Rv2680 - c.-101_-50delGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Drug resistance types
73 Sensitive
1 RR-TB
15 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 58 |
| lineage1.2.2.2 | 12 |
| lineage1.2.1.2.1 | 18 |
| lineage1.2.1.2 | 2 |
| lineage1.1.1.1 | 2 |
| lineage1.1.1 | 4 |
| La1.7.1 | 3 |
| lineage1.2.2.1 | 3 |
| lineage1.1.2;lineage3.1.1 | 2 |
| lineage1.1.3.1 | 3 |
| lineage4.8 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19428571 | Sensitive | lineage1.1.2 | None | SRR8380882 | Sensitive | lineage1.2.2.2 | in | SRR19317592 | Sensitive | lineage1.2.1.2.1 | None | SRR19320516 | Other | lineage1.1.2 | None | SRR19324981 | Sensitive | lineage1.2.2.2 | None | SRR8380896 | MDR-TB | lineage1.1.2 | in | SRR8380900 | Other | lineage1.1.2 | in | SRR8380924 | Other | lineage1.1.2 | in | SRR19325517 | Sensitive | lineage1.2.2.2 | None | SRR8380901 | Sensitive | lineage1.1.2 | in | SRR19325554 | Sensitive | lineage1.1.2 | None | SRR19406463 | Sensitive | lineage1.1.2 | None | SRR19428622 | Sensitive | lineage1.1.2 | None | SRR8380922 | Sensitive | lineage1.1.2 | in | SRR8380888 | Sensitive | lineage1.1.2 | in | SRR8380938 | MDR-TB | lineage1.1.2 | in | SRR19325571 | Sensitive | lineage1.2.1.2 | None | SRR19324975 | Sensitive | lineage1.2.1.2.1 | None | SRR8380868 | Sensitive | lineage1.1.2 | in | SRR8380871 | Sensitive | lineage1.1.2 | in | SRR8380909 | HR-TB | lineage1.1.2 | in | SRR8380947 | MDR-TB | lineage1.1.2 | in | SRR19325578 | HR-TB | lineage1.1.1.1 | None | SRR8380943 | MDR-TB | lineage1.1.2 | in | SRR8380911 | Sensitive | lineage1.1.2 | in | SRR19317574 | Sensitive | lineage1.2.1.2.1 | None | SRR8380910 | Other | lineage1.1.2 | in | SRR19324991 | Sensitive | lineage1.2.1.2.1 | None | SRR8380941 | Sensitive | lineage1.1.2 | in | ERR552800_ERR552799 | Sensitive | lineage1.1.1 | None | SRR19325525 | Sensitive | lineage1.2.1.2.1 | None | SRR8380928 | MDR-TB | lineage1.1.2 | in | SRR8380869 | Sensitive | lineage1.2.2.2 | in | SRR19451490 | Sensitive | lineage1.2.2.2 | None | SRR20551049 | HR-TB | La1.7.1 | None | SRR19320498 | Sensitive | lineage1.1.2 | None | SRR19428621 | MDR-TB | lineage1.2.2.2 | None | SRR8380878 | Sensitive | lineage1.1.2 | in | SRR19415648 | Sensitive | lineage1.2.2.1 | None | SRR19320534 | Other | lineage1.1.2 | None | SRR8380913 | Sensitive | lineage1.1.2 | in | SRR8380927 | Sensitive | lineage1.2.2.2 | in | SRR8380889 | RR-TB | lineage1.1.2 | in | SRR19325667 | Sensitive | lineage1.1.1 | None | SRR19324802 | Sensitive | lineage1.2.2.2 | None | SRR19317567 | Sensitive | lineage1.1.2 | None | SRR19324989 | Sensitive | lineage1.2.1.2.1 | None | SRR19325560 | Sensitive | lineage1.1.1 | None | SRR19325570 | Sensitive | lineage1.2.1.2.1 | None | SRR19428582 | Sensitive | lineage1.1.2 | None | SRR8380866 | Pre-XDR-TB | lineage1.1.2 | in | SRR8380879 | Sensitive | lineage1.2.2.2 | in | SRR19317571 | Sensitive | lineage1.2.1.2.1 | None | SRR19318154 | Sensitive | lineage1.2.2.2 | None | SRR8380897 | Sensitive | lineage1.1.2 | in | SRR8380931 | Sensitive | lineage1.1.2 | in | SRR19428528 | Sensitive | lineage1.1.2 | None | SRR8380907 | Sensitive | lineage1.1.2 | in | SRR8380870 | Sensitive | lineage1.1.2 | in | SRR8380953 | Other | lineage1.2.2.1 | in | SRR19324969 | Sensitive | lineage1.2.1.2.1 | None | SRR19428508 | Sensitive | lineage1.1.2 | None | SRR8380902 | Sensitive | lineage1.1.2 | in | SRR19428616 | Sensitive | lineage1.1.2;lineage3.1.1 | None | ERR9027239 | Sensitive | lineage1.1.2 | None | SRR8380929 | HR-TB | lineage1.1.2 | in | SRR8380925 | HR-TB | lineage1.2.2.1 | in | SRR8380923 | Other | lineage1.1.2 | in | SRR19428619 | Sensitive | lineage1.1.2;lineage3.1.1 | None | SRR19320529 | Sensitive | lineage1.2.1.2.1 | None | SRR8380940 | Other | lineage1.1.2 | in | SRR19325545 | Sensitive | lineage1.2.1.2.1 | None | SRR19320511 | Sensitive | lineage1.1.3.1 | None | SRR19320501 | Sensitive | lineage1.2.1.2 | None | SRR8380860 | Sensitive | lineage1.1.2 | in | SRR8380920 | Other | lineage1.1.2 | in | SRR8380946 | MDR-TB | lineage1.1.2 | in | SRR20551048 | HR-TB | La1.7.1 | None | SRR20551052 | HR-TB | La1.7.1 | None | SRR19325523 | Sensitive | lineage1.2.1.2.1 | None | SRR19325524 | Sensitive | lineage1.2.1.2.1 | None | SRR19325576 | Sensitive | lineage1.1.2 | None | SRR19355746 | Sensitive | lineage1.1.2 | None | SRR8380908 | HR-TB | lineage1.1.2 | in | SRR16058677 | HR-TB | lineage1.2.1.2.1 | None | SRR19320521 | Sensitive | lineage1.2.2.2 | None | SRR8380899 | Sensitive | lineage1.1.2 | in | SRR19320495 | HR-TB | lineage1.2.1.2.1 | None | SRR19428533 | HR-TB | lineage1.1.2 | None | SRR8380876 | MDR-TB | lineage1.1.2 | in | SRR8380883 | Other | lineage1.1.2 | in | SRR8380885 | Sensitive | lineage1.1.2 | in | SRR19320532 | Sensitive | lineage1.2.2.2 | None | SRR19324804 | HR-TB | lineage1.1.1.1 | None | SRR19428564 | Sensitive | lineage1.1.2 | None | SRR8380886 | Sensitive | lineage1.1.2 | in | SRR19324813 | Other | lineage4.8 | None | SRR8380858 | Sensitive | lineage1.1.2 | in | SRR19324807 | Sensitive | lineage1.1.3.2 | None | SRR19428553 | Sensitive | lineage1.1.3.2 | None | SRR19428605 | Other | lineage1.1.2 | None | SRR8380918 | Sensitive | lineage1.1.2 | in | SRR8380857 | HR-TB | lineage1.1.2 | in | SRR8380880 | Sensitive | lineage1.1.1 | in | SRR19325553 | Sensitive | lineage1.1.3.1 | None | ERR3148199 | MDR-TB | lineage4.3.3 | mx | SRR19357411 | Sensitive | lineage1.1.2 | None | SRR19315461 | HR-TB | lineage1.1.3.1 | None | SRR19324971 | Sensitive | lineage1.2.1.2.1 | None | SRR19317582 | HR-TB | lineage1.2.1.2.1 | None | SRR19324985 | Sensitive | lineage1.2.1.2.1 | None |
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