lineage | Count |
---|---|
lineage2.2.1 | 123 |
lineage4.8 | 5 |
lineage4.3.3 | 2 |
lineage5.2 | 5 |
lineage4.2.2 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.2 | 4 |
lineage2.2 | 13 |
lineage2.2.1.1 | 9 |
lineage3.1.2 | 4 |
lineage4.1.2.1 | 3 |
lineage3 | 2 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage4.8;lineage2.2.1.1 | 1 |
lineage2.2.1;lineage1.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 177 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675523 | MDR-TB | lineage2.2.1 | None | ERR4822391 | Pre-XDR-TB | lineage2.2.1 | kg | ERR1465942 | HR-TB | lineage4.8 | tr | ERR4811310 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723583 | MDR-TB | lineage2.2.1 | cn | SAMN02419650 | Pre-XDR-TB | lineage2.2.1 | by | ERR2041721 | MDR-TB | lineage4.8 | rs | ERR2516899 | MDR-TB | lineage2.2.1 | gb | SAMN02628481 | Pre-XDR-TB | lineage2.2.1 | ir | ERR4809225 | MDR-TB | lineage4.3.3 | za | ERR2707138 | MDR-TB | lineage5.2 | cd | SRR5709781 | MDR-TB | lineage4.2.2 | th | ERR4830130 | MDR-TB | lineage2.2.1 | None | ERR144579 | MDR-TB | lineage2.2.1 | ru | ERR2517027 | MDR-TB | lineage2.2.1 | gb | ERR7910948 | MDR-TB | lineage2.2.1 | md | SRR5073764 | MDR-TB | lineage2.2.1 | vn | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831796 | HR-TB | lineage2.2.1 | None | ERR2707170 | MDR-TB | lineage5.2 | cd | ERR4799721 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR5709929 | MDR-TB | lineage2.2.1 | th | ERR7911427 | MDR-TB | lineage2.2.1 | us | ERR067605 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6397961 | HR-TB | lineage2.2.1 | ca | SRR6152985 | HR-TB | lineage2.2.2 | ca | SRR2100911 | MDR-TB | lineage2.2.1 | None | ERR2707002 | MDR-TB | lineage5.2 | cd | ERR2446120 | MDR-TB | lineage2.2.1 | nl | ERR2516863 | MDR-TB | lineage2.2.1 | gb | ERR4831886 | MDR-TB | lineage2.2.1 | vn | SRR6824608 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4828227 | MDR-TB | lineage2.2.1 | vn | ERR7911717 | MDR-TB | lineage2.2.1 | us | SRR5065610 | MDR-TB | lineage2.2.1 | vn | ERR8665867 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811488 | HR-TB | lineage2.2.1 | cn | SAMN02419571 | Pre-XDR-TB | lineage2.2.1 | by | ERR4831953 | MDR-TB | lineage2.2.1 | vn | ERR4831761 | MDR-TB | lineage2.2.1 | vn | ERR4799690 | XDR-TB | lineage2.2.1 | in | SRR8651562 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824285 | MDR-TB | lineage2.2.1 | cn | ERR10868923 | MDR-TB | lineage2.2 | None | ERR2516506 | MDR-TB | lineage2.2.1 | nl | ERR10877857 | MDR-TB | lineage2.2 | None | ERR10869177 | MDR-TB | lineage2.2 | None | ERR10869102 | MDR-TB | lineage2.2 | None | ERR10873678 | MDR-TB | lineage2.2 | None | SRR23310929 | MDR-TB | lineage2.2 | None | ERR10877883 | HR-TB | lineage2.2 | None | SRR16088361 | MDR-TB | lineage2.2 | None | SRR16088531 | MDR-TB | lineage2.2 | None | SRR15014683 | MDR-TB | lineage2.2 | None | ERR10877885 | MDR-TB | lineage2.2 | None | SRR23310881 | MDR-TB | lineage2.2 | None | ERR2516965 | MDR-TB | lineage2.2.1.1 | gb | SRR5709910 | MDR-TB | lineage2.2.1 | th | ERR133890 | Pre-XDR-TB | lineage2.2.1 | ru | SAMN02414865 | MDR-TB | lineage2.2.1 | se | ERR8975767 | XDR-TB | lineage2.2.2 | None | ERR2516960 | MDR-TB | lineage2.2.1 | gb | ERR2041714 | MDR-TB | lineage4.8 | rs | SAMN02414984 | Pre-XDR-TB | lineage2.2.1 | se | SRR23340148 | MDR-TB | lineage2.2 | None | SRR5074170 | HR-TB | lineage2.2.1 | vn | SRR3675262 | MDR-TB | lineage2.2.1 | gb | SRR6257025 | MDR-TB | lineage2.2.1 | ru | ERR3287723 | MDR-TB | lineage4.3.3 | pe | SRR5709770 | MDR-TB | lineage2.2.1.1 | th | ERR7911719 | Pre-XDR-TB | lineage2.2.1 | us | SRR2100889 | MDR-TB | lineage2.2.1 | None | ERR4817083 | HR-TB | lineage2.2.1 | gb | ERR4830248 | HR-TB | lineage2.2.1 | vn | ERR4798942 | XDR-TB | lineage3.1.2 | in | ERR4800353 | XDR-TB | lineage2.2.1.1 | in | SRR6280281 | HR-TB | lineage2.2.1 | cn | ERR7911391 | MDR-TB | lineage2.2.1 | us | ERR133984 | MDR-TB | lineage2.2.1 | ru | ERR8665586 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797902 | XDR-TB | lineage2.2.1.1 | in | ERR4799245 | XDR-TB | lineage2.2.1.1 | in | ERR7911420 | MDR-TB | lineage2.2.1 | us | ERR4828575 | MDR-TB | lineage2.2.1 | None | ERR8665810 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796355 | Pre-XDR-TB | lineage3.1.2 | in | ERR4799903 | Pre-XDR-TB | lineage3.1.2 | in | ERR7911276 | MDR-TB | lineage2.2.1 | vn | ERR2706945 | MDR-TB | lineage5.2 | cd | ERR2516897 | MDR-TB | lineage2.2.1 | gb | ERR1465791 | HR-TB | lineage4.1.2.1 | ch | SRR3675289 | MDR-TB | lineage2.2.1 | gb | ERR4831308 | Other | lineage2.2.1 | de | SRR7585426 | HR-TB | lineage3 | in | ERR1034810 | Pre-XDR-TB | lineage4.8 | pt | ERR7911417 | Pre-XDR-TB | lineage2.2.1 | us | SRR7496554 | MDR-TB | lineage4.1.2.1 | us | ERR2706978 | MDR-TB | lineage5.2 | cd | SRR6824698 | MDR-TB | lineage2.2.1 | cn | SRR5065451 | HR-TB | lineage2.2.1 | vn | SRR6824700 | MDR-TB | lineage2.2.1 | cn | SRR5709931 | Pre-XDR-TB | lineage2.2.1 | th | ERR4830963 | Pre-XDR-TB | lineage2.2.1 | np | SRR5709912 | Pre-XDR-TB | lineage2.2.1 | th | ERR4828580 | MDR-TB | lineage2.2.1 | vn | ERR4822440 | MDR-TB | lineage2.2.1 | de | ERR4831898 | MDR-TB | lineage2.2.1 | None | ERR4799380 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4829007 | Pre-XDR-TB | lineage2.2.1 | it | ERR4832027 | HR-TB | lineage2.2.1 | vn | ERR4831798 | HR-TB | lineage2.2.1 | vn | SRR8651654 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2100873 | MDR-TB | lineage2.2.1 | None | ERR2677435 | Pre-XDR-TB | lineage2.2.1 | de | ERR4832063 | HR-TB | lineage2.2.1 | vn | ERR4798318 | Pre-XDR-TB | lineage3.1.2 | in | ERR4828145 | MDR-TB | lineage2.2.1 | vn | ERR4800437 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4829549 | MDR-TB | lineage2.2.1 | it | ERR2516399 | MDR-TB | lineage2.2.1 | be | ERR4822297 | Pre-XDR-TB | lineage2.2.1 | de | SRR5709796 | Pre-XDR-TB | lineage2.2.1 | th | SRR6369878 | HR-TB | lineage2.2.1 | au | ERR3275693 | MDR-TB | lineage2.2.1 | nl | ERR7910961 | MDR-TB | lineage2.2.1 | md | ERR5918003 | Pre-XDR-TB | lineage2.2.2 | za | SRR5817464 | MDR-TB | lineage2.2.1 | au | ERR4800290 | XDR-TB | lineage4.8;lineage2.2.1.1 | in | ERR4798623 | Pre-XDR-TB | lineage2.2.1 | in | ERR2513880 | Pre-XDR-TB | lineage2.2.1 | gb | SRR5709860 | Pre-XDR-TB | lineage2.2.1 | th | ERR4817599 | HR-TB | lineage2.2.1 | gb | SRR5837710 | Pre-XDR-TB | lineage2.2.1.1 | th | ERR4797458 | XDR-TB | lineage3 | in | ERR108469 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4822338 | MDR-TB | lineage2.2.1 | de | ERR7911384 | MDR-TB | lineage2.2.1 | us | ERR7911111 | MDR-TB | lineage2.2.1 | vn | ERR4831909 | MDR-TB | lineage2.2.1 | vn | ERR4831000 | MDR-TB | lineage2.2.1 | de | SRR2100870 | MDR-TB | lineage2.2.1 | None | SRR5065339 | MDR-TB | lineage2.2.1 | vn | ERR4810992 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4830300 | HR-TB | lineage2.2.1 | vn | ERR4831791 | HR-TB | lineage2.2.1;lineage1.1.1 | vn | ERR4799344 | Pre-XDR-TB | lineage2.2.1 | in | SRR6397615 | HR-TB | lineage2.2.1 | ca | ERR108510 | MDR-TB | lineage2.2.1 | ru | ERR8665983 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414975 | Pre-XDR-TB | lineage2.2.1 | se | ERR4831957 | MDR-TB | lineage2.2.1 | vn | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4798829 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR2514549 | Other | lineage2.2.1 | gb | SAMN02584676 | MDR-TB | lineage2.2.1 | md | SRR6280289 | HR-TB | lineage2.2.1 | cn | SRR5065637 | HR-TB | lineage2.2.1 | vn | ERR019860 | MDR-TB | lineage2.2.1 | None | ERR2516858 | MDR-TB | lineage2.2.1 | gb | SAMN02628490 | Pre-XDR-TB | lineage2.2.1 | ir | ERR1035098 | Pre-XDR-TB | lineage2.2.1 | vn | SRR5709909 | Pre-XDR-TB | lineage2.2.1 | th | ERR4831414 | MDR-TB | lineage2.2.1 | de | ERR4816874 | HR-TB | lineage2.2.1 | gb | ERR4828721 | HR-TB | lineage2.2.1 | vn | SAMN02419649 | Pre-XDR-TB | lineage2.2.1 | by | ERR4815988 | MDR-TB | lineage2.2.1 | gb | ERR4798209 | MDR-TB | lineage2.2.1.1 | in | ERR4832039 | HR-TB | lineage2.2.1 | vn | ERR4831931 | MDR-TB | lineage2.2.1 | vn | ERR133861 | MDR-TB | lineage2.2.1 | ru | SRR5065631 | HR-TB | lineage2.2.1 | vn | ERR8976011 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822375 | HR-TB | lineage4.8 | kg | ERR3287474 | HR-TB | lineage4.3.4.2 | pe | ERR2516473 | MDR-TB | lineage4.2.1.1 | nl |
---|