Rv2680 - c.334_336delTCGinsCC
Drug resistance types
0 Sensitive
2 RR-TB
13 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 2 |
| lineage4.9 | 5 |
| La1.2.BCG | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 23 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6046485 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
|---|
