TB-Profiler
Home
Upload
SRA data
Rv2416c
- c.-8C>A
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
105 MDR-TB
73 Pre-XDR-TB
3 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
156
lineage4.3.3
15
lineage2.2.1;lineage4.3.3
4
lineage2.2.1;lineage4.8
2
lineage4
2
lineage1.1.2
1
lineage4.2.1
1
Showing 1 to 7 of 7 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
181
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR017784
Pre-XDR-TB
lineage2.2.1
gb
ERR019858
Pre-XDR-TB
lineage2.2.1
None
ERR1023407
MDR-TB
lineage2.2.1
None
ERR1023413
MDR-TB
lineage2.2.1
None
ERR11043586
MDR-TB
lineage2.2.1
None
ERR11773798
Pre-XDR-TB
lineage2.2.1
None
ERR13106394
Pre-XDR-TB
lineage2.2.1
None
ERR13260034
MDR-TB
lineage2.2.1
None
ERR13273077
Pre-XDR-TB
lineage2.2.1
None
ERR13276385
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 181 entries
Previous
1
2
3
4
5
…
19
Next