lineage | Count |
---|---|
lineage1.2.1.2.1 | 9 |
lineage1.1.1 | 2 |
lineage2.2.1 | 29 |
lineage3 | 10 |
lineage3.1.2 | 3 |
lineage4.3.3 | 3 |
lineage1.1.2 | 8 |
lineage4.5 | 2 |
lineage4.1.1.3 | 3 |
La1.2.BCG | 1 |
lineage2.2.1.1 | 2 |
lineage4.6.2.2 | 1 |
lineage4.1.2.1 | 3 |
lineage2.2.2 | 2 |
lineage1.1.1.1 | 1 |
lineage4.8 | 2 |
lineage4.3.4.2.1 | 1 |
La3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1 | 1 |
lineage1.2.1.2 | 1 |
lineage4.6.1.2 | 1 |
lineage4.1.2 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | SRR21732389 | Sensitive | lineage1.2.1.2.1 | None | SRR22251831 | Sensitive | lineage1.1.1 | None | SRR22251149 | HR-TB | lineage2.2.1 | None | SRR21732606 | Sensitive | lineage2.2.1 | None | SRR22251866 | MDR-TB | lineage2.2.1 | None | SRR28351262 | MDR-TB | lineage2.2.1 | None | SRR21732340 | HR-TB | lineage2.2.1 | None | SRR21732511 | Sensitive | lineage2.2.1 | None | SRR21732385 | Sensitive | lineage2.2.1 | None | SRR22251600 | Sensitive | lineage1.2.1.2.1 | None | SRR27450642 | Sensitive | lineage2.2.1 | None | SRR29093224 | Sensitive | lineage2.2.1 | None | SRR16915710 | Sensitive | lineage2.2.1 | None | SRR22251920 | Sensitive | lineage1.2.1.2.1 | None | SRR22251925 | Sensitive | lineage3 | None | SRR24255898 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093469 | Sensitive | lineage2.2.1 | None | SRR22251948 | Sensitive | lineage2.2.1 | None | SRR22251117 | Sensitive | lineage1.2.1.2.1 | None | SRR22251138 | Sensitive | lineage3.1.2 | None | SRR22251868 | Sensitive | lineage3 | None | SRR21733062 | Sensitive | lineage2.2.1 | None | SRR24255891 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112405 | Sensitive | lineage4.3.3 | None | SRR25827448 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827347 | Other | lineage3.1.2 | None | SRR22251835 | Sensitive | lineage2.2.1 | None | SRR21733112 | Other | lineage3 | None | SRR21732434 | Other | lineage1.1.2 | None | SRR21732396 | Sensitive | lineage2.2.1 | None | SRR21732177 | HR-TB | lineage1.2.1.2.1 | None | SRR22251930 | Sensitive | lineage4.5 | None | SRR21732660 | Sensitive | lineage1.1.2 | None | SRR22251310 | Sensitive | lineage2.2.1 | None | SRR21732552 | Sensitive | lineage4.1.1.3 | None | SRR21732619 | Other | lineage3 | None | SRR22251644 | Sensitive | lineage3 | None | SRR27450658 | Sensitive | lineage3 | None | SRR28858588 | Sensitive | lineage4.3.3 | None | SRR28858575 | Sensitive | lineage4.3.3 | None | SRR27450472 | HR-TB | La1.2.BCG | None | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251854 | Sensitive | lineage2.2.1.1 | None | SRR22251924 | Sensitive | lineage2.2.1 | None | SRR22251147 | Sensitive | lineage2.2.1.1 | None | SRR22251829 | HR-TB | lineage4.6.2.2 | None | SRR22251624 | MDR-TB | lineage3 | None | SRR22251982 | Sensitive | lineage1.2.1.2.1 | None | SRR27450160 | Sensitive | lineage3 | None | SRR22251938 | Sensitive | lineage2.2.1 | None | SRR21733048 | RR-TB | lineage2.2.1 | None | SRR22251561 | Sensitive | lineage1.1.2 | None | SRR22251323 | Sensitive | lineage4.1.1.3 | None | SRR21733088 | Sensitive | lineage1.1.2 | None | SRR21733058 | Sensitive | lineage4.1.2.1 | None | SRR22251628 | HR-TB | lineage1.2.1.2.1 | None | SRR28868632 | Sensitive | lineage1.1.2 | None | SRR21732677 | Other | lineage2.2.1 | None | SRR22251091 | Other | lineage1.1.2 | None | SRR27450386 | Sensitive | lineage1.2.1.2.1 | None | SRR22251745 | Sensitive | lineage2.2.1 | None | SRR22251961 | HR-TB | lineage2.2.1 | None | SRR26112198 | Sensitive | lineage4.1.2.1 | None | SRR26112213 | Sensitive | lineage4.5 | None | SRR29093941 | HR-TB | lineage2.2.2 | None | SRR26937133 | Sensitive | lineage1.1.1.1 | None | SRR29093731 | XDR-TB | lineage2.2.2 | None | SRR21733114 | Sensitive | lineage1.1.1 | None | SRR22251148 | Other | lineage3.1.2 | None | SRR22251330 | Sensitive | lineage2.2.1 | None | SRR22251932 | Sensitive | lineage4.1.1.3 | None | SRR22251078 | Sensitive | lineage1.2.1.2.1 | None | SRR28868633 | Sensitive | lineage4.8 | None | SRR21732281 | Sensitive | lineage4.3.4.2.1 | None | SRR27450479 | Other | La3 | None | SRR22251127 | Sensitive | lineage4.2.2.2 | None | SRR22251086 | Sensitive | lineage4.1.1 | None | SRR22251630 | Sensitive | lineage1.2.1.2 | None | SRR22251625 | Sensitive | lineage4.1.2.1 | None | SRR21732304 | Sensitive | lineage2.2.1 | None | SRR17658013 | MDR-TB | lineage4.6.1.2 | None | SRR25827616 | Pre-XDR-TB | lineage3 | None | SRR29017646 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251944 | Sensitive | lineage1.1.2 | None | SRR27450127 | Sensitive | lineage4.8 | None | SRR22251701 | Sensitive | lineage4.1.2 | None | SRR21732202 | HR-TB | lineage1.1.3.1 | None | SRR22251986 | Sensitive | lineage1.1.2 | None | SRR22251589 | Other | lineage3 | None |
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