ERR751463
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4812356
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6824351
|
RR-TB
|
lineage2.2.1
|
cn
|
ERR751427
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813135
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR12117964
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR3732590
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393276
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393466
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13261567
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393359
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393326
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393664
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28351580
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28393358
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR22461607
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13290678
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13291163
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811800
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2510679
|
MDR-TB
|
lineage4.3.4.2
|
it
|
ERR4798733
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR22461627
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR3287472
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287580
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393785
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034784
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287492
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287768
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR11138645
|
MDR-TB
|
lineage4
|
None
|
ERR13284262
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR751570
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR10808652
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4812752
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813349
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813449
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR29081599
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4024559
|
HR-TB
|
lineage4.3.4.2
|
None
|
SAMEA5569880
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR9907797
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR13260044
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13284987
|
MDR-TB
|
lineage4.8
|
None
|
ERR775353
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR22175233
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR19276643
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR12117900
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR751572
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR10808884
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287838
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
SRR25827875
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage2.2.1;lineage3
|
None
|
ERR4811666
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510224
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751574
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751513
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR751582
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260585
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4813386
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR10854751
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR775342
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287567
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR779880
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287502
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865978
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR22175264
|
XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4813281
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR7911342
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR11043096
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4813156
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510132
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4812735
|
HR-TB
|
lineage4.3.4.2
|
pe
|
DRR130165
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3148055
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR779885
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR13870375
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR16370489
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751496
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813490
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR3287483
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510235
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR12118022
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287619
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6866134
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2510139
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR12117931
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516508
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR9029875
|
MDR-TB
|
lineage4.1.1.1;lineage4.3.4.2
|
None
|
ERR751425
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813596
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29127057
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287752
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR13870401
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287462
|
HR-TB
|
lineage4.3.4.2
|
None
|
SRR28393936
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287666
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510877
|
MDR-TB
|
lineage4.3.4.2
|
it
|
ERR775350
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751559
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR16370511
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751426
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260317
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4025027
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7911372
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6865796
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393492
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29356698
|
HR-TB
|
lineage4.3.3
|
None
|
ERR3287570
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR779870
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393641
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR12117916
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13266461
|
XDR-TB
|
lineage4.1.2.1
|
None
|
ERR12117896
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393790
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4812896
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393568
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7910993
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751608
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13291050
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207333
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
ERR6866515
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751368
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR11082922
|
MDR-TB
|
lineage4.8
|
None
|
ERR779869
|
HR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393537
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287688
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6152905
|
HR-TB
|
lineage2.1
|
ca
|
ERR7910845
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR19276638
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813535
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4799263
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
SAMEA5569759
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR6866333
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393308
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR845937
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR12117937
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR2510140
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13290756
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751560
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287460
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287609
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287770
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SAMEA5569694
|
MDR-TB
|
lineage4.1.1.1;lineage4.3.4.2
|
None
|
ERR751477
|
HR-TB
|
lineage4.3.4.2
|
pe
|
SRR28394093
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4024921
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2184620
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516480
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4024759
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4812836
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751536
|
HR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393623
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR4812875
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516478
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4024783
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR13284914
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR30180346
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2432994
|
Pre-XDR-TB
|
lineage4.3.4.1
|
br
|
ERR3287490
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287497
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR779865
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR13870412
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287501
|
MDR-TB
|
lineage4.1.1.1;lineage4.3.4.2
|
None
|
ERR4813718
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11081241
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR24223029
|
HR-TB
|
lineage4.3.3
|
None
|
ERR779854
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287659
|
HR-TB
|
lineage4.3.4.2
|
pe
|
SRR29081601
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287616
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR6865416
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865544
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287465
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4024744
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4811353
|
Pre-XDR-TB
|
lineage4.4.2
|
cn
|
ERR6879040
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR775387
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751439
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6511622
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR9907694
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR3287566
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR2516463
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13261658
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4813056
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR4811965
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR6866070
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287583
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287687
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813630
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287572
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287573
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813666
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813829
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR28393592
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393632
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28394262
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393273
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR751482
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751565
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393663
|
MDR-TB
|
lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2
|
None
|
ERR13260633
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR13284842
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13261692
|
HR-TB
|
lineage4.3.4.2;lineage4.8
|
None
|
ERR751547
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393786
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4811777
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28394218
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393639
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR13260154
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR22250067
|
HR-TB
|
lineage1.1.2
|
None
|
SRR28393495
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7910843
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR7910871
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6865384
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13870408
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865990
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR9029876
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR4024763
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4178182
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR11082757
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287454
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287767
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4797720
|
XDR-TB
|
lineage3
|
in
|
ERR3287661
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28393930
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4025134
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7911002
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260277
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287394
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813139
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865475
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751597
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4178299
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813554
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813358
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4797645
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR4813195
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR6865980
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR6865538
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR7910844
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13870391
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR751549
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR9029859
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR28394068
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR779921
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR28393581
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516572
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510170
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813217
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR21576699
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866863
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR13870400
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287478
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR4812064
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR775351
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SAMEA5569854
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR1034758
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287840
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287835
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813469
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13261911
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR8186778
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13261631
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR13260197
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287598
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR4829756
|
MDR-TB
|
lineage4.3.4.2
|
it
|
ERR2516696
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510200
|
HR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510202
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR9029857
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR1723654
|
RR-TB
|
lineage2.2.1
|
cn
|
ERR751434
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR12117986
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR751396
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.2
|
pe
|
ERR2510196
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751563
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813417
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2516424
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR13260254
|
HR-TB
|
lineage4.3.4.2
|
None
|
ERR6865735
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2184370
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR2510217
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR751530
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR12117975
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2516412
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4813057
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR2864260
|
MDR-TB
|
lineage4.3.4.1
|
pt
|