Rv2447c - c.1413G>C
Drug resistance types
251 Sensitive
0 RR-TB
13 HR-TB
25 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage7 | 17 |
| La1.8.1 | 9 |
| La1.7.1 | 1 |
| lineage4.1.1 | 15 |
| lineage3 | 32 |
| lineage3.1.1 | 38 |
| lineage3.1.2 | 3 |
| lineage4.1.1.3.1 | 23 |
| lineage1.1.2 | 14 |
| lineage4.8 | 15 |
| lineage6.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage6.2.2;lineage4 | 1 |
| lineage4.6.1 | 1 |
| lineage6 | 2 |
| lineage1.2.2.1 | 11 |
| lineage4.9.1 | 8 |
| lineage2.2.1 | 12 |
| lineage4.3.4.2.1 | 38 |
| lineage1.1.3.2 | 21 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 7 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage1.2.2.2 | 8 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9 | 3 |
| lineage4.1.1.3 | 7 |
| lineage1.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 15 |
| lineage4.6 | 1 |
| 1 | |
| lineage4.4.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.8.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.6.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 335 |
Geographic prevalence
Country level data for this variant is available for 264 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR233349 | Other | lineage7 | None | SRR1791995 | Other | La1.8.1 | None | SRR1792002 | Other | La1.7.1 | None | SRR2100070 | Sensitive | lineage4.1.1 | None | SRR2100071 | Sensitive | lineage4.1.1 | None | SRR2100075 | Sensitive | lineage3 | None | SRR2100072 | Other | La1.8.1 | None | SRR2100074 | Other | La1.8.1 | None | SRR2100068 | Sensitive | lineage3.1.1 | None | SRR2100077 | Sensitive | lineage3 | None | SRR2100080 | Sensitive | lineage3.1.2 | None | SRR2100088 | Sensitive | lineage3 | None | SRR2100081 | Sensitive | lineage3 | None | SRR2100101 | MDR-TB | lineage4.1.1.3.1 | None | SRR2100091 | Sensitive | lineage3 | None | SRR2100092 | Sensitive | lineage1.1.2 | None | SRR2100103 | Sensitive | lineage4.8 | None | SRR2100102 | Sensitive | lineage3 | None | ERR233355 | Sensitive | lineage7 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | SRR2467265 | Sensitive | lineage3 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR1199034 | Sensitive | lineage4.6.1.1 | ug | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1200603 | Sensitive | lineage7 | None | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | ERR841397 | Sensitive | lineage4.8 | rs | ERR1200637 | Sensitive | lineage4.2.2.2 | et | ERR1200609 | Sensitive | lineage3 | et | ERR233346 | Sensitive | lineage7 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR233368 | Sensitive | lineage6 | None | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR233369 | Other | lineage4.8 | et | ERR1200613 | Sensitive | lineage7 | et | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR245819 | Other | lineage3.1.1 | None | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR245650 | Sensitive | lineage4.9.1 | mw | ERR245649 | Other | lineage4.8 | mw | ERR245655 | Sensitive | lineage2.2.1 | mw | ERR245671 | Sensitive | lineage3.1.1 | mw | ERR245663 | Other | lineage2.2.1 | mw | ERR245665 | Sensitive | lineage4.3.4.2.1 | mw | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245672 | Sensitive | lineage1.2.2.1 | mw | ERR245678 | Other | lineage3 | mw | ERR245679 | Sensitive | lineage1.1.3.2 | mw | ERR245677 | Sensitive | lineage1.1.3.2 | mw | ERR245684 | Sensitive | lineage3.1.1 | mw | ERR245686 | Other | lineage4.3.4.2 | mw | ERR245695 | Sensitive | lineage1.1.3.2 | mw | ERR245697 | Sensitive | lineage4.3.4.1 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245698 | Sensitive | lineage1.1.2 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245705 | Sensitive | lineage1.1.3.2 | mw | ERR245710 | Sensitive | lineage2.2.1 | mw | ERR245707 | Sensitive | lineage4.3.4.2.1 | mw | ERR245726 | Sensitive | lineage3.1.1 | mw | ERR245718 | HR-TB | lineage4.3.4.2.1 | mw | ERR245724 | Sensitive | lineage4.3.4.2.1 | mw | ERR245723 | Sensitive | lineage2.2.1 | mw | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR245731 | Sensitive | lineage4.9.1 | mw | ERR245734 | Sensitive | lineage1.1.3.2 | mw | ERR245730 | Sensitive | lineage4.3.4.2.1 | mw | ERR245733 | HR-TB | lineage4.3.4.2.1 | mw | ERR245732 | Sensitive | lineage3.1.1 | mw | ERR245738 | Sensitive | lineage4.3.4.2.1 | mw | ERR245741 | MDR-TB | lineage4.3.4.2.1 | mw | ERR245751 | Sensitive | lineage1.2.2.1 | mw | ERR245758 | Other | lineage4.9.1 | None | ERR245766 | Sensitive | lineage3.1.1 | mw | ERR245767 | Sensitive | lineage4.3.4.2.1 | mw | ERR245774 | HR-TB | lineage4.1.2.1 | mw | ERR245780 | Sensitive | lineage4.3.4.2.1 | mw | ERR245793 | Other | lineage3 | mw | ERR245788 | Sensitive | lineage4.3.4.2.1 | mw | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245651 | MDR-TB | lineage1.2.2.2 | mw | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR1200605 | Other | lineage4.2.1 | et | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR245648 | Other | lineage1.1.3.2 | mw | ERR245654 | Sensitive | lineage1.1.3.2 | mw | ERR245652 | Sensitive | lineage1.1.3.2 | mw | ERR245657 | Sensitive | lineage1.1.3.2 | mw | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR245676 | Sensitive | lineage3.1.1 | mw | ERR245682 | Other | lineage3 | mw | ERR245670 | MDR-TB | lineage1.2.2.2 | mw | ERR245674 | Sensitive | lineage1.1.3.2 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245685 | Sensitive | lineage4.9.1 | mw | ERR245687 | Sensitive | lineage3.1.1 | mw | ERR245688 | Sensitive | lineage3.1.1 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245690 | Sensitive | lineage4.3.4.1 | mw | ERR245692 | Sensitive | lineage2.2.1 | mw | ERR245693 | Sensitive | lineage4.3.4.2.1 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245706 | Sensitive | lineage4.3.4.2.1 | mw | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245708 | Sensitive | lineage4.3.4.2.1 | mw | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245709 | Other | lineage4.3.4.2.1 | mw | ERR245712 | Sensitive | lineage4.9.1 | mw | ERR245715 | Sensitive | lineage3.1.1 | mw | ERR245717 | Sensitive | lineage1.1.3.2 | mw | ERR245719 | Sensitive | lineage4.9.1 | mw | ERR245721 | Sensitive | lineage1.1.3.2 | mw | ERR245722 | Other | lineage3 | mw | ERR245720 | Sensitive | lineage1.1.3.2 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245735 | Sensitive | lineage2.2.1 | mw | ERR245729 | Other | lineage4.3.4.2.1 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245739 | Sensitive | lineage1.2.2.1 | mw | ERR245757 | HR-TB | lineage3.1.1 | mw | ERR245761 | Sensitive | lineage1.1.3.2 | mw | ERR245756 | Sensitive | lineage4.3.4.2.1 | mw | ERR245755 | Sensitive | lineage4.3.4.2.1 | mw | ERR245770 | Sensitive | lineage4.3.4.2.1 | mw | ERR245773 | Sensitive | lineage4.3.4.2.1 | mw | ERR245782 | Sensitive | lineage1.1.3.2 | mw | ERR245783 | Sensitive | lineage2.2.1 | mw | ERR245775 | Sensitive | lineage1.1.3.2 | mw | ERR245785 | Sensitive | lineage4.9 | mw | ERR245796 | Sensitive | lineage3.1.1 | mw | ERR245806 | Sensitive | lineage4.8 | mw | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245817 | Sensitive | lineage1.1.3.2 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR245822 | Other | lineage1.1.3.2 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR245823 | Sensitive | lineage4.1.1.3 | None | ERR245826 | Sensitive | lineage4.3.4.2.1 | mw | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | ERR245834 | Sensitive | lineage2.2.1 | mw | ERR245835 | Other | lineage4.9.1 | mw | ERR245839 | Sensitive | lineage3.1.1 | mw | ERR245836 | MDR-TB | lineage1.2.2 | mw | ERR245838 | HR-TB | lineage3.1.1 | mw | ERR245843 | Sensitive | lineage1.2.2.1 | mw | ERR245846 | Sensitive | lineage2.2.1 | None | ERR233360 | Sensitive | lineage3 | None | ERR245842 | Sensitive | lineage4.1.1.3 | mw | ERR1200638 | Sensitive | lineage3 | et | ERR1200608 | Sensitive | lineage7 | et | ERR1200606 | Sensitive | lineage7 | et | ERR1200615 | Sensitive | lineage4.8 | et | ERR1200636 | Other | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200634 | Sensitive | lineage7 | et | ERR1200625 | Sensitive | lineage7 | et | ERR1200607 | HR-TB | lineage3 | et | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR233352 | Sensitive | lineage4.1.2.1 | None | ERR1200610 | Sensitive | lineage7 | et | ERR233366 | Sensitive | lineage6 | None | ERR1200623 | Sensitive | lineage7 | et | ERR1200628 | Sensitive | lineage4.1.2.1 | None | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR1200624 | Sensitive | lineage7 | et | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR1200617 | Other | lineage7 | et | ERR040094 | Sensitive | lineage4.8.2 | gb | ERR233370 | Other | lineage2.2.1 | None | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR1200621 | Sensitive | lineage4.6 | et | ERR1200633 | Sensitive | lineage7 | et | ERR037542 | Sensitive | lineage4.3.4.2.1 | mw | ERR040100 | Sensitive | lineage4.8.2 | gb | ERR040092 | Sensitive | lineage3.1.1 | None | ERR040099 | Sensitive | lineage4.8.2 | gb | SRR6045033 | HR-TB | None | ERR1200619 | Sensitive | lineage7 | et | ERR1200640 | Sensitive | lineage7 | et | ERR233347 | Sensitive | lineage3 | None | ERR038266 | Sensitive | lineage3.1.1 | gb | ERR040090 | Sensitive | lineage3.1.1 | gb | ERR040089 | Sensitive | lineage3.1.1 | gb | ERR040091 | Sensitive | lineage3.1.1 | gb | ERR040098 | Sensitive | lineage4.8.2 | gb | ERR040121 | MDR-TB | lineage1.1.2 | ug | ERR040106 | Sensitive | lineage3.1.1 | gb | ERR040115 | MDR-TB | lineage4.1.1.3 | ug | ERR040108 | Sensitive | lineage3.1.1 | gb | ERR040107 | Sensitive | lineage3.1.1 | gb | ERR040122 | MDR-TB | lineage4.8 | ug | ERR040117 | Sensitive | lineage4.3.4.2.1 | ug | ERR040118 | MDR-TB | lineage3 | ug | ERR040113 | Sensitive | lineage4.3.4.2.1 | ug | ERR040128 | MDR-TB | lineage4.4.1.1 | ug | ERR040119 | HR-TB | lineage3.1.2.1 | ug | ERR040131 | MDR-TB | lineage4.6.1.2 | ug | ERR040125 | MDR-TB | lineage4.6.1.2 | ug | ERR040134 | MDR-TB | lineage4.3.4.2.1 | ug | ERR040129 | MDR-TB | lineage3 | ug | ERR040124 | MDR-TB | lineage4.4.1.1 | ug | ERR040140 | Pre-XDR-TB | lineage3 | ug | ERR040138 | MDR-TB | lineage4.9 | ug | ERR040137 | MDR-TB | lineage4.1.1.3 | ug | ERR046735 | Sensitive | lineage4.1.1 | gb | ERR040142 | MDR-TB | lineage4.3.4.2.1 | ug | ERR046736 | Sensitive | lineage4.1.1 | gb | ERR046733 | Sensitive | lineage4.1.1 | gb | ERR046738 | Sensitive | lineage4.1.1 | gb | ERR046752 | Sensitive | lineage4.8.2 | gb | ERR046747 | Other | La1.8.1 | gb | ERR046749 | Other | La1.8.1 | gb | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046756 | Sensitive | lineage4.8.2 | gb | ERR046762 | Sensitive | lineage4.8.2 | gb | ERR046768 | Sensitive | lineage4.8.2 | gb | ERR046774 | Other | La1.8.1 | None | ERR046777 | HR-TB | lineage4.8.1 | gb | ERR046776 | Sensitive | lineage4.8.1 | gb | ERR046781 | Sensitive | lineage4.4.1.2 | gb | ERR046792 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046787 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046793 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046801 | Sensitive | lineage3 | None | ERR046796 | Pre-XDR-TB | lineage4.8 | gb | ERR046799 | Sensitive | lineage4.1.1.3.1 | gb | ERR046810 | Sensitive | lineage3.1.2 | None | ERR046807 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046821 | MDR-TB | lineage4.8 | gb | ERR046817 | Sensitive | lineage4.9 | None | ERR046826 | Sensitive | lineage3 | None | ERR046834 | HR-TB | lineage4.6.2.2 | gb | ERR046836 | Sensitive | lineage4.3.4.2.1 | gb | ERR046829 | Sensitive | lineage3 | None | ERR046837 | Sensitive | lineage4.3.4.2.1 | gb | ERR046845 | Sensitive | lineage3.1.1 | gb | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046849 | Sensitive | lineage1.1.2 | gb | ERR046847 | Sensitive | lineage3.1.1 | gb | ERR046857 | Sensitive | lineage3.1.1 | gb | ERR046860 | Sensitive | lineage3.1.1 | gb | ERR046855 | MDR-TB | lineage1.1.2 | gb | ERR046871 | Sensitive | lineage4.3.4.2.1 | gb | ERR046863 | Sensitive | lineage3 | gb | ERR046868 | Sensitive | lineage4.1.1.3 | gb | ERR046864 | Sensitive | lineage4.1.4 | gb | ERR046869 | Sensitive | lineage4.1.1.3 | gb | ERR046883 | Sensitive | lineage3 | gb | ERR046884 | Sensitive | lineage4.3.4.2.1 | gb | ERR046878 | Sensitive | lineage4.8.2 | gb | ERR046875 | Sensitive | lineage4.1.2.1 | gb | ERR046888 | Sensitive | lineage4.8 | gb | ERR046890 | Sensitive | lineage4.8 | gb | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046895 | Sensitive | lineage3 | gb | ERR046902 | Sensitive | lineage4.1.1.3 | None | ERR046903 | Pre-XDR-TB | lineage4.8 | gb | ERR046737 | Sensitive | lineage4.1.1 | gb | ERR046740 | Sensitive | lineage4.1.1 | None | ERR046750 | Other | La1.8.1 | None | ERR046742 | Sensitive | lineage4.1.1 | None | ERR046748 | Other | La1.8.1 | gb | ERR046744 | Sensitive | lineage4.1.1 | gb | ERR046754 | Sensitive | lineage4.8.2 | gb | ERR046753 | Sensitive | lineage4.8.2 | gb | ERR046760 | Sensitive | lineage4.8.2 | gb | ERR046765 | Sensitive | lineage4.8.2 | gb | ERR046771 | Sensitive | lineage3.1.1 | gb | ERR046773 | Sensitive | lineage3.1.1 | gb | ERR046783 | Sensitive | lineage4.1.1.3.1 | gb | ERR046782 | Sensitive | lineage4.1.1.3.1 | gb | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046780 | HR-TB | lineage3 | gb | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046791 | Sensitive | lineage4.1.1.3.1 | gb | ERR046788 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046790 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046797 | Sensitive | lineage4.1.1.3.1 | gb | ERR046800 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046803 | Sensitive | lineage3 | None | ERR046811 | Sensitive | lineage3 | None | ERR046823 | Sensitive | lineage1.2.2.2 | gb | ERR046824 | Sensitive | lineage1.2.2.2 | gb | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046832 | Sensitive | lineage1.1.2 | gb | ERR046838 | Sensitive | lineage4.6.2.1 | gb | ERR046843 | Sensitive | lineage4.1.1.3.1 | gb | ERR046840 | Sensitive | lineage4.1.1 | gb | ERR046852 | Sensitive | lineage4.1.1.3.1 | gb | ERR046850 | Sensitive | lineage1.2.2.2 | gb | ERR046853 | Sensitive | lineage4.1.1.3.1 | gb | ERR046858 | Sensitive | lineage3.1.1 | gb | ERR046867 | Sensitive | lineage3.1.1 | gb | ERR046856 | MDR-TB | lineage1.1.2 | gb | ERR046872 | Sensitive | lineage4.1.2.1 | gb | ERR046866 | Sensitive | lineage3.1.1 | gb | ERR046873 | Sensitive | lineage4.1.2.1 | gb | ERR046882 | Sensitive | lineage3 | gb | ERR046880 | Sensitive | lineage1.2.2.2 | gb | ERR046885 | Sensitive | lineage4.3.4.2.1 | gb | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046881 | Sensitive | lineage1.2.2.2 | gb | ERR046892 | Sensitive | lineage4.4.2 | gb | ERR046893 | Other | lineage1.2.2.1 | gb | ERR046898 | Sensitive | lineage1.2.2.1 | gb | ERR046894 | Sensitive | lineage4.3.3 | gb | ERR046900 | Sensitive | lineage1.1.2 | gb | ERR046899 | Sensitive | lineage4.8 | None | ERR046906 | Sensitive | lineage4.1.1 | gb | ERR046910 | Sensitive | lineage4.1.1.3.1 | gb | ERR046920 | Sensitive | lineage4.8.2 | gb | ERR046916 | Sensitive | lineage4.1.1 | gb | ERR046919 | Sensitive | lineage4.1.1.3.1 | gb | ERR046937 | Sensitive | lineage4.1.2.1 | gb | ERR046905 | Sensitive | lineage1.1.2 | gb | ERR046917 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046914 | Sensitive | lineage3.1.1 | gb | ERR046911 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046912 | Sensitive | lineage4.1.1 | gb | ERR046924 | Sensitive | lineage4.1.1 | gb | ERR046939 | Sensitive | lineage3.1.2.2 | gb | ERR046966 | Sensitive | lineage2.2.1 | gb | ERR046954 | Other | La1.8.1 | gb | ERR046987 | Sensitive | lineage3 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR047015 | Sensitive | lineage4.8 | None |
|---|
