lineage | Count |
---|---|
lineage2.2.1 | 32 |
2 | |
lineage2.2.1.1 | 3 |
lineage4.8 | 22 |
lineage4.3.3 | 4 |
lineage4.1.2.1 | 3 |
lineage4.8;lineage2.2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.2.1 | 7 |
lineage2.2.2 | 3 |
lineage4.9 | 2 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02419541 | Pre-XDR-TB | lineage2.2.1 | by | ERR11049123 | HR-TB | lineage2.2.1 | None | SRR1013618 | MDR-TB | None | ERR067665 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1035098 | Pre-XDR-TB | lineage2.2.1 | vn | ERR11043477 | HR-TB | lineage2.2.1 | None | SRR1368341 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR17406769 | Pre-XDR-TB | lineage4.8 | None | DRR130199 | Pre-XDR-TB | lineage2.2.1 | None | ERR019556 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034735 | MDR-TB | lineage4.3.3 | pe | ERR3287860 | MDR-TB | lineage4.3.3 | pe | ERR11043641 | HR-TB | lineage2.2.1 | None | ERR3287521 | MDR-TB | lineage4.3.3 | None | ERR3287686 | MDR-TB | lineage4.3.3 | None | ERR3287503 | MDR-TB | lineage4.1.2.1 | None | ERR11049525 | HR-TB | lineage2.2.1 | None | ERR4553920 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553951 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796969 | Pre-XDR-TB | lineage4.8 | in | ERR403297 | MDR-TB | lineage2.2.1 | None | ERR4553903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796385 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796775 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796946 | MDR-TB | lineage4.8 | in | ERR4798005 | Pre-XDR-TB | lineage4.8 | in | ERR4797800 | MDR-TB | lineage4.8 | in | ERR4798043 | MDR-TB | lineage4.8 | in | ERR4798511 | Pre-XDR-TB | lineage4.8 | in | ERR4798091 | MDR-TB | lineage4.8 | in | ERR4799796 | XDR-TB | lineage4.8 | in | ERR4798833 | Pre-XDR-TB | lineage4.8 | in | ERR4799300 | Pre-XDR-TB | lineage4.8 | in | ERR4798691 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798828 | Pre-XDR-TB | lineage4.8 | in | ERR4799169 | Pre-XDR-TB | lineage4.8 | in | ERR4799182 | Pre-XDR-TB | lineage4.8 | in | ERR4799503 | MDR-TB | lineage4.8 | in | ERR4800367 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | in | ERR4799867 | Pre-XDR-TB | lineage4.8 | in | ERR4800552 | Pre-XDR-TB | lineage3.1.2.1 | in | ERR4800625 | Pre-XDR-TB | lineage4.8 | None | ERR2677408 | HR-TB | lineage2.2.1 | de | ERR5864331 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865533 | MDR-TB | lineage4.2.1 | None | SRR8380894 | MDR-TB | lineage2.2.1 | in | SRR1710076 | Pre-XDR-TB | lineage2.2.2 | cn | ERR5864330 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865532 | MDR-TB | lineage4.2.1 | None | SRR8003011 | MDR-TB | lineage4.8 | in | SRR1723459 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797669 | Pre-XDR-TB | lineage4.8 | in | SRR6824688 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510655 | MDR-TB | lineage2.2.1 | it | ERR4797483 | Pre-XDR-TB | lineage4.8 | in | ERR234672 | MDR-TB | lineage2.2.1 | ru | ERR234589 | MDR-TB | lineage2.2.1 | ru | ERR4799754 | Pre-XDR-TB | lineage4.8 | in | SRR7898215 | HR-TB | lineage4.1.2.1 | None | SRR5817469 | Pre-XDR-TB | lineage2.2.1 | au | SRR5266562 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2516410 | MDR-TB | lineage4.2.1 | nl | SRR6398091 | MDR-TB | lineage2.2.1 | ca | ERR2516660 | MDR-TB | lineage4.2.1 | nl | ERR2516656 | MDR-TB | lineage4.2.1 | None | ERR4796864 | Pre-XDR-TB | lineage4.8 | in | SRR23691440 | MDR-TB | lineage2.2.1 | None | ERR2515910 | Pre-XDR-TB | lineage2.2.1 | za | ERR4827527 | MDR-TB | lineage4.2.1 | None | SRR15723011 | Pre-XDR-TB | lineage2.2.2 | None | SRR3742658 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10430389 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829392 | Pre-XDR-TB | lineage4.9 | it | ERR4828902 | Sensitive | lineage4.1.2.1 | None | ERR4828974 | Pre-XDR-TB | lineage4.9 | it | SRR1049041 | MDR-TB | None | ERR3148040 | MDR-TB | lineage4.2.1 | None | SRR671824 | Pre-XDR-TB | lineage2.2.2 | cn | ERR7911700 | Pre-XDR-TB | lineage2.2.1 | za | ERR4830950 | Pre-XDR-TB | lineage2.2.1 | np |
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