Rv2416c - c.-8C>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
105 MDR-TB
73 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 156 |
| lineage4.3.3 | 15 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4.2.1 | 1 |
| lineage4 | 2 |
| lineage2.2.1;lineage4.3.3 | 4 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4827758 | MDR-TB | lineage2.2.1 | None | ERR551744 | MDR-TB | lineage2.2.1 | None | ERR13276385 | MDR-TB | lineage2.2.1 | None | SRR29053543 | MDR-TB | lineage2.2.1 | None | ERR11043586 | MDR-TB | lineage2.2.1 | None | SRR24710075 | MDR-TB | lineage2.2.1 | None | SRR24709882 | MDR-TB | lineage2.2.1 | None | ERR3639720 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414932 | MDR-TB | lineage2.2.1 | se | SAMN02414991 | Pre-XDR-TB | lineage4.3.3 | se | ERR4822587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822590 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822591 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822596 | Pre-XDR-TB | lineage2.2.1 | tm | SRR28706498 | MDR-TB | lineage2.2.1 | None | SRR28706624 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706397 | MDR-TB | lineage2.2.1 | None | SRR28706435 | MDR-TB | lineage2.2.1 | None | SRR28706452 | MDR-TB | lineage2.2.1 | None | ERR4822585 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822588 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822597 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822594 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | ERR4830587 | Pre-XDR-TB | lineage2.2.1 | tm | ERR7910894 | MDR-TB | lineage4.2.1 | md | ERR4830755 | MDR-TB | lineage2.2.1 | ir | ERR4830621 | MDR-TB | lineage2.2.1 | tm | ERR4830622 | MDR-TB | lineage2.2.1 | tm | ERR4830641 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830651 | MDR-TB | lineage2.2.1 | None | ERR8665827 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938616 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710063 | MDR-TB | lineage2.2.1 | None | SRR23938609 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534087 | MDR-TB | lineage2.2.1 | uz | SAMEA2534162 | MDR-TB | lineage2.2.1 | uz | SRR24710012 | MDR-TB | lineage2.2.1 | None | SRR28706686 | MDR-TB | lineage2.2.1 | None | SRR28393313 | Pre-XDR-TB | lineage4 | None | SRR28706394 | MDR-TB | lineage2.2.1 | None | SRR6832126 | MDR-TB | lineage4.3.3 | None | SAMN02419670 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | by | SRR28706556 | MDR-TB | lineage2.2.1 | None | SRR28706664 | MDR-TB | lineage2.2.1 | None | SRR1163459 | MDR-TB | lineage2.2.1 | None | SRR28706390 | MDR-TB | lineage2.2.1 | None | SRR10303276 | MDR-TB | lineage2.2.1 | None | SRR23938600 | MDR-TB | lineage2.2.1 | None | ERR551645 | MDR-TB | lineage2.2.1 | None | ERR3794417 | MDR-TB | lineage2.2.1 | None | ERR8025621 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162728 | Pre-XDR-TB | lineage4.3.3 | None | ERR3794507 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162727 | Pre-XDR-TB | lineage4.3.3 | None | SRR10430349 | MDR-TB | lineage2.2.1 | None | SRR24709885 | Pre-XDR-TB | lineage2.2.1 | None | ERR551745 | MDR-TB | lineage2.2.1 | None | ERR4822595 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4822586 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | tm | SRR13232619 | MDR-TB | lineage2.2.1 | None | SRR7646025 | Pre-XDR-TB | lineage2.2.1 | None | SRR10147710 | MDR-TB | lineage2.2.1 | None | SRR7755719 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165513 | Pre-XDR-TB | lineage4.3.3 | None | SRR1166826 | Pre-XDR-TB | lineage4.3.3 | None | ERR9806969 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706669 | MDR-TB | lineage2.2.1 | None | SRR10430362 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832814 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274764 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430353 | MDR-TB | lineage2.2.1 | None | ERR019858 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290495 | MDR-TB | lineage2.2.1 | None | SRR10303285 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938642 | MDR-TB | lineage2.2.1 | None | SRR29093568 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380234 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938694 | MDR-TB | lineage2.2.1 | None | SRR18714772 | MDR-TB | lineage2.2.1 | None | SRR21658565 | MDR-TB | lineage2.2.1 | None | SRR29539350 | MDR-TB | lineage4.3.3 | None | SRR24710140 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232787 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794437 | MDR-TB | lineage2.2.1 | None | SRR29772554 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639738 | MDR-TB | lineage2.2.1 | None | SRR29539553 | MDR-TB | lineage4.3.3 | None | ERR3794412 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303277 | MDR-TB | lineage2.2.1 | None | SRR10341356 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938658 | MDR-TB | lineage2.2.1 | None | SRR1146339 | MDR-TB | lineage2.2.1 | None | ERR13284148 | MDR-TB | lineage2.2.1 | None | SRR24710282 | MDR-TB | lineage2.2.1 | None | SRR23938702 | MDR-TB | lineage2.2.1 | None | SRR23938614 | MDR-TB | lineage2.2.1 | None | SRR24709898 | XDR-TB | lineage2.2.1 | None | SRR24709924 | MDR-TB | lineage2.2.1 | None | SRR7652976 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938593 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794364 | MDR-TB | lineage2.2.1 | None | SRR1169046 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1172073 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR13180435 | MDR-TB | lineage2.2.1 | None | SRR10430352 | MDR-TB | lineage2.2.1 | None | ERR13290497 | MDR-TB | lineage2.2.1 | None | SAMN02414992 | Pre-XDR-TB | lineage4.3.3 | se | ERR5865906 | MDR-TB | lineage2.2.1 | None | ERR11773798 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393947 | Pre-XDR-TB | lineage4 | None | SRR28706548 | MDR-TB | lineage2.2.1 | None | SRR28706528 | MDR-TB | lineage2.2.1 | None | SRR28706558 | MDR-TB | lineage2.2.1 | None | SRR28706653 | MDR-TB | lineage2.2.1 | None | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706588 | MDR-TB | lineage2.2.1 | None | SRR28706377 | XDR-TB | lineage2.2.1 | None | ERR4830589 | MDR-TB | lineage2.2.1 | tm | ERR4830604 | MDR-TB | lineage2.2.1 | tm | ERR4830629 | MDR-TB | lineage2.2.1 | tm | ERR1023407 | MDR-TB | lineage2.2.1 | None | ERR1023413 | MDR-TB | lineage2.2.1 | None | ERR4830584 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830585 | MDR-TB | lineage2.2.1 | tm | ERR4830591 | MDR-TB | lineage2.2.1 | tm | ERR4830586 | Pre-XDR-TB | lineage2.2.1 | tm | ERR4830574 | MDR-TB | lineage2.2.1 | tm | ERR4830575 | MDR-TB | lineage2.2.1 | tm | ERR2677414 | MDR-TB | lineage2.2.1 | de | ERR2516229 | MDR-TB | lineage2.2.1 | be | ERR2516183 | MDR-TB | lineage2.2.1 | be | SRR5709932 | Pre-XDR-TB | lineage2.2.1 | th | ERR017784 | Pre-XDR-TB | lineage2.2.1 | gb | SRR24710105 | MDR-TB | lineage2.2.1 | None | SRR1165605 | Pre-XDR-TB | lineage4.3.3 | None | SRR10303347 | MDR-TB | lineage2.2.1 | None | ERR551743 | MDR-TB | lineage2.2.1 | None | SRR7645829 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303354 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166928 | Pre-XDR-TB | lineage4.3.3 | None | SRR1144772 | MDR-TB | lineage2.2.1 | None | SRR24709888 | MDR-TB | lineage2.2.1 | None | SRR6832404 | MDR-TB | lineage4.3.3 | None | SRR24710185 | MDR-TB | lineage2.2.1 | None | ERR13273077 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430401 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163306 | MDR-TB | lineage2.2.1 | None | ERR13290496 | MDR-TB | lineage2.2.1 | None | SRR22351866 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260034 | MDR-TB | lineage2.2.1 | None | SRR1165491 | Pre-XDR-TB | lineage4.3.3 | None | SRR7755760 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794384 | MDR-TB | lineage2.2.1 | None | ERR13284176 | MDR-TB | lineage2.2.1 | None | ERR13284064 | MDR-TB | lineage2.2.1 | None | ERR4896321 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710206 | MDR-TB | lineage2.2.1 | None | SRR28706513 | MDR-TB | lineage4.3.3 | None | SRR29772566 | MDR-TB | lineage1.1.2 | None | ERR551745_ERR551743_ERR551744 | MDR-TB | lineage2.2.1 | None | SRR24710051 | Pre-XDR-TB | lineage2.2.1 | None | ERR13106394 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710104 | MDR-TB | lineage2.2.1 | None | SRR18715453 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706422 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794371 | MDR-TB | lineage2.2.1 | None | ERR3639714 | MDR-TB | lineage2.2.1 | None | ERR3639806 | MDR-TB | lineage2.2.1 | None | SRR23938620 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938679 | MDR-TB | lineage2.2.1 | None | SRR23938626 | XDR-TB | lineage2.2.1 | None | SRR1163172 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR13290494 | MDR-TB | lineage2.2.1 | None | SRR22351871 | MDR-TB | lineage2.2.1 | None | SRR22351869 | MDR-TB | lineage2.2.1 | None | ERR551645_ERR551644 | MDR-TB | lineage2.2.1 | None | SRR10828195 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232484 | MDR-TB | lineage2.2.1 | None | SRR1165606 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284178 | MDR-TB | lineage2.2.1 | None | SRR29772377 | Pre-XDR-TB | lineage2.2.1 | None |
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