Rv2477c - c.-169A>C
Drug resistance types
69 Sensitive
0 RR-TB
7 HR-TB
10 MDR-TB
11 Pre-XDR-TB
3 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| lineage3 | 16 |
| lineage4.5 | 7 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1 | 30 |
| lineage4.8 | 5 |
| lineage4.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1.1;lineage4.3.3 | 1 |
| lineage1.1.2 | 2 |
| lineage1.2.1.2.1 | 5 |
| lineage2.2.1.1 | 7 |
| lineage4.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3 | 1 |
| La1.2.BCG | 1 |
| lineage1.1.1 | 2 |
| lineage1.1.2;lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21732805 | Sensitive | lineage4.9 | None | SRR21732529 | Sensitive | lineage3 | None | SRR25827373 | Other | lineage3 | None | SRR21732550 | Sensitive | lineage4.9 | None | SAMN03246623 | MDR-TB | lineage4.5 | cn | ERR11081272 | HR-TB | lineage4.2.2.1 | None | SRR17657996 | Sensitive | lineage3 | None | SRR25827448 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732514 | Sensitive | lineage3 | None | ERR10465754 | Sensitive | lineage4.8 | None | SRR27107268 | Sensitive | lineage4.3 | None | SRR21732454 | Sensitive | lineage2.2.1.2 | None | SRR25827730 | MDR-TB | lineage2.2.1.1;lineage4.3.3 | None | SRR21732434 | Other | lineage1.1.2 | None | SRR21732429 | Other | lineage1.2.1.2.1 | None | SRR21732134 | Sensitive | lineage2.2.1 | None | SRR21732526 | Sensitive | lineage2.2.1.1 | None | SRR22251943 | Sensitive | lineage1.2.1.2.1 | None | SRR25827570 | Pre-XDR-TB | lineage2.2.1 | None | SRR21733381 | Sensitive | lineage4.8 | None | SRR25827386 | MDR-TB | lineage4.2.2 | None | SRR25827644 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21732189 | Sensitive | lineage2.2.1 | None | SRR27450041 | Sensitive | lineage2.2.1 | None | SRR25827357 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3 | None | SRR21733111 | Sensitive | lineage3 | None | SRR21733243 | Sensitive | lineage4.3.4.2.1 | None | SRR21733380 | Sensitive | lineage3 | None | SRR16088545 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450651 | HR-TB | lineage2.2.1 | None | SRR21733089 | Sensitive | lineage4.5 | None | SRR21732915 | Sensitive | lineage3 | None | SRR21732807 | Sensitive | lineage2.2.1.1 | None | SRR28351341 | Other | lineage4.1.1.1 | None | SRR21732553 | Sensitive | lineage4.3.4.2.1 | None | SRR21732875 | Other | lineage2.2.1 | None | ERR11083113 | Sensitive | lineage4.1.2.1 | None | SRR25827434 | Sensitive | lineage1.2.2.2 | None | SRR25827601 | XDR-TB | lineage2.2.1.1 | None | SRR25827804 | Pre-XDR-TB | lineage2.2.1;lineage3.1 | None | SRR22251696 | Sensitive | lineage3.1.2.1 | None | SRR21732523 | HR-TB | lineage2.2.1 | None | SRR27450163 | Sensitive | lineage4.1.2 | None | SRR27450217 | Sensitive | lineage2.2.1.1 | None | SRR22251631 | Sensitive | lineage2.2.1 | None | SRR25827627 | MDR-TB | lineage2.2.1 | None | SRR21732236 | Sensitive | lineage4.9 | None | SRR21732530 | Other | lineage1.2.1 | None | SRR21732626 | Sensitive | lineage2.2.1.1 | None | SRR22251928 | HR-TB | lineage1.2.1.2.1 | None | SRR21733103 | Sensitive | lineage1.1.3.3 | None | SRR27450201 | Sensitive | lineage4.1.1.3 | None | SRR21732678 | Sensitive | lineage4.3.3 | None | SRR21732908 | Sensitive | lineage4.8 | None | SRR27450598 | Sensitive | lineage3 | None | SRR21732619 | Other | lineage3 | None | SRR27450638 | Sensitive | lineage2.2.1 | None | SRR1723908 | MDR-TB | lineage4.5 | None | SRR21732687 | Sensitive | lineage1.1.1.1 | None | SRR24498059 | XDR-TB | lineage3 | None | SRR16088307 | Sensitive | lineage4.8 | None | SRR22251634 | Sensitive | lineage1.2.1.2.1 | None | SRR25827623 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088385 | Sensitive | lineage4.1.2.1 | None | SRR22249436 | Sensitive | lineage4.5 | None | SRR21732615 | Sensitive | lineage3 | None | SRR21732179 | Sensitive | lineage1.1.2 | None | SRR27450541 | Sensitive | lineage3 | None | SRR21732606 | Sensitive | lineage2.2.1 | None | SRR21732620 | Sensitive | lineage4.9.1 | None | SRR1723907 | MDR-TB | lineage4.5 | None | SRR22251626 | Sensitive | lineage4.1.2.1 | None | SRR21733097 | Sensitive | lineage2.2.1 | None | SRR27450493 | Other | lineage2.2.1 | None | SRR25827788 | Pre-XDR-TB | lineage2.2.1 | None | DRR474189 | Sensitive | lineage2.2.1 | None | SRR16088040 | Other | lineage2.2.1 | None | SRR27450650 | Other | lineage2.2.1 | None | SRR27449999 | Sensitive | lineage4.4.2 | None | SRR22251862 | Sensitive | lineage4.1.2.1 | None | SRR25827484 | Pre-XDR-TB | lineage1;lineage2.2.1;lineage3;lineage4 | None | SRR22251856 | Sensitive | lineage2.2.1 | None | SRR27450599 | Sensitive | lineage2.2.1 | None | SRR21732978 | Sensitive | lineage1.2.1.2.1 | None | ERR2179648 | MDR-TB | lineage4.5 | cn | SRR21733093 | HR-TB | lineage2.2.1 | None | SRR21733115 | Sensitive | lineage4.1.2.1 | None | SRR21732806 | Sensitive | lineage2.2.1 | None | SRR25827616 | Pre-XDR-TB | lineage3 | None | SRR27450538 | Sensitive | lineage4.3.4.2.1 | None | SRR21732642 | Sensitive | lineage4.3.4.2.1 | None | ERR2027301 | Sensitive | lineage2.2.1 | None | SRR25827637 | Sensitive | lineage3 | None | SRR26112376 | Sensitive | lineage4.6.2.2 | None | SRR21732547 | MDR-TB | lineage4.1.2.1 | None | SRR27450467 | Sensitive | lineage2.2.1 | None | SRR22251322 | Other | lineage3 | None | SRR21733384 | Sensitive | lineage1.1.3 | None | SRR27450603 | Other | La1.2.BCG | None | SRR22251831 | Sensitive | lineage1.1.1 | None | SRR22251661 | Sensitive | lineage2.2.1.1 | None | SRR27450643 | HR-TB | lineage2.2.1 | None | SRR21732385 | Sensitive | lineage2.2.1 | None | SRR16088320 | Other | lineage4.8 | None | SRR25827865 | Pre-XDR-TB | lineage1.1.2;lineage3 | None | SRR28385881 | MDR-TB | lineage2.2.2 | None | SRR21732917 | Sensitive | lineage4.1 | None | SRR16088508 | HR-TB | lineage2.2.1 | None | SRR6824300 | MDR-TB | lineage4.5 | cn | SRR27450195 | Sensitive | lineage3 | None | SRR25827395 | Pre-XDR-TB | lineage2.2.1 | None | SRR21733040 | Sensitive | lineage4.1.2.1 | None | SRR21733114 | Sensitive | lineage1.1.1 | None |
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