Rv2428 - c.564C>G
Drug resistance types
99 Sensitive
1 RR-TB
4 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 10 |
| lineage1.1.2 | 6 |
| lineage2.2.1 | 11 |
| lineage3.1.1 | 10 |
| lineage4.8 | 6 |
| lineage1.2.2.1 | 6 |
| lineage4.9 | 1 |
| lineage1.1.3.2 | 5 |
| 2 | |
| lineage1.2.2.2 | 3 |
| lineage1.1.3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.9.1 | 1 |
| lineage3 | 11 |
| lineage7 | 15 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.1.1.1 | 1 |
| La1.3 | 1 |
| lineage4.2.2.2 | 3 |
| lineage6 | 2 |
| lineage4.6 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | 1 |
| lineage4.1.1 | 3 |
| lineage4.8.2 | 4 |
| lineage3.1.2 | 4 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.4 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7.1 | 3 |
| La1.8.1 | 2 |
| lineage1.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 135 |
Geographic prevalence
Country level data for this variant is available for 91 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245691 | Sensitive | lineage1.1.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245785 | Sensitive | lineage4.9 | mw | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245782 | Sensitive | lineage1.1.3.2 | mw | ERR245783 | Sensitive | lineage2.2.1 | mw | ERR245790 | Sensitive | None | ERR245812 | Sensitive | lineage4.3.4.2.1 | mw | ERR245788 | Sensitive | lineage4.3.4.2.1 | mw | ERR245817 | Sensitive | lineage1.1.3.2 | None | ERR245819 | Other | lineage3.1.1 | None | ERR245811 | Sensitive | lineage1.2.2.1 | mw | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | ERR245825 | Sensitive | lineage1.1.3 | None | ERR245828 | Sensitive | lineage4.1.1.3 | mw | ERR245823 | Sensitive | lineage4.1.1.3 | None | ERR245813 | Sensitive | lineage1.1.2 | mw | ERR245835 | Other | lineage4.9.1 | mw | ERR245839 | Sensitive | lineage3.1.1 | mw | ERR245827 | Sensitive | lineage3.1.1 | mw | ERR245843 | Sensitive | lineage1.2.2.1 | mw | ERR245833 | Sensitive | lineage1.2.2.2 | mw | ERR245830 | Other | lineage3 | mw | ERR245838 | HR-TB | lineage3.1.1 | mw | SAMN03246213 | MDR-TB | lineage2.2.1 | cn | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | ERR1200608 | Sensitive | lineage7 | et | ERR1200636 | Other | lineage7 | et | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR233360 | Sensitive | lineage3 | None | ERR1200602 | Sensitive | lineage7 | et | ERR1200615 | Sensitive | lineage4.8 | et | ERR1200606 | Sensitive | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200607 | HR-TB | lineage3 | et | ERR1200625 | Sensitive | lineage7 | et | ERR1200634 | Sensitive | lineage7 | et | ERR1200616 | Sensitive | lineage4.1.2.1 | et | ERR233365 | Sensitive | lineage1.1.1.1 | vn | ERR1200622 | Other | La1.3 | et | ERR1200610 | Sensitive | lineage7 | et | SAMN03246215 | MDR-TB | lineage2.2.1 | cn | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR233366 | Sensitive | lineage6 | None | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR1200621 | Sensitive | lineage4.6 | et | ERR1200611 | Other | lineage4.6.3 | et | SRR671780 | MDR-TB | lineage2.2.1 | cn | ERR1200633 | Sensitive | lineage7 | et | ERR233347 | Sensitive | lineage3 | None | ERR037516 | Sensitive | lineage4.3.4.1 | mw | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | SRR857286 | MDR-TB | lineage4.3.3 | None | ERR026641 | Sensitive | lineage3 | None | ERR036188 | MDR-TB | lineage4.3.4.2.1 | mw | ERR036211 | Other | lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | None | ERR046736 | Sensitive | lineage4.1.1 | gb | ERR046743 | Sensitive | lineage4.1.1 | gb | ERR046755 | Sensitive | lineage4.8.2 | gb | ERR046770 | Sensitive | lineage3.1.1 | gb | ERR046767 | Sensitive | lineage4.8.2 | gb | ERR046779 | Sensitive | lineage3 | gb | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046796 | Pre-XDR-TB | lineage4.8 | gb | ERR046812 | Sensitive | lineage3 | None | ERR046799 | Sensitive | lineage4.1.1.3.1 | gb | ERR046836 | Sensitive | lineage4.3.4.2.1 | gb | ERR046818 | Sensitive | lineage3.1.2 | None | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046831 | Sensitive | lineage4.8 | gb | ERR046844 | Other | lineage1.2.2.1 | gb | ERR046859 | Sensitive | lineage4.1.1.3 | gb | ERR046898 | Sensitive | lineage1.2.2.1 | gb | ERR046893 | Other | lineage1.2.2.1 | gb | ERR046864 | Sensitive | lineage4.1.4 | gb | ERR046905 | Sensitive | lineage1.1.2 | gb | ERR046899 | Sensitive | lineage4.8 | None | ERR046971 | Sensitive | lineage4.1.1 | gb | ERR046914 | Sensitive | lineage3.1.1 | gb | ERR046979 | Sensitive | lineage3 | None | SRR125289 | Sensitive | lineage2.2.1.2 | None | ERR1034652 | Other | None | SRR121590 | Sensitive | lineage4.1.2.1 | None | SRR125293 | Sensitive | lineage2.2.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR1792089 | Other | La1.8.1 | None | SRR125300 | Sensitive | lineage2.2.1.2 | None | SRR1791780 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR18213914 | Sensitive | lineage4.8.2 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | SRR2100082 | Sensitive | lineage3 | None | SRR2100080 | Sensitive | lineage3.1.2 | None | SRR2100087 | Sensitive | lineage3.1.2 | None | SRR2100099 | Sensitive | lineage3 | None | ERR1200613 | Sensitive | lineage7 | et | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1200618 | Sensitive | lineage7 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | ERR1200639 | Sensitive | lineage7 | et | ERR1200609 | Sensitive | lineage3 | et | ERR233346 | Sensitive | lineage7 | None | ERR1200637 | Sensitive | lineage4.2.2.2 | et | ERR233368 | Sensitive | lineage6 | None | ERR1200631 | Sensitive | lineage7 | et | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | SAMN03246243 | MDR-TB | lineage2.2.1 | cn | ERR233369 | Other | lineage4.8 | et | SRR4019491 | Other | La1.7.1 | None | ERR1200603 | Sensitive | lineage7 | None | ERR233364 | Other | lineage1.2.2.2 | cn | SAMN03246414 | Pre-XDR-TB | lineage2.2.1 | cn | ERR234128 | Sensitive | lineage2.2.1 | cn | ERR234144 | Sensitive | lineage5.1.1 | gh | ERR234138 | Sensitive | lineage2.2.1 | cn | ERR1200605 | Other | lineage4.2.1 | et | ERR245654 | Sensitive | lineage1.1.3.2 | mw | ERR245675 | Sensitive | lineage1.1.2 | None | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR234126 | Sensitive | lineage2.2.1 | cn | ERR1200612 | Sensitive | lineage7 | et | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245657 | Sensitive | lineage1.1.3.2 | mw | ERR245666 | Sensitive | lineage4.3.4.2 | mw |
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