2 |
| lineage4.1.2;lineage1.1.2 | 1 |
| lineage3.1.1;lineage1.1.2 | 7 |
| lineage2.2 | 8 |
| lineage4.2.2.2;lineage1.1.3 | 1 |
| lineage3;lineage1 | 1 |
| lineage4.1.1.1;lineage1.2.2.2 | 2 |
| lineage1.1.3.1;lineage1.1.2 | 2 |
| lineage2.2.1.2;lineage1.1.3.1 | 1 |
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage4.1.2;lineage1.2.1.2.1 | 1 |
| lineage3.1 | 2 |
| lineage6.2.1;lineage4.1.3 | 1 |
| La1.7.X-unk5 | 9 |
| lineage6.3.1;lineage4.1.3 | 4 |
| lineage6.3.1;lineage4.1 | 2 |
| lineage5.1.1;lineage4.1.3 | 1 |
| lineage6.3.1;lineage4 | 2 |
| lineage6.3;lineage4 | 1 |
| lineage6.3.1;lineage4.6.2.2 | 1 |
| lineage6.3.1;lineage4.1.2.1 | 4 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2;lineage4.1.2;lineage2.2.2;lineage1.2.1.2.1 | 1 |
| lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | 1 |
| lineage4.6.1 | 1 |
| lineage4;lineage3.1.1;lineage1 | 1 |
| lineage6.3;lineage4;lineage2.2.1;lineage1.2.1 | 1 |
| lineage6.1.2;lineage2.2.1.1 | 1 |
| lineage6.1.2;lineage4.1 | 1 |
| lineage4.3.4.2;lineage2.2.1.2 | 1 |
| lineage6.1.3;lineage2.2.1.1 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.8;lineage1.1.2 | 3 |
| lineage4.8.1;lineage1.2.2.2 | 1 |
| lineage6.3.3;lineage6.1.3 | 1 |
| lineage2.2.1.1;lineage1.2.2.1 | 1 |
| lineage4.8.1;lineage1.2.2.1 | 1 |
| lineage6.1;lineage4.2.2 | 1 |
| lineage5;lineage4.2.2.1 | 1 |
| lineage3.1.2;lineage1.1.2 | 3 |
| lineage4.8 | 4 |
| lineage1.2.1 | 55 |
| lineage8 | 4 |
| lineage1.2.1.2.1;La1.1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4;La1.8.1 | 2 |
| lineage6.1 | 7 |
| lineage4.6.2.2 | 3 |
| lineage6.2 | 8 |
| lineage6.2;lineage6.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.1.1;lineage1.2.1.1 | 1 |
| lineage3;lineage1.2.1.2.1 | 1 |
| lineage4;La1 | 1 |
| lineage6;lineage4.9 | 1 |
| lineage4.3.4.2;lineage1.1.3.2 | 1 |
| lineage4;La1.3 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage4.4.2;lineage3;lineage1.1.3.1 | 1 |
| lineage4;lineage1.1.3.3 | 1 |
| lineage4;lineage3;lineage1.1.2 | 1 |
| lineage4.4;lineage4.3.4.2.1;lineage1.1.2 | 1 |
| lineage2 | 3 |
| lineage4.4;lineage1.1.2 | 1 |
| lineage4.1.2;lineage1.2.2.2 | 2 |
| lineage6.1.3;lineage2.2.1 | 2 |
| lineage6.2.2;lineage4.3.3 | 1 |
| lineage2.2.1;lineage1.2.1.2.1 | 6 |
| lineage3.1.2 | 1 |
| lineage4.4.2;lineage1.1.1.1 | 2 |
| lineage2.2.1.1;lineage1.1.1.1 | 3 |
| lineage4.2.2;lineage1.1.1 | 1 |
| lineage3 | 2 |
| lineage2.2.1.2;lineage1.1.1 | 1 |
| lineage4.3.4.2.1;lineage1.1.2 | 2 |
| La1.8.2;La1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4 | 3 |
| lineage4.8;lineage1.1.1.1 | 1 |
| lineage2;lineage1.1.2 | 1 |
| lineage4.2;lineage1.2.2.2 | 1 |
| lineage4.7;lineage1.1.2 | 1 |
| lineage4.1.1;lineage1.2.2.1 | 1 |
| lineage3;lineage1.2.1.2 | 1 |
| lineage4;lineage1.2.2.1 | 4 |
| lineage6.1.3;lineage1.1.1.1 | 1 |
| lineage6.3.1;lineage4.6.2.2;lineage4.1.2.1 | 1 |
| lineage6.1.1;lineage4.1.2.1 | 2 |
| lineage6.3.1;lineage4.7 | 1 |
| lineage4.6.2.2;lineage4.1.1.3;lineage1.1.1 | 1 |
| lineage4.1.2.1;lineage1.1.1.1 | 1 |
| lineage6.1.1;lineage4.3.4.1 | 1 |
| lineage6.1.3;lineage4.3.4.2 | 1 |
| lineage6.1.2;lineage4.6.2.2 | 1 |
| lineage6.3.1;lineage4.8 | 1 |
| lineage6.1.2;lineage4.6.2.2;lineage4.3.4.1 | 1 |
| lineage6.1.1;lineage5.1.5 | 1 |
| lineage6;lineage4.1.2.1 | 1 |
| lineage6.1.3;lineage6.1.1 | 1 |
| lineage6.3.2;lineage4.1.2.1 | 1 |
| lineage6;lineage4.1 | 1 |
| lineage6;lineage4 | 1 |
| lineage6.2;lineage6.1.3 | 1 |
| lineage6.2;lineage6.1.1 | 1 |
| lineage4.3.2.1;lineage1.1.2 | 2 |
| lineage4.1;La1.6 | 1 |
| lineage1.2.2;lineage1.1.2 | 1 |
| lineage2.2.1;lineage1.1 | 1 |
| lineage4.1.2;lineage1.2.2.1 | 4 |
| lineage2.2.1;lineage1.2.2 | 1 |
| lineage2.2;lineage1.1.2 | 1 |
| lineage1.2.2;lineage1.1 | 1 |
| lineage3.1.2;lineage1.1.3.1 | 1 |
| lineage3.1.2;lineage1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.1;lineage1.2.1.2.1 | 1 |
| lineage4;lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage1.1 | 3 |
| lineage4;lineage1.1.3.1 | 1 |
| lineage4;lineage1.1 | 2 |
| lineage4;lineage1.1.1 | 2 |
| lineage4.3.3 | 1 |
| lineage3;La1.2 | 1 |
| lineage3.1.2.1 | 1 |
| La1.8.2;La1.2.BCG | 1 |
| La1.8.X-unk6 | 7 |
| lineage4.5 | 1 |
| lineage4.6.1.1;lineage3.1.1;lineage1.1.2 | 1 |
| lineage4.2.2.2;lineage3.1.1;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4;lineage3.1.1;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4;lineage3.1.1 | 1 |
| lineage4.2.2.2;lineage3.1.1;lineage1.1.2 | 1 |
| lineage4.6.1.1;lineage4.3;lineage3.1.1;lineage1.1.2 | 1 |
| lineage4.6.1;lineage3.1.1;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4.9.1;lineage4.3.4.2;lineage4.3.3 | 1 |
| lineage4.3.4;lineage3.1.1;lineage1.1.2 | 1 |
| lineage2.2.1;lineage1.1.3.1 | 2 |
| lineage4;lineage3;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage3.1.2;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4;lineage3;lineage2.2.1;lineage1 | 1 |
| lineage2.2.1.1;lineage1.1.2 | 1 |
| lineage3;lineage2.2.1;lineage1.2.2.2 | 3 |
| lineage3;lineage2.2.1;lineage1.1.3.3 | 1 |
| lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 | 2 |
| lineage3;lineage2.2.1;lineage1.1.2 | 2 |
| lineage4.1.2.1;lineage1.2.1.2.1 | 1 |
| lineage4.1.2.1;lineage1.2.2.2 | 1 |
| lineage4.2.1;lineage1.1.1.1 | 1 |
| lineage4;lineage1.1.3.2 | 3 |
| lineage4.9;lineage1.2.2.2 | 3 |
| lineage4.9;lineage1.2.2 | 2 |
| lineage2.2;lineage1.1.1.1 | 1 |
| lineage2.2.1.1;lineage1.1.1 | 1 |
| lineage3.1;lineage2.2.1;lineage1.1.2 | 1 |
| lineage2.2.1;La3 | 2 |
| lineage4.2.2;lineage1.1.1.1 | 1 |
| lineage1.1.2;lineage1.1.1.1 | 1 |
| lineage1.2.1.2.1;lineage1.1.1.1 | 1 |
| lineage4.5;lineage1.2.1.2.1 | 1 |
| lineage4.2.2;lineage2.2.1;lineage1.1.1.1 | 1 |
| lineage1.2.1.2.1;lineage1.1.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage2.2.1;lineage1.1.2 | 1 |
| lineage3.1.2;lineage1.1.3.2 | 1 |
| lineage4.9;lineage3;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.3.3;lineage1.1.2 | 1 |
| lineage3.1.2.1;lineage1.2.2.2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2.2.1.2;lineage1.1.2 | 1 |
| lineage4.2.2.2;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.1 | 2 |
| lineage4.9;La1.2 | 1 |
| lineage4;La1.8.1;La1.2.BCG | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage4.2.2;lineage1.1.2 | 1 |
| lineage2.2.1;lineage1.2.1.2 | 1 |
| lineage4.3 | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage4.3.4.2.1;lineage1.1.3.2 | 4 |
| lineage3;La1.1 | 1 |
| lineage4.4.2;lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3;lineage1.1.3.2 | 2 |
| lineage4.3.4.2;lineage1.2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2;lineage1.1.2 | 1 |
| lineage4.8;lineage1.1.1 | 1 |
| lineage4;lineage3.1.1;lineage1.1.3.2 | 1 |
| lineage4.1.2.1;lineage1.1.3.2 | 1 |
| lineage1.2.2.2;lineage1.1.3.2 | 4 |
| lineage3.1.1 | 1 |
| lineage3.1.1;lineage1.1.3.2 | 3 |
| lineage4.3.4.2.1;lineage4.1.2;lineage1.1.2 | 1 |
| lineage4.1.2;lineage1.1.3.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1;lineage1 | 1 |
| M.orygis | 1 |
| lineage1.1.3.2;lineage1.1.2 | 1 |
| lineage1.2.2.2;lineage1.1.3 | 1 |
| lineage1.1.3.3;lineage1.1.1 | 1 |
| lineage1.2.1.2.1;La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24820 |
Geographic prevalence
Country level data for this variant is available for 5461 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 24820 rows and could cause your browser to crash if rendered.
