ERR7911111
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR5153259
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1166919
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4828721
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR25827571
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10868923
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133861
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4822375
|
HR-TB
|
lineage4.8
|
kg
|
ERR5865355
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290799
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4011071
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864498
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515475
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662407
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8976011
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR11662201
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662454
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662381
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865736
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864795
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175230
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SAMN02628481
|
Pre-XDR-TB
|
lineage2.2.1
|
ir
|
ERR144579
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR5864586
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1183028
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081060
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081887
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26937067
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206936
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6485113
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1367219
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797902
|
XDR-TB
|
lineage2.2.1.1
|
in
|
ERR5865356
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13439855
|
HR-TB
|
lineage1.1.1;lineage2.2.1
|
None
|
ERR5866004
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866359
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865732
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865783
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6397961
|
HR-TB
|
lineage2.2.1
|
ca
|
ERR13284698
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR067549
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5709770
|
MDR-TB
|
lineage2.2.1.1
|
th
|
SRR11033646
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR5152914
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865873
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29356714
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6152985
|
HR-TB
|
lineage2.2.2
|
ca
|
SRR14801729
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28868614
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR2843515
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710050
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4832063
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR5864798
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865835
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665787
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10877857
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02419571
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SRR24709979
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911391
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR16088361
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041713
|
MDR-TB
|
lineage4.8
|
None
|
ERR5865343
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043122
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20632794
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR6831864
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28467049
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR24710218
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28706373
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351396
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865190
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13439884
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13439905
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11662362
|
Pre-XDR-TB
|
lineage4.2.2
|
None
|
ERR13290264
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290620
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29440744
|
HR-TB
|
lineage2.1
|
None
|
SRR29538945
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284851
|
MDR-TB
|
lineage4.8
|
None
|
SRR24710242
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3148039
|
MDR-TB
|
lineage4.8
|
None
|
SRR1169086
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16088432
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865735
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866218
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866357
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11044220
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28741120
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828014
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1162535
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10869102
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
ERR4817599
|
HR-TB
|
lineage2.2.1
|
gb
|
SRR5709910
|
MDR-TB
|
lineage2.2.1
|
th
|
SRR6824608
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR5864501
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864546
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865226
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865830
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043745
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR22250127
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3132169
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR11776018
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR13292553
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100911
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28045123
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR16088187
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710257
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831308
|
Other
|
lineage2.2.1
|
de
|
ERR5865969
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866334
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290236
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539762
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19324986
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR4828073
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10430324
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864588
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910961
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR7911717
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR14807615
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828580
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR1034810
|
Pre-XDR-TB
|
lineage4.8
|
pt
|
SRR10828187
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2514549
|
Other
|
lineage2.2.1
|
gb
|
SRR25827807
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR14781959
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133890
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR2516897
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR4800290
|
XDR-TB
|
lineage2.2.1.1;lineage4.8
|
in
|
SRR3544725
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351278
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28239738
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR5865802
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710276
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR24256130
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864499
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10828629
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864926
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866257
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865861
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10877877
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13289335
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR8651562
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR28888080
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR3148038
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR11043526
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10828614
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082440
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26112723
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28239564
|
HR-TB
|
lineage4.1
|
None
|
ERR5866332
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081519
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28706600
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662376
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284849
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR16088124
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28741127
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21576585
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866431
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24827308
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR11798562
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207182
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14781988
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4832039
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR10430358
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12882303
|
HR-TB
|
lineage1.1.1
|
None
|
ERR5865829
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866358
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675523
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1465942
|
HR-TB
|
lineage4.8
|
tr
|
SRR1723583
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR2100889
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665762
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665983
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10040502
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041721
|
MDR-TB
|
lineage4.8
|
rs
|
SRR25389547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR21747064
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866279
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662422
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1172289
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2517027
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR21277572
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR13232547
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830130
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10877885
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827443
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22137426
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5073764
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR11082026
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5153217
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02360564
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23310881
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910948
|
MDR-TB
|
lineage2.2.1
|
md
|
SRR28706568
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172064
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13265281
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797458
|
XDR-TB
|
lineage3
|
in
|
ERR5864330
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864797
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290619
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13265484
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR130213
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4822440
|
MDR-TB
|
lineage2.2.1
|
de
|
ERR5865216
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831909
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4831957
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR11662379
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22351877
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2707002
|
MDR-TB
|
lineage5.2
|
cd
|
ERR2446120
|
MDR-TB
|
lineage2.2.1
|
nl
|
SRR11567806
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7516334
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23938634
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25206956
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29772797
|
Pre-XDR-TB
|
lineage4.3
|
None
|
ERR8773587
|
HR-TB
|
lineage2.2.1
|
None
|
ERR270773
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR270789
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665867
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232520
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866891
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR5865191
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662685
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662270
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831953
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4799690
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR5864924
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969922
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28706536
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10397201
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662576
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR11662602
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181134
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR12796620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351218
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28706618
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864502
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865222
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2707170
|
MDR-TB
|
lineage5.2
|
cd
|
SRR28046133
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR8651604
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13286206
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR13290817
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29341562
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR10873678
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11050660
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28741130
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28741133
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516506
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR13292469
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR1162812
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662451
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21277575
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173844
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9970994
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11043561
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399731
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13276324
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29358130
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6485061
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12142325
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232534
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866558
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29356610
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4810992
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR13232587
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232627
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290753
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4828550
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29231682
|
MDR-TB
|
lineage5.2
|
None
|
ERR10762496
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29050681
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR29051235
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662203
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662319
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7657752
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207204
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232646
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284824
|
Other
|
lineage2.2.1
|
None
|
SRR11567805
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866258
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762267
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865731
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865357
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3544724
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26399409
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2516965
|
MDR-TB
|
lineage2.2.1.1
|
gb
|
SRR10828617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24256306
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824285
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR5866216
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR130216
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
ERR5864331
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR403227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830248
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR11662332
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR3275693
|
MDR-TB
|
lineage2.2.1
|
nl
|
ERR5864494
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR30180457
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864550
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866317
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814994
|
HR-TB
|
lineage2.2.1
|
gb
|
SRR29050969
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13276245
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29053579
|
MDR-TB
|
lineage4.3.4.1
|
None
|
ERR4818256
|
Other
|
lineage4.1.1.1
|
None
|
SRR11662415
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR27069399
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4828575
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865845
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR1163405
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23340148
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5709860
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
ERR5865784
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662525
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119336
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02419649
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
SRR13870427
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4816874
|
HR-TB
|
lineage2.2.1
|
gb
|
ERR5866073
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516960
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR29538940
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082684
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR25389551
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798209
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR3287474
|
HR-TB
|
lineage4.3.4.2
|
pe
|
SRR5065631
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR386883
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865192
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865844
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR5865862
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866074
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10040368
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SAMN02419650
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR5865820
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163080
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662647
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4811310
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR13583354
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR2516899
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR1163114
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23310929
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799721
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR4811136
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR067605
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR10762271
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4832027
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR24255918
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370503
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165550
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864923
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290265
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8025482
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11082857
|
MDR-TB
|
lineage2.2.1;lineage4.3.4.1
|
None
|
ERR11243554
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29681334
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662528
|
MDR-TB
|
lineage2.1
|
None
|
ERR5864495
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22249732
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1144794
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290677
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865819
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911719
|
Pre-XDR-TB
|
lineage2.2.1
|
us
|
ERR5865219
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29358137
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18054786
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28888082
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28467046
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13285133
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13291119
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28240064
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25395618
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5817464
|
MDR-TB
|
lineage2.2.1
|
au
|
ERR13290741
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911427
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR28741124
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR8651654
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR29127089
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29681340
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13276342
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11798563
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796355
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4822297
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
ERR7911276
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR5709912
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
ERR11050015
|
Other
|
lineage4.1.2.1
|
None
|
ERR11082934
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351263
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR13284836
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284912
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
DRR130148
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR5837710
|
Pre-XDR-TB
|
lineage2.2.1.1
|
th
|
SRR6256965
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11243575
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28859799
|
Other
|
lineage4.1.1.2;lineage4.7
|
None
|
ERR067738
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR7362025
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR8847015
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10828189
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR7496554
|
MDR-TB
|
lineage4.1.2.1
|
us
|
SRR16088199
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4829549
|
MDR-TB
|
lineage2.2.1
|
it
|
SRR29093369
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911384
|
MDR-TB
|
lineage2.2.1
|
us
|
ERR4831414
|
MDR-TB
|
lineage2.2.1
|
de
|
ERR4831931
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR5864496
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864504
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3743406
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799380
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR13583347
|
MDR-TB
|
lineage4.3.2
|
None
|
DRR474080
|
HR-TB
|
lineage4.9
|
None
|
SRR28888071
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR13232613
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29050858
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864497
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864589
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864794
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29053506
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR5865189
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827734
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR11773792
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866559
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866537
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162845
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864491
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864799
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864801
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6257048
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24709963
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5065451
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR10762451
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6458389
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02414984
|
Pre-XDR-TB
|
lineage2.2.1
|
se
|
ERR5864547
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4828227
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR29017303
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7652975
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5074170
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR11662543
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR16088531
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23938589
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR10040357
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798942
|
XDR-TB
|
lineage3.1.2
|
in
|
ERR10869177
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133984
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR13290263
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24256172
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1165490
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232490
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864503
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865342
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2041714
|
MDR-TB
|
lineage4.8
|
rs
|
ERR4800353
|
XDR-TB
|
lineage2.2.1.1
|
in
|
ERR7737775
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5153595
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782199
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992686
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR1180230
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800437
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR28888081
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29093922
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380125
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207051
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1465791
|
HR-TB
|
lineage4.1.2.1
|
ch
|
ERR7911420
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR21675449
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR5758332
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR13290989
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773777
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7585426
|
HR-TB
|
lineage3
|
in
|
ERR11081434
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11138606
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR7911417
|
Pre-XDR-TB
|
lineage2.2.1
|
us
|
ERR5864800
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866321
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715137
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2707138
|
MDR-TB
|
lineage5.2
|
cd
|
SRR13232585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25389546
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3148045
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
ERR10877883
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710028
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827328
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR6824700
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR5866256
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162765
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24710173
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831791
|
HR-TB
|
lineage1.1.1;lineage2.2.1
|
vn
|
ERR5864796
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662705
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4815988
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR5153718
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172392
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865217
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165377
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3205961
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6280281
|
HR-TB
|
lineage2.2.1
|
cn
|
SRR5153223
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831839
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7646019
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10828613
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710190
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR7737763
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26936925
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1174894
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865228
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830300
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR4798829
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
ERR5866320
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866536
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5866003
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865979
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR108510
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2513880
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR5864489
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1013570
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3639788
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043416
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864506
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864507
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1013569
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662632
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1167114
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662255
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865220
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232662
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866322
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11080996
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864492
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21031687
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797852
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR8773585
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02584676
|
MDR-TB
|
lineage2.2.1
|
md
|
ERR11082996
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290772
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4816056
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5709909
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR3675262
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR4799903
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR11662500
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043560
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662294
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1169142
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284415
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR22424792
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR13285148
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR5152903
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207226
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2706945
|
MDR-TB
|
lineage5.2
|
cd
|
SRR16370524
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351321
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865905
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR278524
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866278
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5918003
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
ERR5865781
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21887650
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6824698
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR5864548
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2706978
|
MDR-TB
|
lineage5.2
|
cd
|
SRR7516337
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662559
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11243561
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516473
|
MDR-TB
|
lineage4.2.1.1
|
nl
|
SRR5709931
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR24222954
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18714857
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10869292
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864545
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822391
|
Pre-XDR-TB
|
lineage2.2.1
|
kg
|
ERR4276910
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1035098
|
Pre-XDR-TB
|
lineage2.2.1
|
vn
|
ERR8665788
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2677435
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
SRR15014683
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822327
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3287723
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4798318
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR5864542
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR776664
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR6369878
|
HR-TB
|
lineage2.2.1
|
au
|
SRR11662323
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR11044692
|
MDR-TB
|
lineage4.8
|
None
|
ERR4817083
|
HR-TB
|
lineage2.2.1
|
gb
|
SRR10305655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866280
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10809154
|
HR-TB
|
lineage4.8
|
None
|
ERR5864505
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539616
|
HR-TB
|
lineage2.2.1
|
None
|
ERR8975767
|
XDR-TB
|
lineage2.2.2
|
None
|
SRR5153717
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR22424782
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR5864490
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822338
|
MDR-TB
|
lineage2.2.1
|
de
|
ERR5865218
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831000
|
MDR-TB
|
lineage2.2.1
|
de
|
SRR1159121
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14807685
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162795
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662670
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18913754
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR10303350
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6397615
|
HR-TB
|
lineage2.2.1
|
ca
|
ERR386982
|
HR-TB
|
lineage2.2.1
|
None
|
ERR017786
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865782
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4816805
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4809225
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR23938697
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6280289
|
HR-TB
|
lineage2.2.1
|
cn
|
SRR15368786
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082971
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516858
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR24710081
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831886
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR5864488
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181307
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10303281
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10397149
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1146379
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662476
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864802
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864922
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662608
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119282
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675289
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR26399445
|
HR-TB
|
lineage2.2.1
|
None
|
SRR5709781
|
MDR-TB
|
lineage4.2.2
|
th
|
SRR25395635
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26399915
|
HR-TB
|
lineage2.2.1
|
None
|
SRR18715244
|
HR-TB
|
lineage4.1
|
None
|
SRR067512
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864543
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13292541
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11044136
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5709929
|
MDR-TB
|
lineage2.2.1
|
th
|
ERR11044919
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864500
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662139
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28351616
|
MDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
SRR21733264
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR28888083
|
XDR-TB
|
lineage2.2.1
|
None
|
SAMN02414865
|
MDR-TB
|
lineage2.2.1
|
se
|
SRR11662458
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR8363837
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811488
|
HR-TB
|
lineage2.2.1
|
cn
|
ERR4831798
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR5866217
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832461
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866430
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100873
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7516330
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13290746
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02628490
|
Pre-XDR-TB
|
lineage2.2.1
|
ir
|
SRR067563
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865981
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7069821
|
HR-TB
|
lineage3
|
None
|
ERR4828145
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR5865221
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02360571
|
HR-TB
|
lineage2.2.1;lineage2.2.2
|
None
|
SRR6832119
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516399
|
MDR-TB
|
lineage2.2.1
|
be
|
SRR24710019
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207264
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715190
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662580
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798623
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799245
|
XDR-TB
|
lineage2.2.1.1
|
in
|
SRR6257005
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4829007
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
ERR13284135
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831898
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864549
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662392
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830963
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR4831761
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR4799344
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR108469
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR13232431
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1166104
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15316550
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR5065610
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR11033686
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5709796
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR11662368
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7069603
|
HR-TB
|
lineage3
|
None
|
ERR8665586
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662515
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665810
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5152920
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865801
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100870
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10867702
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864587
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02414975
|
Pre-XDR-TB
|
lineage2.2.1
|
se
|
ERR270769
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5065637
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR019860
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866318
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1166878
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10877873
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866319
|
MDR-TB
|
lineage2.2.1
|
None
|