Rv2680 - c.-101_-51delTGACCTCCGCCGGCGACGATGCAGAGCGCAGCGATGAGGAGGAGCGGCGCT


Drug resistance types
461 Sensitive 12 RR-TB 91 HR-TB 98 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 87 Other
lineage Counts
lineage Count
lineage1.2.2.2 77
lineage1.2.1.2.1 290
lineage4.9 9
lineage1.1.1 29
lineage1.1.2 63
lineage1.1.1.1 83
lineage2.2.2 1
lineage1.1.3.1 30
lineage4.8 1
lineage1.1.3.2 25
lineage4.4.1.1.1 4
lineage1.2.1.2 77
lineage1.1.1.1;lineage6.1.3 1
lineage2.2.1 5
lineage1.2.2.1 23
lineage1.1.3.3 7
lineage4.1.1.3 2
lineage4.7 3
lineage4.5 4
lineage4 4
lineage4.3.3 2
lineage1.1.2;lineage1.1.3.1 1
lineage1.2.2 1
lineage1.1.3 2
lineage1.1.1.1;lineage4.1 1
lineage1.2.1.1 1
lineage4.1.2.1 1
lineage4.1.1 2
lineage1.2.2.1;lineage4.9 1
La1.7.1 3
lineage2.1 1
2
lineage1.2.1.2.1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 757
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4407562 HR-TB lineage1.2.2.2 None
ERR3256110 MDR-TB lineage1.2.1.2.1 ph
SRR16099296 Sensitive lineage1.2.2.2 None
SRR7496539 Sensitive lineage1.2.1.2.1 us
SRR27705900 Sensitive lineage4.9 None
SRR16370601 Sensitive lineage1.1.1 None
ERR2660466 Other lineage1.1.2 None
SRR26112043 Pre-XDR-TB lineage1.2.1.2.1 None
SRR28409573 Sensitive lineage1.2.2.2 None
ERR2515249 MDR-TB lineage1.2.2.2 za
DRR261096 HR-TB lineage1.1.1.1 None
DRR261125 Sensitive lineage1.1.1 None
ERR11811448 HR-TB lineage1.2.2.2 None
SRR19221462 Sensitive lineage1.2.2.2 None
ERR3256253 Sensitive lineage1.2.1.2.1 ph
DRR189013 Sensitive lineage2.2.2 None
ERR3256136 Sensitive lineage1.2.1.2.1 ph
SRR21747038 MDR-TB lineage1.1.3.1 None
ERR4195745 Sensitive lineage4.8 None
DRR188941 Sensitive lineage1.2.1.2.1 None
ERR13252673 Sensitive lineage1.2.1.2.1 None
ERR10748168 Other lineage1.1.3.2 None
ERR7902741 Other lineage1.2.1.2.1 None
DRR261090 Sensitive lineage1.1.1.1 None
ERR13291567 Sensitive lineage1.2.1.2.1 None
SRR26112265 HR-TB lineage1.2.1.2.1 None
ERR2660535 Sensitive lineage1.2.2.2 None
SRR6855677 HR-TB lineage4.4.1.1.1 None
ERR3256164 MDR-TB lineage1.2.1.2.1 ph
ERR9125470 MDR-TB lineage1.2.1.2 None
SRR19428564 Sensitive lineage1.1.2 None
ERR9786009 Other lineage1.1.1.1;lineage6.1.3 None
DRR130224 Sensitive lineage2.2.1 None
SRR16058509 HR-TB lineage1.2.1.2.1 None
DRR130082 MDR-TB lineage1.2.1.2 None
DRR189090 HR-TB lineage4.9 None
ERR3256241 MDR-TB lineage1.2.1.2 ph
DRR188865 Sensitive lineage1.2.1.2.1 None
SRR26112495 Sensitive lineage1.1.2 None
ERR2515878 Sensitive lineage1.2.2.1 za
DRR261030 Sensitive lineage1.1.1.1 None
SRR6982499 MDR-TB lineage1.2.2.2 None
ERR9125858 Sensitive lineage1.2.1.2.1 None
SRR30180221 MDR-TB lineage1.2.1.2 None
SRR30180221 MDR-TB lineage1.2.1.2 None
ERR2660460 Sensitive lineage1.2.2.2 None
ERR7902606 HR-TB lineage1.1.2 None
ERR3256149 Sensitive lineage1.2.1.2.1 ph
SRR21711109 Sensitive lineage1.1.3.1 None
ERR3256153 HR-TB lineage1.2.1.2 ph
DRR473969 Sensitive lineage1.2.1.2.1 None
SRR18911232 Sensitive lineage1.2.2.2 None
SRR21711112 HR-TB lineage1.2.1.2.1 None
ERR7902746 Sensitive lineage1.2.1.2.1 None
ERR2660437 Sensitive lineage1.2.2.2 None
SRR29053437 Other lineage1.2.1.2.1 None
DRR188774 Sensitive lineage1.2.1.2.1 None
SRR16100709 Sensitive lineage1.1.2 None
ERR13291601 Sensitive lineage1.1.3.1 None
ERR2199942 Sensitive lineage1.2.2.1 sz
SRR21576712 MDR-TB lineage1.2.1.2 None
ERR3256147 Sensitive lineage1.2.1.2.1 ph
ERR3256193 HR-TB lineage1.2.1.2.1 ph
ERR3256220 MDR-TB lineage1.2.1.2.1 ph
ERR9657182 Sensitive lineage1.2.1.2.1 None
DRR261174 Sensitive lineage1.1.1.1 None
ERR3256198 MDR-TB lineage1.2.1.2.1 ph
ERR2199923 Sensitive lineage1.2.2.1 sz
ERR552407 Other lineage1.2.1.2.1 None
ERR895346 Other lineage1.1.3.2 None
DRR261092 Sensitive lineage1.1.1.1 None
SRR16058363 HR-TB lineage1.2.1.2 None
SRR16089675 Sensitive lineage1.2.1.2.1 None
ERR3256119 MDR-TB lineage1.2.1.2.1 ph
SRR29055970 HR-TB lineage1.2.1.2.1 None
SRR26112640 Sensitive lineage1.1.3.3 None
ERR9125857 Sensitive lineage1.1.2 None
SRR28409639 Sensitive lineage1.2.1.2.1 None
ERR3803816 Sensitive lineage1.1.1 None
SRR29666882 Sensitive lineage1.2.1.2 None
SRR29666882 Sensitive lineage1.2.1.2 None
SRR26112136 Sensitive lineage1.1.3.1 None
SRR6930930 Other lineage4.1.1.3 None
ERR9027253 Other lineage1.1.2 None
ERR552495 MDR-TB lineage1.2.2.2 sz
ERR3256112 MDR-TB lineage1.2.1.2.1 ph
SRR21714183 Sensitive lineage1.2.2.2 None
SRR7496506 Sensitive lineage1.2.1.2.1 us
DRR188905 Sensitive lineage1.2.1.2.1 None
ERR3256139 Sensitive lineage1.2.1.2.1 ph
DRR189027 HR-TB lineage1.2.1.2.1 None
ERR3132173 RR-TB lineage4.7 None
SRR8380940 Other lineage1.1.2 in
SRR21576600 RR-TB lineage1.2.1.2 None
SRR15014768 RR-TB lineage1.1.2 None
ERR7902655 Sensitive lineage1.1.2 None
ERR3256166 HR-TB lineage1.2.1.2.1 ph
SRR16115878 Sensitive lineage1.1.1 None
SRR28409403 Sensitive lineage1.2.1.2.1 None
SRR26112692 HR-TB lineage1.2.1.2.1 None
ERR3256125 Other lineage1.2.1.2.1 ph
DRR261068 Other lineage1.1.1 None
DRR261191 Sensitive lineage1.1.1.1 None
DRR261076 Sensitive lineage1.1.1.1 None
SRR10305946 Other lineage4.5 None
DRR188578 Other lineage1.2.1.2.1 None
SRR26112621 HR-TB lineage1.2.1.2.1 None
ERR3256232 Other lineage1.2.1.2.1 ph
DRR188679 Sensitive lineage1.1.1.1 None
ERR2200103 Sensitive lineage4.9 sz
SRR21864655 Sensitive lineage4 None
ERR3256135 MDR-TB lineage1.2.1.2 ph
SRR30296336 Sensitive lineage1.2.1.2.1 None
ERR11811439 Sensitive lineage1.2.2.2 None
ERR2199787 Sensitive lineage1.1.3.2 sz
SRR28170797 Sensitive lineage1.1.2 None
ERR13291847 Other lineage1.2.1.2.1 None
SRR16058362 Sensitive lineage1.2.1.2.1 None
ERR3256162 Other lineage1.2.1.2.1 ph
ERR9786010 Sensitive lineage1.1.1 None
SRR30296331 Sensitive lineage1.2.1.2 None
SRR30296331 Sensitive lineage1.2.1.2 None
DRR130125 MDR-TB lineage1.2.1.2.1 None
ERR4050136 Sensitive lineage1.1.1.1 None
SRR16370298 Other lineage1.1.1 None
SRR16370378 Sensitive lineage4.3.3 None
ERR13292434 Sensitive lineage1.1.1 None
SRR29052656 Sensitive lineage1.2.2.2 None
ERR13252367 Sensitive lineage1.2.1.2.1 None
ERR7902701 Sensitive lineage1.2.1.2.1 None
SRR16103908 Sensitive lineage1.2.1.2.1 None
ERR3256204 Sensitive lineage1.2.1.2.1 ph
DRR473998 HR-TB lineage1.2.1.2.1 None
SRR16058170 Sensitive lineage1.2.1.2.1 None
ERR2660491 Sensitive lineage1.2.2.1 None
ERR7902703 Sensitive lineage1.1.2 None
DRR261195 Sensitive lineage1.1.1.1 None
SRR2101757 MDR-TB lineage1.2.2.2 None
SRR21576717 MDR-TB lineage1.2.1.2 None
SRR26112472 Sensitive lineage1.2.2.2 None
SRR19315449 Sensitive lineage1.1.1 None
ERR13194030 HR-TB lineage1.1.1.1 None
DRR261113 HR-TB lineage1.1.1.1 None
DRR261177 Sensitive lineage1.1.1.1 None
DRR261084 Sensitive lineage1.1.1.1 None
DRR261196 Sensitive lineage1.1.1.1 None
SRR21747053 MDR-TB lineage1.2.1.2 None
ERR3256172 HR-TB lineage1.2.1.2.1 ph
SRR29056030 Sensitive lineage1.2.1.2.1 None
ERR9125491 RR-TB lineage1.2.1.2.1 None
DRR184905 Sensitive lineage1.1.1.1 vn
DRR185030 Sensitive lineage1.1.1.1 vn
ERR13291194 Sensitive lineage1.1.2;lineage1.1.3.1 None
ERR3256145 HR-TB lineage1.2.1.2 ph
SRR16370450 HR-TB lineage1.1.1 None
SRR19317524 Sensitive lineage1.2.1.2 None
ERR3256146 HR-TB lineage1.2.1.2.1 ph
ERR3803970 Sensitive lineage1.1.1 None
SRR16370608 Sensitive lineage1.2.1.2 None
DRR188845 Sensitive lineage1.2.1.2.1 None
SRR26112342 Sensitive lineage1.2.1.2.1 None
SRR16058693 HR-TB lineage1.2.2.2 None
SRR16370345 Sensitive lineage1.2.1.2.1 None
SRR19315444 Sensitive lineage1.2.2.2 None
SRR8380944 Sensitive lineage1.1.2 None
DRR261169 HR-TB lineage1.1.1.1 None
ERR3256118 Sensitive lineage1.2.1.2.1 ph
DRR261171 Sensitive lineage1.1.1.1 None
SRR17592373 Sensitive lineage4.9 None
ERR3256270 Pre-XDR-TB lineage1.2.1.2.1 ph
ERR13252808 HR-TB lineage1.2.1.2.1 None
SRR24799273 Sensitive lineage1.2.1.2.1 None
ERR13250187 MDR-TB lineage1.2.1.2.1 None
SRR16058654 Sensitive lineage1.2.1.2.1 None
DRR261184 Sensitive lineage1.1.1.1 None
ERR3256200 Sensitive lineage1.2.1.2.1 ph
SRR21576623 MDR-TB lineage1.2.2 None
ERR9786016 Sensitive lineage1.1.1 None
SRR18911870 Sensitive lineage1.2.1.2 None
DRR261159 MDR-TB lineage1.1.1.1 None
SRR21737224 Sensitive lineage1.2.1.2.1 None
ERR9125464 Sensitive lineage1.2.2.2 None
SRR29053257 Sensitive lineage1.1.3.1 None
ERR13254217 MDR-TB lineage1.2.1.2 None
ERR11811404 HR-TB lineage1.2.2.2 None
ERR11811404 HR-TB lineage1.2.2.2 None
SRR26112661 Sensitive lineage1.2.1.2.1 None
SRR16058178 Sensitive lineage1.2.1.2.1 None
SRR16058477 Sensitive lineage1.1.2 None
ERR3256176 Sensitive lineage1.2.1.2.1 ph
ERR3256268 Sensitive lineage1.2.1.2.1 ph
ERR3256168 RR-TB lineage1.2.1.2.1 ph
ERR3256170 Sensitive lineage1.2.1.2.1 ph
ERR7902726 Sensitive lineage1.2.2.2 None
SRR28782506 Sensitive lineage1.2.1.2.1 None
SRR29052846 MDR-TB lineage1.2.1.2.1 None
ERR2515114 HR-TB lineage4.4.1.1.1 za
DRR474150 Other lineage1.1.3 None
SRR21658752 Other lineage1.2.1.2.1 None
SRR26112321 Other lineage1.2.1.2.1 None
SRR26112667 Sensitive lineage1.1.3.1 None
ERR3256111 Sensitive lineage1.2.1.2.1 ph
SRR7496518 Sensitive lineage1.2.1.2.1 None
ERR9125566 Sensitive lineage1.2.2.2 None
ERR9901037 Sensitive lineage1.1.3.1 None
SRR29690801 Sensitive lineage1.1.1.1 None
ERR3256242 HR-TB lineage1.2.1.2.1 ph
SRR16089907 Sensitive lineage1.2.1.2.1 None
SRR16089637 Sensitive lineage1.1.1 None
SRR8380910 Other lineage1.1.2 in
ERR3256284 Sensitive lineage1.2.1.2.1 ph
ERR3256226 MDR-TB lineage1.2.1.2 ph
DRR474186 Sensitive lineage1.2.1.2.1 None
ERR9125531 Sensitive lineage1.2.1.2.1 None
ERR7902653 Sensitive lineage1.1.2 None
ERR7902692 Sensitive lineage1.2.1.2.1 None
ERR9125454 MDR-TB lineage1.2.1.2.1 None
ERR9125517 Sensitive lineage1.2.1.2.1 None
ERR3132237 Sensitive lineage1.1.3 None
DRR261072 Sensitive lineage1.1.1.1 None
DRR261070 Sensitive lineage1.1.1.1 None
ERR13291624 HR-TB lineage1.1.2 None
ERR7902715 Sensitive lineage1.2.1.2 None
SRR24799266 Sensitive lineage1.2.1.2.1 None
ERR2515557 Sensitive lineage1.2.2.1 za
ERR3256121 Sensitive lineage1.2.1.2.1 ph
SRR29051203 Sensitive lineage1.2.1.2.1 None
ERR550994 Sensitive lineage1.1.1 None
SRR26112297 Other lineage1.2.1.2.1 None
DRR188970 Sensitive lineage1.2.1.2.1 None
ERR13258707 MDR-TB lineage1.1.3.1 None
ERR3256155 HR-TB lineage1.2.1.2.1 ph
ERR3256192 MDR-TB lineage1.2.1.2.1 ph
DRR261082 HR-TB lineage1.1.1.1 None
DRR189046 Sensitive lineage1.2.2.2 None
DRR261097 Sensitive lineage1.1.1.1 None
SRR21576687 MDR-TB lineage1.2.1.2 None
SRR21576734 MDR-TB lineage1.2.1.2 None
DRR261157 MDR-TB lineage1.1.1.1 None
DRR261112 Sensitive lineage1.1.1.1 None
SRR22424945 Other lineage1.1.2 None
ERR9125880 Sensitive lineage1.1.3.1 None
DRR188695 Sensitive lineage1.2.1.2.1 None
ERR3256260 Sensitive lineage1.2.1.2.1 ph
SRR21576653 RR-TB lineage1.2.1.2 None
ERR3256224 Sensitive lineage1.2.1.2.1 ph
ERR3256266 HR-TB lineage1.2.1.2.1 ph
SRR21685242 Sensitive lineage1.1.3.1 None
SRR21746999 HR-TB lineage4.5 None
SRR16058475 Sensitive lineage1.2.1.2.1 None
SRR26112679 Sensitive lineage1.2.2.2 None
ERR7821158 Sensitive lineage1.1.3.2 None
DRR261100 Sensitive lineage1.1.1.1 None
ERR4195318 Sensitive lineage1.1.2 None
SRR28357659 Sensitive lineage1.2.1.2 None
SRR26112121 Sensitive lineage1.1.2 None
ERR13252567 Sensitive lineage1.2.1.2.1 None
SRR30340075 Other lineage1.1.2 None
SRR24799239 Sensitive lineage1.1.3.3 None
ERR3256235 MDR-TB lineage1.2.1.2.1 ph
ERR9125624 Other lineage1.1.2 None
ERR9125668 Sensitive lineage1.2.1.2.1 None
ERR3256272 HR-TB lineage1.2.1.2.1 ph
ERR3256206 HR-TB lineage1.2.1.2.1 ph
ERR3256261 Sensitive lineage1.2.1.2.1 ph
SRR21747075 MDR-TB lineage1.2.1.2 None
SRR26112130 Other lineage2.2.1 None
DRR261018 HR-TB lineage1.1.1.1 None
SRR21727767 Sensitive lineage1.2.1.2.1 None
SRR6930913 MDR-TB lineage1.2.2.2 None
SRR16058159 Sensitive lineage1.2.2.2 None
SRR16058256 Sensitive lineage1.1.2 None
ERR3256143 MDR-TB lineage1.2.1.2.1 ph
SRR10321146 Sensitive lineage1.1.2 None
ERR3256233 HR-TB lineage1.2.1.2.1 ph
SRR21710728 HR-TB lineage1.2.1.2.1 None
SRR19158661 Other lineage1.2.1.2.1 None
SAMEA2534536 Sensitive lineage1.1.1.1 None
SRR21685353 Sensitive lineage1.2.2.2 None
SRR26112169 Sensitive lineage1.1.3.3 None
ERR13291445 Sensitive lineage1.2.1.2.1 None
SRR16370596 Sensitive lineage1.2.2.2 None
ERR13291654 Sensitive lineage1.2.1.2.1 None
ERR2199950 Sensitive lineage1.2.2.1 sz
SRR21864656 Sensitive lineage4 None
SRR21686598 Sensitive lineage4 None
ERR3256169 HR-TB lineage1.2.1.2.1 ph
SRR28170818 Sensitive lineage1.2.2.2 None
SRR21722242 Sensitive lineage1.2.2.2 None
ERR3256163 HR-TB lineage1.2.1.2.1 ph
DRR130147 RR-TB lineage2.2.1 None
SRR19267900 HR-TB lineage1.1.3.1 None
ERR9125306 MDR-TB lineage1.2.1.2.1 None
SRR26112276 Other lineage1.2.1.2.1 None
ERR2515443 Sensitive lineage4.4.1.1.1 za
ERR3256184 Sensitive lineage1.2.1.2.1 ph
ERR9125373 HR-TB lineage1.2.1.2.1 None
SRR29052669 Sensitive lineage1.2.1.2.1 None
ERR9657193 Sensitive lineage1.1.2 None
ERR3324375 Other lineage1.1.3.2 None
SRR26112710 Sensitive lineage1.2.1.2 None
DRR261019 HR-TB lineage1.1.1.1 None
ERR13291979 Other lineage1.1.3.1 None
ERR552276 Sensitive lineage1.1.1.1 None
ERR3324342 Other lineage1.1.2 None
SRR21747029 MDR-TB lineage1.2.2.2 None
ERR3256257 HR-TB lineage1.2.1.2.1 ph
SRR7496496 Sensitive lineage1.2.1.2 us
DRR261151 HR-TB lineage1.1.1.1;lineage4.1 None
ERR13291868 Sensitive lineage1.1.2 None
SRR21576603 MDR-TB lineage1.2.1.2 None
ERR13291290 Sensitive lineage1.1.1 None
ERR13291290 Sensitive lineage1.1.1 None
ERR9657195 Sensitive lineage1.2.1.2 None
SRR26112518 Sensitive lineage1.2.1.2.1 None
SRR29053590 Sensitive lineage1.1.3.1 None
SAMEA2535315 Other lineage1.1.3.2 None
ERR3256225 Other lineage1.2.1.2 ph
ERR13260096 Pre-XDR-TB lineage1.2.2.2 None
ERR13291395 Sensitive lineage1.1.3.1 None
SRR26125032 Other lineage1.1.2 None
ERR7902628 Sensitive lineage1.1.2 None
SRR16370412 MDR-TB lineage1.2.1.2.1 None
ERR3256160 HR-TB lineage1.2.1.2.1 ph
ERR9125909 Other lineage2.2.1 None
ERR2199956 Other lineage1.2.2.1 sz
ERR7362041 MDR-TB lineage1.2.2.2 None
ERR13291234 HR-TB lineage1.1.3.1 None
ERR11043553 Other lineage4.5 None
SRR19428582 Sensitive lineage1.1.2 None
SRR22424740 MDR-TB lineage1.1.2 None
ERR3132084 MDR-TB lineage1.1.2 None
SRR7496550 Sensitive lineage1.2.1.2.1 us
SRR21576720 MDR-TB lineage1.2.1.2 None
DRR261120 Sensitive lineage1.1.1.1 None
ERR9786007 Sensitive lineage1.1.1 None
SRR21677632 Sensitive lineage1.2.1.2.1 None
DRR188689 MDR-TB lineage1.2.1.2.1 None
DRR188989 HR-TB lineage1.2.1.2.1 None
DRR261181 Sensitive lineage1.1.1.1 None
SRR30180310 MDR-TB lineage1.2.1.2.1 None
SRR30180310 MDR-TB lineage1.2.1.2.1 None
ERR13292322 Sensitive lineage1.2.1.2.1 None
SRR28409411 HR-TB lineage1.2.1.2.1 None
SRR28782505 HR-TB lineage1.1.1.1 None
ERR13252747 HR-TB lineage1.2.1.2.1 None
ERR11811397 Sensitive lineage1.2.2.2 None
ERR11811398 Sensitive lineage1.1.3.2 None
ERR11811415 Other lineage1.1.3.2 None
ERR11811415 Other lineage1.1.3.2 None
ERR11811434 Sensitive lineage1.2.2.2 None
ERR11811434 Sensitive lineage1.2.2.2 None
ERR11811442 Sensitive lineage1.2.2.1 None
ERR11811449 Sensitive lineage1.1.3.2 None
ERR13291383 Sensitive lineage1.2.1.2.1 None
ERR13291465 Sensitive lineage1.2.1.2.1 None
ERR13291484 Sensitive lineage1.2.1.2.1 None
SRR30146987 Sensitive lineage1.2.2.2 None
SRR29893826 Sensitive lineage1.1.3.2 None
ERR13291198 Sensitive lineage1.2.2.2 None
ERR13291198 Sensitive lineage1.2.2.2 None
ERR3256211 HR-TB lineage1.2.1.2.1 ph
ERR9786015 Sensitive lineage1.1.1 None
ERR3256273 HR-TB lineage1.2.1.2 ph
ERR7902654 Other lineage1.2.1.1 None
ERR7902719 Sensitive lineage1.1.2 None
SRR19324971 Sensitive lineage1.2.1.2.1 None
DRR184599 Sensitive lineage1.1.1.1 vn
DRR184992 Sensitive lineage1.1.1.1 vn
DRR188818 Sensitive lineage1.2.1.2 None
SRR16058177 Sensitive lineage1.2.1.2.1 None
SRR16058241 Other lineage2.2.1 None
DRR261093 Sensitive lineage1.1.1.1 None
ERR2515163 Pre-XDR-TB lineage1.2.2.2 za
ERR3256240 Other lineage1.2.1.2 ph
SRR26112044 Sensitive lineage1.2.1.2.1 None
SRR26112514 Sensitive lineage1.2.2.2 None
DRR188918 Sensitive lineage1.2.1.2.1 None
SRR8380889 RR-TB lineage1.1.2 in
SRR21576652 RR-TB lineage1.2.1.2 None
ERR13292343 Sensitive lineage1.2.1.2 None
SRR18914031 Sensitive lineage1.1.2 None
ERR3256167 Sensitive lineage1.2.1.2.1 ph
SRR16058184 Sensitive lineage1.2.1.2.1 None
SRR6855955 Sensitive lineage1.2.2.1 None
SRR16058451 Sensitive lineage1.1.3.1 None
SRR26112140 Sensitive lineage1.2.1.2.1 None
SRR21576583 Pre-XDR-TB lineage1.2.1.2 None
DRR261063 Other lineage1.1.1.1 None
SRR6930914 MDR-TB lineage1.2.2.2 None
SRR26112793 Sensitive lineage1.2.1.2 None
DRR188491 Sensitive lineage1.2.1.2 None
SRR18897175 Other lineage1.1.1.1 None
ERR3256179 HR-TB lineage1.2.1.2.1 ph
ERR3256210 MDR-TB lineage1.2.1.2.1 ph
ERR3256248 Sensitive lineage1.2.1.2.1 ph
ERR3256282 HR-TB lineage1.2.1.2.1 ph
ERR3324334 MDR-TB lineage1.1.2 None
ERR3256180 Sensitive lineage1.2.1.2.1 ph
SRR16089540 Sensitive lineage1.2.2.2 None
ERR2515252 MDR-TB lineage1.2.2.2 za
ERR13291433 Sensitive lineage1.2.1.2.1 None
ERR13291279 Sensitive lineage1.1.1.1 None
SRR16370233 Sensitive lineage1.2.1.2 None
ERR7902721 Other lineage1.1.1.1 None
SRR21657216 Sensitive lineage1.1.3.1 None
ERR7902690 Sensitive lineage1.2.2.2 None
ERR3256156 Other lineage1.2.1.2.1 ph
SRR21576692 MDR-TB lineage1.2.1.2.1 None
SRR16058724 MDR-TB lineage1.2.1.2.1 None
ERR7902678 HR-TB lineage1.1.1 None
ERR3256113 HR-TB lineage1.2.1.2 ph
ERR3256120 Sensitive lineage1.2.1.2.1 ph
ERR3256152 HR-TB lineage1.2.1.2.1 ph
ERR3256205 Sensitive lineage1.2.1.2.1 ph
ERR3256249 HR-TB lineage1.2.1.2.1 ph
ERR3256286 Sensitive lineage1.2.1.2.1 ph
ERR2660522 Sensitive lineage1.2.2.1 None
ERR2199969 Sensitive lineage1.2.2.1 sz
SRR16370296 Other lineage1.1.1 None
ERR13291338 Sensitive lineage1.1.3.1 None
SRR6855975 Sensitive lineage4.4.1.1.1 None
ERR7902714 Sensitive lineage1.2.1.2.1 None
ERR7902740 HR-TB lineage1.1.1.1 None
ERR3256275 Sensitive lineage1.2.1.2.1 ph
ERR550626 Other lineage1.1.1 None
SRR21726712 Other lineage1.2.1.2.1 None
SRR16058476 Sensitive lineage1.2.1.2.1 None
SRR28409309 Other lineage4.1.2.1 None
SRR16099306 Sensitive lineage1.2.2.2 None
SRR28409524 HR-TB lineage1.2.2.2 None
SRR28409294 HR-TB lineage1.2.1.2.1 None
SRR26112268 Sensitive lineage1.2.2.2 None
SRR26112355 Sensitive lineage1.1.3.1 None
ERR13291706 Sensitive lineage1.1.1.1 None
DRR184966 Sensitive lineage1.1.1.1 vn
ERR2851366 Sensitive lineage1.2.1.2.1 lb
ERR3256190 Other lineage1.2.1.2.1 ph
ERR3256150 Other lineage1.2.1.2.1 ph
ERR13252933 HR-TB lineage4.9 None
SRR28409523 Other lineage1.2.1.2.1 None
SRR28409710 Other lineage1.1.3.1 None
ERR11811395 Sensitive lineage1.1.3.2 None
ERR11811407 Sensitive lineage1.1.3.2 None
ERR11811407 Sensitive lineage1.1.3.2 None
ERR11811409 Sensitive lineage1.2.2.1 None
ERR11811409 Sensitive lineage1.2.2.1 None
ERR11811437 Sensitive lineage1.1.3.2 None
ERR11811437 Sensitive lineage1.1.3.2 None
ERR11811451 Sensitive lineage1.2.2.1 None
ERR11811451 Sensitive lineage1.2.2.1 None
ERR13291355 Sensitive lineage1.2.1.2.1 None
ERR13291355 Sensitive lineage1.2.1.2.1 None
SRR29356787 Sensitive lineage1.2.1.2.1 None
SRR29666879 Sensitive lineage4.1.1 None
SRR29666879 Sensitive lineage4.1.1 None
SRR29464855 Other lineage1.1.1.1 None
SRR29464855 Other lineage1.1.1.1 None
SRR28858762 Sensitive lineage1.1.2 None
SRR30146984 HR-TB lineage1.2.1.2.1 None
SRR29906778 Sensitive lineage1.1.3.3 None
SRR29906795 Sensitive lineage1.2.1.2 None
ERR13582773 Sensitive lineage1.2.2.1;lineage4.9 None
ERR3256185 Sensitive lineage1.2.1.2.1 ph
ERR7902699 Sensitive lineage1.1.2 None
SRR16058627 Sensitive lineage1.2.1.2.1 None
SRR28409354 Sensitive lineage1.1.2 None
SRR28409686 Sensitive lineage4 None
DRR130148 MDR-TB lineage1.2.1.2.1 None
ERR3256219 MDR-TB lineage1.2.1.2.1 ph
ERR3256280 MDR-TB lineage1.2.1.2.1 ph
ERR10748525 Pre-XDR-TB lineage1.2.2.2 None
SRR1792171 Other La1.7.1 None
SRR29052702 Sensitive lineage1.2.1.2 None
ERR9125710 Sensitive lineage1.2.1.2.1 None
ERR9125717 Sensitive lineage1.2.1.2.1 None
ERR3256157 Sensitive lineage1.2.1.2.1 ph
SRR16370267 Other lineage1.1.3.1 None
SRR19325545 Sensitive lineage1.2.1.2.1 None
SRR16103911 Sensitive lineage1.2.1.2 None
ERR9657186 Other lineage1.2.2.1 None
ERR7902697 MDR-TB lineage1.1.1 None
ERR3256277 Sensitive lineage1.2.1.2.1 ph
SRR21686607 Sensitive lineage1.2.1.2.1 None
ERR7902627 Sensitive lineage1.1.2 None
ERR2516077 MDR-TB lineage1.2.2.1 za
SRR16058679 MDR-TB lineage1.2.1.2 None
SRR21710729 Sensitive lineage1.2.1.2 None
DRR261102 Sensitive lineage1.1.1.1 None
DRR261176 Sensitive lineage1.1.1.1 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR16058656 RR-TB lineage1.2.1.2.1 None
DRR261114 Other lineage1.1.1.1 None
DRR261039 Sensitive lineage1.1.1.1 None
SRR28409435 Other lineage1.2.1.2.1 None
SRR16058454 Sensitive lineage1.1.2 None
ERR3803988 Sensitive lineage1.1.1 None
SRR29356706 Sensitive lineage1.2.1.2.1 None
SRR30180231 MDR-TB lineage1.2.1.2 None
SRR30180231 MDR-TB lineage1.2.1.2 None
ERR9786028 Sensitive lineage1.1.3.1 None
SRR24799258 Other lineage1.2.2.2 None
SRR15014749 MDR-TB lineage1.1.2 None
SRR16089837 Sensitive lineage1.1.1.1 None
SRR26112263 Sensitive lineage2.1 None
SRR26112637 Sensitive lineage1.2.1.2.1 None
SRR2101641 RR-TB lineage4.9 None
ERR2200115 Sensitive lineage1.2.2.2 sz
ERR9125705 Sensitive lineage1.2.1.2.1 None
ERR9125472 HR-TB lineage1.2.1.2.1 None
DRR261194 Sensitive lineage1.1.1.1 None
SRR26112333 Sensitive lineage1.2.1.2.1 None
SRR6930927 MDR-TB lineage1.2.1.2 None
ERR3256175 HR-TB lineage1.2.1.2.1 ph
ERR3256264 MDR-TB lineage1.2.1.2.1 ph
SRR29053032 Sensitive lineage1.2.1.2.1 None
SRR16058687 Sensitive lineage1.2.2.2 None
ERR7902671 Sensitive lineage1.1.3.2 None
ERR553146 Sensitive lineage1.2.2.2 None
ERR3256269 Sensitive lineage1.2.1.2.1 ph
ERR9125494 Other lineage1.1.2 None
DRR261021 Sensitive lineage1.1.1.1 None
SRR18913755 Other lineage1.1.2 None
SRR16089899 Sensitive lineage1.2.1.2.1 None
SRR28409440 Sensitive lineage1.2.1.2.1 None
SRR28409567 Sensitive lineage1.2.1.2.1 None
SRR28409415 Sensitive lineage1.2.1.2.1 None
SRR18912992 Sensitive lineage1.1.1 None
SRR28409693 Sensitive lineage1.1.1.1 None
SRR25473322 Other None
SRR28409322 Other lineage1.1.2 None
ERR13291516 Sensitive lineage1.2.1.2.1 None
SRR28409616 Sensitive lineage1.2.1.2.1 None
SRR28782504 Sensitive lineage1.1.1.1 None
SRR6982247 MDR-TB lineage1.2.2.2 None
SRR26112262 HR-TB lineage1.2.1.2.1 None
ERR11811399 HR-TB lineage1.1.3.2 None
ERR11811399 HR-TB lineage1.1.3.2 None
ERR11811400 Sensitive lineage1.2.2.1 None
ERR11811400 Sensitive lineage1.2.2.1 None
ERR11811440 Sensitive lineage1.1.3.2 None
ERR11811452 Sensitive lineage1.1.3.2 None
ERR11811452 Sensitive lineage1.1.3.2 None
ERR13291505 Sensitive lineage1.2.1.2.1 None
ERR13291505 Sensitive lineage1.2.1.2.1 None
SRR29690807 Sensitive lineage1.2.1.2.1 None
ERR9125493 Sensitive lineage1.2.1.2.1 None
SRR30180438 MDR-TB lineage1.2.1.2 None
ERR9125896 Sensitive lineage1.1.2 None
SRR19324981 Sensitive lineage1.2.2.2 None
SRR7496534 Sensitive lineage1.2.1.2.1 us
DRR261027 Sensitive lineage1.1.1.1 None
DRR261127 Sensitive lineage1.1.1.1 None
DRR261197 Sensitive lineage1.1.1.1 None
SRR26112742 Sensitive lineage1.2.1.2.1 None
SRR16058288 MDR-TB lineage1.2.1.2.1 None
SRR21658537 Sensitive lineage1.2.1.2.1 None
SRR21722232 Sensitive lineage1.2.1.2.1 None
SRR21727723 Sensitive lineage1.2.1.2.1 None
SRR21728181 HR-TB lineage1.2.1.2.1 None
SRR22424841 Sensitive lineage1.1.2 None
SRR26112638 Sensitive lineage1.2.1.2.1 None
DRR261037 Other lineage1.1.1.1 None
DRR261088 Sensitive lineage1.1.1.1 None
DRR261099 Sensitive lineage1.1.1.1 None
SRR24827292 Sensitive lineage1.2.2.2 None
ERR13291256 HR-TB lineage1.2.1.2.1 None
SRR30340069 Sensitive lineage1.2.1.2.1 None
SRR16058653 Other lineage1.1.2 None
SRR16370657 Sensitive lineage1.2.1.2.1 None
SRR16058270 Sensitive lineage1.2.1.2.1 None
SRR16100732 Other lineage1.2.1.2.1 None
SRR16370273 Other lineage1.2.1.2.1 None
SRR18911452 Sensitive lineage1.2.2.2 None
DRR261170 Sensitive lineage1.1.1.1 None
SRR2101763 MDR-TB lineage1.2.2.2 None
SRR26112335 Sensitive lineage1.2.1.2.1 None
SRR24799261 Sensitive lineage1.2.1.2 None
DRR474092 Sensitive lineage1.2.1.2.1 None
SRR15014722 MDR-TB lineage1.1.2 None
SRR26112261 Sensitive lineage1.2.1.2.1 None
SRR29052638 Other lineage1.1.1 None
ERR13246475 Sensitive lineage1.1.1.1 None
SRR28170734 Sensitive lineage1.2.1.2.1 None
SRR19221474 Sensitive lineage1.1.3.1 None
SRR19224247 Sensitive lineage1.2.1.2 None
ERR13246327 Other lineage1.2.1.2.1 None
SRR21659823 Sensitive lineage1.1.3.1 None
SRR6982277 RR-TB lineage4.9 None
SRR16058677 HR-TB lineage1.2.1.2.1 None
ERR3132117 MDR-TB lineage1.2.2.2 None
SRR7496547 Sensitive lineage1.2.1.2.1 us
ERR9125459 HR-TB lineage1.2.2.2 None
SRR3136699 Sensitive lineage1.2.1.2.1 None
SRR6982047 Sensitive lineage4.9 None
ERR3256122 HR-TB lineage1.2.1.2.1 ph
SRR29055367 Sensitive None
SRR8380909 HR-TB lineage1.1.2 in
ERR13252596 Sensitive lineage1.2.1.2.1 None
ERR3256174 HR-TB lineage1.2.1.2.1 ph
ERR13258709 Sensitive lineage4.5 None
DRR188912 Sensitive lineage1.2.1.2.1 None
ERR13291416 Sensitive lineage1.2.1.2.1 None
ERR13252822 Sensitive lineage1.2.2.2 None
SRR21576677 MDR-TB lineage1.2.1.2 None
SRR4423160 Pre-XDR-TB lineage1.1.2 None
SRR30180283 MDR-TB lineage1.2.1.2 None
SRR30180283 MDR-TB lineage1.2.1.2 None
SRR30180479 MDR-TB lineage1.2.1.2 None
SRR30180479 MDR-TB lineage1.2.1.2 None
ERR9125883 Sensitive lineage1.2.1.2.1 None
SRR12882771 Sensitive lineage1.2.1.2.1 None
SRR19267908 Sensitive lineage1.2.1.2.1 None
SRR7496480 Sensitive lineage1.2.1.2.1 us
SRR7496530 HR-TB lineage1.2.1.2.1 us
SRR7496552 HR-TB lineage1.2.1.2.1 us
ERR2199949 Sensitive lineage1.2.2.1 sz
ERR2660476 Sensitive lineage1.1.3.2 None
ERR3256279 MDR-TB lineage1.2.1.2.1 ph
SRR19325523 Sensitive lineage1.2.1.2.1 None
SRR7496510 Sensitive lineage1.2.1.2.1 us
SRR29098622 Other lineage1.2.1.2.1 None
ERR13252542 Sensitive lineage1.2.1.2.1 None
DRR261179 Sensitive lineage1.1.1.1 None
DRR261025 Sensitive lineage1.1.1.1 None
ERR3132154 Sensitive lineage1.2.1.2.1 None
ERR13260046 MDR-TB lineage1.2.1.2 None
SRR16058576 Sensitive lineage1.2.1.2.1 None
SRR19406463 Sensitive lineage1.1.2 None
ERR3256188 HR-TB lineage1.2.1.2.1 ph
ERR3256222 HR-TB lineage1.2.1.2.1 ph
ERR3256258 MDR-TB lineage1.2.1.2.1 ph
SRR26112483 Sensitive lineage1.1.3.3 None
DRR261071 Other lineage1.1.1.1 None
DRR261187 Sensitive lineage1.1.1 None
SRR24827281 Pre-XDR-TB lineage1.2.1.2.1 None
SRR28409429 Sensitive lineage1.2.1.2.1 None
SRR28409581 Sensitive lineage1.1.1.1 None
SRR29831041 Sensitive lineage1.2.1.2.1 None
SRR28409460 Other lineage1.2.2.2 None
ERR7902737 Sensitive lineage1.2.1.2.1 None
ERR3256183 Sensitive lineage1.2.1.2.1 ph
SRR30340065 Sensitive lineage1.2.1.2 None
DRR130131 MDR-TB lineage1.2.1.2.1 None
SRR21576559 MDR-TB lineage1.2.1.2 None
ERR13291700 Sensitive lineage1.2.2.2 None
ERR3256278 MDR-TB lineage1.2.1.2.1 ph
ERR3256159 HR-TB lineage1.2.1.2.1 ph
ERR9657194 Other lineage1.1.2 None
ERR13291823 Sensitive lineage1.2.1.2.1 None
DRR261123 Sensitive lineage1.1.1 None
ERR3148214 Sensitive lineage1.2.1.2.1 mx
SRR16058458 Sensitive lineage1.2.1.2.1 None
SRR21728165 Other lineage1.1.3.1 None
ERR13291252 Sensitive lineage1.2.1.2.1 None
ERR11811435 Sensitive lineage1.2.2.2 None
ERR11811435 Sensitive lineage1.2.2.2 None
SRR22424874 Sensitive lineage1.1.2 None
SRR26112181 Sensitive lineage1.1.3.1 None
SRR26112317 Sensitive lineage1.1.2 None
ERR3256114 MDR-TB lineage1.2.1.2.1 ph
ERR3256144 MDR-TB lineage1.2.1.2.1 ph
ERR3256186 MDR-TB lineage1.2.1.2 ph
ERR3256209 Sensitive lineage1.2.1.2 ph
ERR3256228 Sensitive lineage1.2.1.2.1 ph
ERR9125877 Sensitive lineage1.1.2 None
SRR28409631 Sensitive lineage1.1.2 None
SRR26112533 Other lineage1.1.2 None
DRR261079 Sensitive lineage1.1.1.1 None
DRR261183 Sensitive lineage1.1.1.1 None
ERR3806826 Sensitive lineage1.1.3.1 None
DRR130216 MDR-TB lineage1.2.1.2.1 None
ERR3256281 MDR-TB lineage1.2.1.2.1 ph
ERR2515348 MDR-TB lineage1.2.2.2 za
ERR9125667 HR-TB lineage1.2.1.2 None
ERR9125711 Sensitive lineage1.2.1.2.1 None
ERR9657185 Sensitive lineage1.2.1.2.1 None
ERR11811410 Sensitive lineage1.1.3.2 None
ERR11811410 Sensitive lineage1.1.3.2 None
ERR3256285 Sensitive lineage1.2.1.2.1 ph
DRR188849 Sensitive lineage1.2.1.2.1 None
SRR26112149 Other lineage1.2.1.2.1 None
SRR16058448 Other lineage1.1.2 None
ERR3324333 Sensitive lineage1.1.1 None
ERR13292125 Sensitive lineage1.2.1.2.1 None
DRR261086 Sensitive lineage1.1.1.1 None
DRR261086 Sensitive lineage1.1.1.1 None
DRR261094 Other lineage1.1.1.1 None
ERR3256207 MDR-TB lineage1.2.1.2.1 ph
ERR2199945 Sensitive lineage1.2.2.1 sz
ERR3256173 Sensitive lineage1.2.1.2.1 ph
SRR29053055 Sensitive lineage1.2.1.2 None
SRR21576562 MDR-TB lineage1.2.1.2 None
SRR21685098 Sensitive lineage1.1.1.1 None
SRR7236387 Other La1.7.1 None
SRR21659817 Sensitive lineage1.2.2.2 None
SRR21685333 Sensitive lineage1.2.1.2.1 None
SRR21727763 Sensitive lineage1.1.3.1 None
SRR22424730 MDR-TB lineage1.2.2.2 None
ERR13292089 Sensitive lineage1.2.1.2 None
DRR261029 Sensitive lineage1.1.1.1 None
DRR261026 Sensitive lineage1.1.1.1 None
DRR261080 Other lineage1.1.1 None
ERR9125874 Sensitive lineage1.2.1.2.1 None
SRR28409727 Sensitive lineage1.2.1.2.1 None
DRR474178 Sensitive lineage1.2.1.2.1 None
SRR21676409 HR-TB lineage1.2.1.2.1 None
SRR21747006 MDR-TB lineage1.2.1.2 None
SRR8380931 Sensitive lineage1.1.2 in
SRR16370245 Sensitive lineage1.2.2.2 None
ERR13291537 Sensitive lineage1.1.3.1 None
ERR9125878 Sensitive lineage1.1.2 None
ERR2515798 MDR-TB lineage1.2.2.2 za
ERR3132157 MDR-TB lineage1.2.1.2.1;lineage4.1.2 None
ERR3256165 HR-TB lineage1.2.1.2.1 ph
DRR474025 Sensitive lineage1.2.1.2.1 None
SRR28858461 Sensitive lineage4.1.1.3 None
SRR26112498 Sensitive lineage1.2.1.2.1 None
SRR29881205 Sensitive lineage1.2.1.2.1 None
SRR29881205 Sensitive lineage1.2.1.2.1 None
SRR29831047 Sensitive lineage1.1.1.1 None
SRR29831047 Sensitive lineage1.1.1.1 None
SRR29893825 Sensitive lineage1.1.1.1 None
SRR29893825 Sensitive lineage1.1.1.1 None
ERR9121250 Sensitive lineage1.1.2 None
SRR16115080 HR-TB lineage1.2.1.2 None
SRR27705901 Sensitive lineage4.9 None
SRR6982155 MDR-TB lineage1.2.2.2 None
ERR7902704 Sensitive lineage1.2.2.2 None
SRR6982333 Sensitive lineage1.2.2.1 None
ERR10748182 MDR-TB lineage1.2.2.1 None
SRR18914033 Sensitive lineage1.2.1.2 None
ERR11811476 Sensitive lineage1.2.2.2 None
ERR11811476 Sensitive lineage1.2.2.2 None
SRR3142001 Sensitive lineage1.2.1.2.1 None
ERR13291421 Sensitive lineage1.1.1.1 None
ERR13291421 Sensitive lineage1.1.1.1 None
SRR18911911 Sensitive lineage1.2.2.2 None
ERR3256230 Other lineage1.2.1.2.1 ph
SRR21685365 Sensitive lineage1.1.3.1 None
ERR3256251 HR-TB lineage1.2.1.2 ph
SRR18914174 Sensitive lineage1.2.1.2.1 None
SRR28170823 Sensitive lineage1.1.2 None
DRR188834 Sensitive lineage1.2.1.2 None
ERR3256178 MDR-TB lineage1.2.1.2 ph
SRR29052914 Sensitive lineage1.2.1.2 None
ERR3256182 MDR-TB lineage1.2.1.2.1 ph
ERR3256187 Other lineage1.2.1.2.1 ph
SRR18911875 HR-TB lineage1.2.1.2 None
ERR553087 Sensitive lineage4.7 cg
SRR18911135 Sensitive lineage1.1.3.3 None
DRR189053 Sensitive lineage1.2.1.2.1 None
ERR3256158 Sensitive lineage1.2.1.2.1 ph
ERR1465885 Sensitive lineage4.7 None
SRR29052972 Sensitive lineage4.3.3 None
SRR1792118 Other La1.7.1 None
ERR9657184 Sensitive lineage1.1.3.3 None