lineage | Count |
---|---|
lineage1.2.2.2 | 4 |
lineage4.3.4.1 | 2 |
lineage4.3.4.2.1 | 18 |
La1.8.1 | 2 |
lineage3 | 5 |
lineage4.1.1.3 | 3 |
5 | |
lineage1.1.3.1 | 1 |
lineage2.2.1 | 13 |
lineage4.3.3 | 4 |
lineage4.1.2 | 4 |
lineage1.1.3.2 | 10 |
lineage3.1.1 | 12 |
lineage4.6.1.1 | 2 |
lineage4.3.2.1 | 2 |
lineage4.8 | 4 |
lineage4;lineage1.2.2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.9 | 3 |
lineage4.9.1 | 5 |
lineage1.2.2.1 | 1 |
lineage4.3.4.2 | 2 |
lineage1.1.2 | 2 |
lineage1.1.3 | 1 |
lineage4 | 1 |
lineage3.1.2 | 1 |
lineage4.8.2 | 1 |
lineage4.1.1.3.1 | 4 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | SRR6650385 | Other | lineage1.2.2.2 | None | ERR773801 | Sensitive | lineage4.3.4.1 | None | ERR779654 | Sensitive | lineage4.3.4.2.1 | None | ERR779665 | Sensitive | lineage4.3.4.2.1 | None | SRR1791838 | Other | La1.8.1 | None | SRR2101496 | Sensitive | lineage3 | None | ERR779675 | Sensitive | lineage4.1.1.3 | None | ERR779674 | Sensitive | lineage4.3.4.2.1 | None | SRR6650283 | Sensitive | lineage3 | None | ERR176771 | Sensitive | None | SRR6650366 | Sensitive | lineage1.1.3.1 | None | ERR1750907 | RR-TB | None | SRR2467265 | Sensitive | lineage3 | None | SRR2024959 | Pre-XDR-TB | lineage2.2.1 | cn | ERR181710 | HR-TB | lineage4.3.3 | mw | ERR161153 | Sensitive | lineage4.3.4.2.1 | mw | ERR133876 | Sensitive | lineage4.3.3 | ru | SRR3105793 | Pre-XDR-TB | lineage4.1.2 | None | ERR181963 | Sensitive | lineage1.1.3.2 | mw | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR181763 | HR-TB | lineage3.1.1 | mw | ERR181764 | Sensitive | lineage4.3.4.2.1 | mw | ERR181800 | Sensitive | lineage3.1.1 | mw | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR1750928 | Sensitive | lineage4.3.2.1 | za | ERR1750942 | Sensitive | lineage4.8 | za | ERR1750944 | Other | lineage4.1.2 | za | ERR176745 | Sensitive | lineage4.3.4.2.1 | mw | ERR176544 | Sensitive | lineage4.6.1.1 | None | ERR181860 | Sensitive | lineage1.2.2.2 | mw | ERR181878 | Sensitive | lineage4.3.4.2.1 | mw | ERR212151 | Sensitive | lineage4.3.4.2.1 | mw | ERR176752 | HR-TB | lineage4.3.4.2.1 | mw | ERR192070 | Other | None | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR212128 | Sensitive | lineage4.1.2 | mw | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816878 | MDR-TB | lineage4.9 | None | ERR4818018 | HR-TB | lineage2.2.1 | None | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245653 | Sensitive | lineage4.9.1 | mw | ERR245649 | Other | lineage4.8 | mw | ERR245646 | Sensitive | lineage3.1.1 | mw | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR245659 | Other | lineage4.9.1 | mw | ERR245654 | Sensitive | lineage1.1.3.2 | mw | ERR245657 | Sensitive | lineage1.1.3.2 | mw | ERR245676 | Sensitive | lineage3.1.1 | mw | ERR245667 | Sensitive | lineage4.3.4.2.1 | mw | ERR245660 | Sensitive | lineage2.2.1 | mw | ERR245664 | Sensitive | lineage4.3.4.2.1 | mw | ERR245673 | Sensitive | lineage4.3.4.2.1 | mw | ERR245672 | Sensitive | lineage1.2.2.1 | mw | ERR245670 | MDR-TB | lineage1.2.2.2 | mw | ERR245679 | Sensitive | lineage1.1.3.2 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245685 | Sensitive | lineage4.9.1 | mw | ERR245688 | Sensitive | lineage3.1.1 | mw | ERR245686 | Other | lineage4.3.4.2 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245705 | Sensitive | lineage1.1.3.2 | mw | ERR245692 | Sensitive | lineage2.2.1 | mw | ERR245695 | Sensitive | lineage1.1.3.2 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245697 | Sensitive | lineage4.3.4.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245706 | Sensitive | lineage4.3.4.2.1 | mw | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245731 | Sensitive | lineage4.9.1 | mw | ERR245719 | Sensitive | lineage4.9.1 | mw | ERR245723 | Sensitive | lineage2.2.1 | mw | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245713 | Sensitive | lineage3.1.1 | mw | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245736 | Sensitive | lineage4.9 | mw | ERR2514427 | Sensitive | lineage1.1.3 | None | ERR245767 | Sensitive | lineage4.3.4.2.1 | mw | ERR4819328 | Sensitive | lineage4.3.3 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818631 | RR-TB | lineage4 | None | ERR2514389 | Other | lineage3 | None | SRR6045289 | Other | None | ERR266607 | Sensitive | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045638 | Other | lineage3.1.2 | None | SRR6982038 | HR-TB | lineage1.1.2 | None | SRR6046308 | Sensitive | lineage4.9 | None | SRR6982184 | Sensitive | lineage4.3.2.1 | None | SRR6982302 | MDR-TB | lineage4.3.4.2.1 | None | SRR6257049 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257084 | MDR-TB | lineage2.2.1 | None | ERR046768 | Sensitive | lineage4.8.2 | gb | ERR025425 | Other | lineage4.1.2 | None | ERR040088 | Sensitive | lineage3.1.1 | gb | ERR046747 | Other | La1.8.1 | gb | ERR036198 | Other | lineage4.3.4.2 | None | ERR046798 | Sensitive | lineage4.1.1.3.1 | gb | ERR046783 | Sensitive | lineage4.1.1.3.1 | gb | ERR046853 | Sensitive | lineage4.1.1.3.1 | gb | ERR046807 | Sensitive | lineage3 | None | ERR046831 | Sensitive | lineage4.8 | gb | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046999 | Sensitive | lineage4.8 | gb | ERR046921 | Sensitive | lineage3.1.1 | gb | ERR046861 | Sensitive | lineage3.1.1 | gb | ERR046868 | Sensitive | lineage4.1.1.3 | gb | ERR046887 | Sensitive | lineage4.3.3 | gb | ERR046974 | Sensitive | lineage4.1.2.1 | gb | ERR133867 | MDR-TB | lineage2.2.1 | ru | ERR133859 | Sensitive | lineage2.2.1 | ru | ERR133927 | MDR-TB | lineage2.2.1 | ru |
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