Rv2428 - c.-77delT
Drug resistance types
0 Sensitive
1 RR-TB
11 HR-TB
33 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 25 |
| lineage3 | 22 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3082092 | MDR-TB | lineage3.1.1 | None | ERR7737646 | MDR-TB | lineage3.1.1 | None | SRR3082081 | MDR-TB | lineage3.1.1 | None | SRR7131298 | HR-TB | lineage3.1.1 | None | ERR550758 | HR-TB | lineage3 | cg | ERR4830819 | HR-TB | lineage3.1.1 | et | ERR2510817 | HR-TB | lineage3.1.1 | it | SRR1175151 | MDR-TB | lineage3 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR1367631 | HR-TB | lineage3.1.1 | None | ERR4822289 | MDR-TB | lineage3.1.1 | None | SRR1172861 | MDR-TB | lineage3 | None | SRR6964482 | RR-TB | lineage3 | None | ERR11044215 | MDR-TB | lineage3.1.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR3082093 | MDR-TB | lineage3.1.1 | None | ERR3335732 | Pre-XDR-TB | lineage3.1.2 | pk | SAMN02599090 | MDR-TB | lineage3 | None | ERR4830832 | MDR-TB | lineage3.1.1 | et | SRR5818620 | MDR-TB | lineage3.1.1 | dj | ERR4829093 | MDR-TB | lineage3.1.1 | dj | ERR4829101 | MDR-TB | lineage3.1.1 | dj | SRR1172938 | MDR-TB | lineage3 | None | ERR2515024 | HR-TB | lineage3.1.1 | gb | ERR4827707 | Other | lineage3 | None | SRR5818617 | MDR-TB | lineage3.1.1 | dj | SRR1173105 | MDR-TB | lineage3 | None | SRR7069912 | HR-TB | lineage3.1.1 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR16100708 | HR-TB | lineage3.1.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SRR12882264 | HR-TB | lineage3.1.1 | None | ERR550756 | HR-TB | lineage3 | None | ERR550757 | HR-TB | lineage3 | None | ERR2510525 | MDR-TB | lineage3 | pk | ERR2510551 | XDR-TB | lineage3 | pk | SRR1173727 | MDR-TB | lineage3 | None | SRR1173686 | MDR-TB | lineage3 | None | SAMN02599131 | MDR-TB | lineage3 | None | ERR4829106 | MDR-TB | lineage3.1.1 | dj | SRR3085342 | MDR-TB | lineage3.1.1 | None | SRR1175105 | MDR-TB | lineage3 | None | SRR5818636 | MDR-TB | lineage3.1.1 | dj | SRR3085335 | MDR-TB | lineage3.1.1 | None | SRR1173367 | MDR-TB | lineage3 | None | ERR4276852 | MDR-TB | lineage3.1.1 | None | SAMN02599130 | MDR-TB | lineage3 | None | ERR550764 | MDR-TB | lineage3.1.1 | None |
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