Rv2245 - c.33C>T
Drug resistance types
136 Sensitive
1 RR-TB
15 HR-TB
25 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
89 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.2 | 3 |
| La1.8.1 | 36 |
| La1.7.1 | 10 |
| lineage1.2.1.2.1 | 6 |
| lineage3 | 16 |
| lineage4.6.1.1 | 2 |
| lineage4.1.2 | 2 |
| La1.3 | 1 |
| lineage4.6.2.2 | 6 |
| lineage4.1.2.1 | 20 |
| lineage4.8;lineage4.3.3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1.1 | 5 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.4.1.1 | 5 |
| lineage4.1 | 1 |
| lineage4.8 | 14 |
| lineage4.3.4 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.3.1 | 21 |
| lineage1.2.2.2 | 15 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 25 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage1.1.2 | 6 |
| lineage4.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1 | 1 |
| lineage1.1.3 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.5 | 1 |
| lineage1.1.3.3 | 2 |
| lineage6.3.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 6 |
| lineage3.1.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.9 | 10 |
| 8 | |
| lineage4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage5.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage5.1.2 | 1 |
| La1.6 | 2 |
| La2 | 4 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 56 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15296921 | Other | La1.8.2 | None | SRR15296925 | Other | La1.8.1 | None | SRR15296923 | Other | La1.7.1 | None | SRR15296924 | Other | La1.7.1 | None | SRR15296927 | Other | La1.8.2 | None | SRR15296942 | Other | La1.8.1 | None | SRR15296932 | Other | La1.8.1 | None | SRR15296948 | Other | La1.8.2 | None | SRR16058030 | Sensitive | lineage1.2.1.2.1 | None | SRR15296962 | Other | La1.7.1 | None | SRR16370272 | Sensitive | lineage3 | None | SRR16058515 | Sensitive | lineage4.6.1.1 | None | SRR1640541 | Sensitive | lineage4.1.2 | ca | SRR1791711 | Other | La1.3 | None | SRR1791787 | Other | La1.8.1 | None | SRR1791767 | Other | La1.8.1 | None | SRR1791796 | Other | La1.8.1 | None | SRR1792420 | Other | La1.8.1 | None | SRR1791867 | Other | La1.7.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792264 | Other | La1.7.1 | None | SRR1792349 | Other | La1.8.1 | None | SRR1791789 | Other | La1.8.1 | None | SRR1791911 | Other | La1.8.1 | None | SRR1792132 | Other | La1.8.1 | None | SRR1792412 | Other | La1.8.1 | None | SRR21658639 | Sensitive | lineage4.6.2.2 | None | SRR1792465 | Other | La1.8.1 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR19325523 | Sensitive | lineage1.2.1.2.1 | None | SRR21658556 | Sensitive | lineage4.8;lineage4.3.3 | None | SRR21658638 | Sensitive | lineage4.2.1.1 | None | SRR18391668 | Other | La1.7.1 | None | SRR18914228 | Sensitive | lineage1.1.1.1 | None | SRR2101361 | Sensitive | lineage4.4.1.1.1 | None | SRR2101429 | Sensitive | lineage4.3.2.1 | None | SRR2101495 | MDR-TB | lineage4.4.1.1 | None | SRR21657656 | Sensitive | lineage1.2.1.2.1 | None | ERR551069 | HR-TB | lineage4.1 | None | SRR22048368 | Sensitive | lineage4.1.2.1 | None | ERR11243473 | Sensitive | lineage4.8 | None | ERR553164 | HR-TB | lineage4.1.2.1 | None | ERR551254 | Sensitive | lineage4.1.2.1 | None | ERR551176 | HR-TB | lineage4.3.4 | None | ERR552081 | Sensitive | lineage4.3.3 | None | ERR553166 | HR-TB | lineage4.1.2.1 | None | SRR6650135 | Sensitive | lineage1.1.3.1 | None | SRR6650119 | Sensitive | lineage1.1.3.1 | None | SRR6650385 | Other | lineage1.2.2.2 | None | SRR6650168 | Sensitive | lineage4.3.4.2 | None | SRR6650303 | Other | lineage2.2.1 | None | SRR6650220 | Other | lineage3 | None | SRR6650114 | Sensitive | lineage1.2.2.2 | None | SRR6650350 | Other | lineage3 | None | SRR6650361 | Sensitive | lineage3 | None | SRR6650390 | Sensitive | lineage4;lineage1.2.2.1 | None | SRR6797635 | Other | lineage2.2.1 | None | SRR6650428 | Sensitive | lineage1.2.2.2 | None | SRR6797467 | Sensitive | lineage1.1.3.1 | None | SRR6797656 | MDR-TB | lineage1.1.2 | None | SRR6797513 | Sensitive | lineage1.2.2.2 | None | SRR6797628 | Sensitive | lineage4.1.1 | None | SRR6797713 | Sensitive | lineage4.3.4.1 | None | SRR6797833 | MDR-TB | lineage1 | None | SRR6797862 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797870 | Sensitive | lineage1.1.3 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR6650111 | Sensitive | lineage1.2.2.2 | None | SRR6650198 | Other | lineage3 | None | SRR6650283 | Sensitive | lineage3 | None | SRR6650235 | Other | lineage3 | None | SRR6650285 | Sensitive | lineage4.8 | None | SRR6650368 | Sensitive | lineage1.2.2.2 | None | SRR6650345 | Other | lineage1.1.3.1 | None | SRR6650392 | Sensitive | lineage2.2.1 | None | SRR6797307 | Other | lineage4.8 | None | SRR6650319 | Sensitive | lineage1.1.3.1 | None | SRR6650391 | Sensitive | lineage1.1.3.1 | None | SRR6650404 | Sensitive | lineage2.2.1 | None | SRR6797640 | MDR-TB | lineage2.2.1 | None | SRR6797594 | Sensitive | lineage1.2.2.2 | None | SRR6650227 | Sensitive | lineage1.1.3.1 | None | SRR6797811 | MDR-TB | lineage1.2.2.2 | None | SRR6650210 | Sensitive | lineage1.1.3.1 | None | SRR6650103 | Other | lineage1.1.3.1 | None | SRR6650401 | Sensitive | lineage1.2.2.2 | None | SRR6650302 | Sensitive | lineage3 | None | SRR6650299 | Other | lineage1.1.3.1 | None | SRR6650399 | Sensitive | lineage4.1.2.1 | None | SRR6797377 | Other | lineage4.8 | None | SRR6797476 | Other | lineage1.2.2.2 | None | SRR6797501 | Sensitive | lineage4.2.2.2 | None | SRR6797505 | Sensitive | lineage1.1.3.1 | None | SRR6797447 | Sensitive | lineage1.2.2.2 | None | SRR6797502 | Sensitive | lineage4.5 | None | SRR6797689 | Sensitive | lineage1.1.3.3 | None | SRR6797585 | Sensitive | lineage1.1.3.1 | None | SRR6797567 | Sensitive | lineage1.1.3.1 | None | SRR6797680 | Sensitive | lineage1.1.3 | None | SRR6797703 | HR-TB | lineage1.1.3.1 | None | ERR4815223 | Sensitive | lineage6.3.1 | None | SRR6797748 | Sensitive | lineage2.2.1.1 | None | SRR6797720 | Sensitive | lineage2.2.1.1 | None | ERR4814345 | Sensitive | lineage3 | None | SRR3085351 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR3082112 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR3085283 | Sensitive | lineage4.8 | None | ERR1750913 | Sensitive | lineage4.1.1.3 | za | SRR3091253 | Other | La1.8.1 | None | SRR3091234 | Other | La1.8.1 | None | ERR1679585 | MDR-TB | lineage4.6.2.2 | None | ERR4815367 | Other | lineage3.1.1 | None | ERR552765 | MDR-TB | lineage4.4.1.1 | sz | ERR1679640 | Sensitive | lineage4.6.2.2 | None | ERR1679647 | Sensitive | lineage4.6.2.2 | None | ERR553186 | MDR-TB | lineage4.1.1.3 | sz | ERR1750926 | Other | lineage4.3.2.1 | za | ERR1750942 | Sensitive | lineage4.8 | za | ERR1750940 | Sensitive | lineage2.2.1.1 | za | ERR1750927 | Other | lineage4.3.2.1 | za | ERR1750938 | Other | lineage4.4.1 | None | ERR1750925 | Sensitive | lineage4.3.2.1 | za | ERR4814875 | Other | lineage4.1.2.1 | None | ERR552728 | Sensitive | lineage4.8 | None | ERR4814955 | Sensitive | lineage4.9 | None | ERR4815838 | Sensitive | lineage3 | None | ERR4815102 | Sensitive | lineage2.2.1 | gb | ERR3275338 | Sensitive | lineage4.8 | nl | ERR4816083 | Sensitive | None | ERR4816128 | Sensitive | lineage4.8 | gb | ERR552987 | MDR-TB | lineage4.4.1.1 | sz | SRR3732574 | HR-TB | lineage4.1.2.1 | None | ERR552647 | Sensitive | lineage4.1.2.1 | None | ERR4816327 | Sensitive | lineage1.1.2 | gb | ERR4816433 | HR-TB | None | ERR4818743 | Other | lineage4.9 | None | ERR551112 | Sensitive | None | ERR4818736 | Sensitive | lineage1.2.2.2 | None | DRR185114 | Sensitive | lineage1.1.1.1 | vn | ERR4818261 | Other | lineage1.1.2 | None | ERR2513529 | Sensitive | lineage4.2.1 | None | ERR2510867 | Pre-XDR-TB | lineage4.1.2.1 | it | ERR2512449 | Sensitive | lineage3 | gb | SRR5073604 | Sensitive | lineage1.1.1 | vn | ERR4818556 | Other | lineage3 | None | SRR5007180 | Other | None | ERR4819061 | Other | lineage4.1.2.1 | None | ERR2513702 | Sensitive | lineage4.9 | gb | ERR552397 | Sensitive | lineage4.4.1.1 | sz | ERR2516357 | MDR-TB | lineage4.8 | be | ERR552836 | Sensitive | lineage4.1.2.1 | None | SRR5216777 | Other | La1.8.1 | None | SAMEA2533809 | Sensitive | lineage4.1.2.1 | None | ERR2517155 | Sensitive | lineage4.8 | nl | SRR5216694 | Other | La1.8.1 | None | ERR4819354 | Sensitive | lineage4.9 | None | ERR3148151 | MDR-TB | lineage4.1.1.3 | None | SRR5216915 | Other | La1.8.1 | None | ERR551942 | Sensitive | lineage4.1.1.3 | None | ERR551938 | MDR-TB | lineage4.1.1.3 | sz | ERR4819717 | Sensitive | lineage1.1.3.3 | gb | ERR4820608 | Sensitive | lineage4.9 | None | ERR4819979 | Sensitive | lineage1.1.2 | gb | ERR552605 | Sensitive | lineage5.1 | None | ERR498352 | Sensitive | lineage4.1.2.1 | None | SRR6045462 | Sensitive | lineage1.1.2 | None | ERR4821846 | Sensitive | lineage4.9 | None | ERR4820632 | Sensitive | lineage4.4.1.1 | None | ERR4821814 | Sensitive | lineage2.2.1 | None | SRR6046105 | Sensitive | lineage4.3.3 | gb | SRR5657385 | Other | La1.8.1 | mx | SRR5657373 | Other | La1.8.1 | mx | ERR2659167 | Sensitive | None | SRR5657440 | Other | La1.8.1 | None | SRR5657390 | Other | La1.8.1 | mx | SRR5657428 | Other | La1.8.1 | mx | SRR5657393 | Other | La1.8.1 | mx | SRR5657401 | Other | La1.8.1 | mx | SRR5657423 | Other | La1.8.1 | mx | SRR5657442 | Other | La1.8.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5657449 | Other | La1.8.1 | mx | SRR5657447 | Other | La1.8.1 | mx | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821748 | Other | La1.2.BCG | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045758 | Sensitive | lineage4.3.4.2.1 | gb | SRR6045365 | Other | lineage3 | gb | SRR6046171 | Sensitive | lineage3 | None | SRR6045218 | Sensitive | lineage1.2.1.2.1 | gb | SRR6045920 | Other | lineage4.1.1 | gb | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6650364 | Other | lineage1.1.3.1 | None | SRR6650201 | Other | lineage1.1.3.1 | None | SRR6046430 | Sensitive | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046900 | Sensitive | lineage1.1.2 | None | SRR6650363 | Sensitive | lineage1.1.3.1 | None | ERR4831810 | MDR-TB | lineage2.2.1 | vn | ERR4831716 | HR-TB | lineage1.1.1.1 | None | ERR3077957 | MDR-TB | lineage4.3.4.2.1 | None | ERR4832055 | MDR-TB | lineage2.2.1 | None | SRR6650395 | Sensitive | lineage4.1.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6650410 | Sensitive | lineage1.2.2.2 | None | SRR6832163 | MDR-TB | lineage2.2 | None | SRR6797297 | Sensitive | lineage2.2.1 | None | SRR6797298 | Sensitive | lineage1.1.3.1 | None | SRR6797803 | Sensitive | lineage1.1.3.1 | None | SRR6797379 | Sensitive | lineage4.1.2 | None | ERR2446318 | Sensitive | lineage4.8 | nl | ERR3077933 | MDR-TB | lineage4.3.4.2.1 | None | ERR4831898 | MDR-TB | lineage2.2.1 | None | SRR6797817 | HR-TB | lineage1.1.3.1 | None | SRR8073629 | Other | La1.8.1 | None | SRR8073602 | Other | La1.8.1 | None | SRR9940957 | Sensitive | lineage4.9 | None | SRR8073653 | Other | La1.8.1 | None | SRR8073655 | Other | La1.8.1 | None | SRR9940976 | Sensitive | lineage4.9 | None | SRR9940973 | Sensitive | lineage4.9 | None | SRR9940992 | Sensitive | lineage4.9 | None | DRR034525 | HR-TB | lineage1.2.1.2.1 | None | SRR7782648 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8600150 | Other | La1.8.1 | None | DRR184881 | Sensitive | lineage4.2.2 | vn | DRR184954 | Sensitive | lineage4.8 | vn | DRR184891 | Other | lineage2.2.1 | vn | DRR184951 | Sensitive | lineage2.2.1 | vn | DRR185018 | Sensitive | lineage2.2 | vn | DRR184952 | Sensitive | lineage1.1.1.1 | vn | DRR184967 | HR-TB | lineage2.2.1 | vn | DRR184988 | HR-TB | lineage2.2.1 | vn | DRR184970 | Other | lineage2.2.1 | vn | DRR185037 | MDR-TB | lineage2.2.1 | vn | DRR185040 | Sensitive | lineage2.2.1 | vn | DRR185111 | Sensitive | lineage2.2.2 | vn | DRR185066 | Sensitive | lineage1.1.1.1 | vn | DRR185100 | Sensitive | lineage2.2.1 | vn | DRR185104 | HR-TB | lineage2.2.1 | vn | ERR5864460 | Pre-XDR-TB | lineage2.2.1 | None | ERR1215482 | Sensitive | lineage5.1.2 | None | ERR11043945 | Sensitive | lineage4.8 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9125367 | Sensitive | lineage4.6.1.1 | None | ERR9125356 | Sensitive | lineage1.2.1.2.1 | None | ERR9786550 | Sensitive | lineage4.1.2.1 | None | ERR9657204 | Sensitive | None | ERR9891989 | Other | lineage4.1.2.1 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | ERR9899663 | Sensitive | lineage4.6.2.2 | None | SRR11418324 | Other | La1.7.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10993952 | Other | La1.6 | None | SRR11418322 | HR-TB | La1.7.1 | None | SRR10993933 | Other | La1.6 | None | SRR11418326 | Other | La1.7.1 | None | SRR11972284 | MDR-TB | None | SRR11535174 | Other | La1.8.1 | None | SRR11871416 | Pre-XDR-TB | lineage2.2.1 | None | SRR11418334 | Other | La1.7.1 | None | SRR13888783 | Sensitive | La2 | None | SRR11972363 | MDR-TB | lineage2.2.1 | None | SRR11972439 | MDR-TB | lineage1.1.3 | None | SRR11972449 | MDR-TB | lineage2.2 | None | SRR13199733 | Other | La1.2 | None | SRR13888777 | Sensitive | La2 | None | SRR11972443 | Sensitive | lineage3 | None | SRR13888796 | Sensitive | La2 | None | SRR13888772 | Sensitive | La2 | None |
|---|
