TB-Profiler
Home
Upload
SRA data
Rv2447c
- c.-109C>A
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.1;lineage6.3
1
M.canetti;lineage2.1;lineage4.9;lineage6.3
1
M.canetti;lineage2.1;lineage4.1.2.1
1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
1
Showing 1 to 6 of 6 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
8
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR5311078
MDR-TB
M.canetti;lineage2.1;lineage4.9;lineage6.3
None
SRR6325442
HR-TB
lineage2.1;lineage4.1.1.1;lineage6.3
None
SRR6325444
MDR-TB
M.canetti;lineage2.1;lineage6.3
None
SRR6325445
HR-TB
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
None
SRR6325447
MDR-TB
lineage2.1;lineage4.1.1.1;lineage6.3
None
SRR6325448
HR-TB
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
None
Showing 1 to 8 of 8 entries
Previous
1
Next