lineage | Count |
---|---|
lineage4.3 | 1 |
lineage4.1.2.1 | 7 |
lineage1.1.3.3 | 1 |
lineage4.1.1.3 | 3 |
lineage4.5 | 7 |
lineage2.2.1 | 33 |
lineage1.2.1.2.1 | 6 |
lineage1.1.2 | 3 |
lineage3 | 18 |
lineage4.3.4.2.1 | 6 |
lineage2.2.1.1 | 11 |
lineage4.1.1 | 1 |
lineage1.1.2;lineage2.2.1;lineage3 | 1 |
lineage4.1 | 1 |
lineage1.1.1 | 3 |
lineage4.9 | 3 |
La1.7.1 | 1 |
lineage2.2.2 | 2 |
lineage4.8 | 9 |
lineage3.1.2.1 | 1 |
lineage1.1.2;lineage3 | 1 |
lineage1.2.2.2 | 1 |
lineage1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage2.2.1.2 | 1 |
lineage4.2.2.1 | 1 |
lineage4.2.2 | 1 |
lineage1.1.3 | 1 |
La1.2.BCG | 1 |
lineage4.9.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.4.2 | 1 |
lineage2.2.1.1;lineage4.3.3 | 1 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage1.1.3.1 | 1 |
lineage1.1.1.1 | 1 |
lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
lineage2.2.1;lineage3.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 138 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR27107268 | Sensitive | lineage4.3 | None |
SRR22251862 | Sensitive | lineage4.1.2.1 | None |
SRR21733103 | Sensitive | lineage1.1.3.3 | None |
SRR27450201 | Sensitive | lineage4.1.1.3 | None |
SRR1723908 | MDR-TB | lineage4.5 | None |
SRR29093248 | Pre-XDR-TB | lineage4.1.1.3 | None |
SRR27450041 | Sensitive | lineage2.2.1 | None |
SRR27450638 | Sensitive | lineage2.2.1 | None |
SRR22251943 | Sensitive | lineage1.2.1.2.1 | None |
SRR28868723 | Sensitive | lineage1.1.2 | None |
SRR25827616 | Pre-XDR-TB | lineage3 | None |
SRR27450538 | Sensitive | lineage4.3.4.2.1 | None |
DRR474189 | Sensitive | lineage2.2.1 | None |
SRR28868410 | Sensitive | lineage2.2.1.1 | None |
SRR21733115 | Sensitive | lineage4.1.2.1 | None |
SRR21733093 | HR-TB | lineage2.2.1 | None |
SRR29093972 | Sensitive | lineage2.2.1 | None |
SRR26112724 | Sensitive | lineage4.1.1 | None |
SRR21733380 | Sensitive | lineage3 | None |
SRR25827357 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3 | None |
SRR27450651 | HR-TB | lineage2.2.1 | None |
SRR25827623 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16088385 | Sensitive | lineage4.1.2.1 | None |
SRR21732806 | Sensitive | lineage2.2.1 | None |
SRR21732626 | Sensitive | lineage2.2.1.1 | None |
SRR21733089 | Sensitive | lineage4.5 | None |
SRR21732915 | Sensitive | lineage3 | None |
SRR21732917 | Sensitive | lineage4.1 | None |
SRR21732807 | Sensitive | lineage2.2.1.1 | None |
SRR28868532 | Sensitive | lineage1.1.1 | None |
SRR21732550 | Sensitive | lineage4.9 | None |
SRR29093495 | Other | La1.7.1 | None |
SRR21732236 | Sensitive | lineage4.9 | None |
SRR21732805 | Sensitive | lineage4.9 | None |
SRR21732978 | Sensitive | lineage1.2.1.2.1 | None |
SRR29093278 | Pre-XDR-TB | lineage2.2.2 | None |
SRR16088307 | Sensitive | lineage4.8 | None |
SRR21732615 | Sensitive | lineage3 | None |
SRR22251626 | Sensitive | lineage4.1.2.1 | None |
SRR22249436 | Sensitive | lineage4.5 | None |
SRR21732514 | Sensitive | lineage3 | None |
SRR22251696 | Sensitive | lineage3.1.2.1 | None |
ERR2179648 | MDR-TB | lineage4.5 | cn |
SRR22251856 | Sensitive | lineage2.2.1 | None |
SRR25827865 | Pre-XDR-TB | lineage1.1.2;lineage3 | None |
SRR25827395 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22251631 | Sensitive | lineage2.2.1 | None |
SAMN03246623 | MDR-TB | lineage4.5 | cn |
SRR27450598 | Sensitive | lineage3 | None |
SRR17657996 | Sensitive | lineage3 | None |
SRR27450217 | Sensitive | lineage2.2.1.1 | None |
SRR25827434 | Sensitive | lineage1.2.2.2 | None |
SRR21732530 | Other | lineage1.2.1 | None |
SRR22251322 | Other | lineage3 | None |
SRR21732179 | Sensitive | lineage1.1.2 | None |
SRR21732678 | Sensitive | lineage4.3.3 | None |
SRR21732454 | Sensitive | lineage2.2.1.2 | None |
SRR29016894 | HR-TB | lineage2.2.1.1 | None |
SRR22251928 | HR-TB | lineage1.2.1.2.1 | None |
SRR21732908 | Sensitive | lineage4.8 | None |
SRR25827570 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11081272 | HR-TB | lineage4.2.2.1 | None |
SRR21732434 | Other | lineage1.1.2 | None |
SRR28868801 | Sensitive | lineage2.2.1 | None |
SRR25827386 | MDR-TB | lineage4.2.2 | None |
SRR25827644 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR21733111 | Sensitive | lineage3 | None |
SRR21733243 | Sensitive | lineage4.3.4.2.1 | None |
SRR21732189 | Sensitive | lineage2.2.1 | None |
SRR21733384 | Sensitive | lineage1.1.3 | None |
SRR28858492 | MDR-TB | lineage3 | None |
SRR27450603 | HR-TB | La1.2.BCG | None |
SRR22251661 | Sensitive | lineage2.2.1.1 | None |
SRR29096607 | Sensitive | lineage4.3.4.2.1 | None |
SRR21732620 | Sensitive | lineage4.9.1 | None |
SRR21732606 | Sensitive | lineage2.2.1 | None |
SRR28385881 | MDR-TB | lineage2.2.2 | None |
SRR25827788 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28351341 | Other | lineage4.1.1.1 | None |
SRR21732619 | Other | lineage3 | None |
SRR21732134 | Sensitive | lineage2.2.1 | None |
SRR21733381 | Sensitive | lineage4.8 | None |
SRR21732523 | HR-TB | lineage2.2.1 | None |
SRR28868531 | Sensitive | lineage2.2.1.1 | None |
SRR28868891 | Sensitive | lineage2.2.1.1 | None |
SRR27450467 | Sensitive | lineage2.2.1 | None |
SRR21733114 | Sensitive | lineage1.1.1 | None |
SRR1723907 | MDR-TB | lineage4.5 | None |
SRR21732553 | Sensitive | lineage4.3.4.2.1 | None |
SRR27450195 | Sensitive | lineage3 | None |
ERR11083113 | Sensitive | lineage4.1.2.1 | None |
SRR25827601 | XDR-TB | lineage2.2.1.1 | None |
SRR22251634 | Sensitive | lineage1.2.1.2.1 | None |
SRR27449999 | Sensitive | lineage4.4.2 | None |
SRR29093783 | Pre-XDR-TB | lineage4.3.4.2.1 | None |
SRR29096739 | MDR-TB | lineage4.8 | None |
SRR29093532 | Pre-XDR-TB | lineage4.8 | None |
SRR16088545 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10465754 | Sensitive | lineage4.8 | None |
SRR27450493 | Other | lineage2.2.1 | None |
SRR28868402 | Sensitive | lineage3 | None |
SRR25827730 | MDR-TB | lineage2.2.1.1;lineage4.3.3 | None |
SRR21732429 | Other | lineage1.2.1.2.1 | None |
SRR16088508 | HR-TB | lineage2.2.1 | None |
SRR25827373 | Other | lineage3 | None |
SRR28868435 | Other | lineage2.2.1 | None |
SRR29017173 | Pre-XDR-TB | lineage4.8 | None |
SRR25827637 | Sensitive | lineage3 | None |
SRR26112376 | Sensitive | lineage4.6.2.2 | None |
SRR29093862 | MDR-TB | lineage4.1.1.3 | None |
SRR24498059 | XDR-TB | lineage3 | None |
SRR29093915 | Sensitive | lineage4.3.4.2 | None |
SRR22251831 | Sensitive | lineage1.1.1 | None |
SRR28858578 | Sensitive | lineage1.1.3.1 | None |
SRR27450643 | HR-TB | lineage2.2.1 | None |
SRR27450599 | Sensitive | lineage2.2.1 | None |
SRR16088320 | Other | lineage4.8 | None |
SRR21732687 | Sensitive | lineage1.1.1.1 | None |
SRR21732642 | Sensitive | lineage4.3.4.2.1 | None |
SRR16088040 | Other | lineage2.2.1 | None |
SRR21732385 | Sensitive | lineage2.2.1 | None |
SRR6824300 | MDR-TB | lineage4.5 | cn |
SRR21732547 | MDR-TB | lineage4.1.2.1 | None |
SRR25827484 | Pre-XDR-TB | lineage1;lineage2.2.1;lineage3;lineage4 | None |
SRR28868339 | Sensitive | lineage1.2.1.2.1 | None |
SRR25827804 | Pre-XDR-TB | lineage2.2.1;lineage3.1 | None |
SRR27450541 | Sensitive | lineage3 | None |
SRR21732529 | Sensitive | lineage3 | None |
SRR27450163 | Sensitive | lineage4.1.2 | None |
SRR21732875 | Other | lineage2.2.1 | None |
SRR21732526 | Sensitive | lineage2.2.1.1 | None |
SRR21733040 | Sensitive | lineage4.1.2.1 | None |
SRR21733097 | Sensitive | lineage2.2.1 | None |
ERR2027301 | Sensitive | lineage2.2.1 | None |
SRR28858505 | HR-TB | lineage4.8 | None |
SRR25827448 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25827627 | MDR-TB | lineage2.2.1 | None |
SRR27450650 | Other | lineage2.2.1 | None |