lineage | Count |
---|---|
lineage4.1.4 | 1 |
lineage2.2.1 | 14 |
lineage2.2.1.1 | 4 |
lineage4.3.3 | 3 |
lineage3 | 3 |
lineage2.2.2 | 7 |
lineage4.3.2.1 | 5 |
lineage4.8 | 1 |
lineage4.2.1 | 4 |
lineage4.2.2 | 2 |
lineage4.9 | 2 |
lineage1.2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None |
SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10828179 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR25207078 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7645858 | Pre-XDR-TB | lineage4.3.3 | None |
SRR8380942 | HR-TB | lineage3 | in |
ERR10112857 | XDR-TB | lineage2.2.2 | None |
ERR4011122 | Pre-XDR-TB | lineage2.2.2 | None |
ERR8699168 | Sensitive | lineage4.3.2.1 | None |
SRR7755665 | Pre-XDR-TB | lineage4.3.3 | None |
ERR8025476 | Pre-XDR-TB | lineage2.2.2 | None |
ERR8699833 | Sensitive | lineage4.3.2.1 | None |
ERR4797457 | XDR-TB | lineage4.8 | in |
SRR3743484 | Pre-XDR-TB | lineage4.2.1 | None |
SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th |
ERR8686197 | Sensitive | lineage4.3.2.1 | None |
ERR13291154 | HR-TB | lineage4.2.2 | None |
ERR8699154 | Sensitive | lineage4.3.2.1 | None |
ERR8686195 | Sensitive | lineage4.3.2.1 | None |
ERR13291069 | HR-TB | lineage4.2.2 | None |
ERR13252191 | MDR-TB | lineage4.9 | None |
SRR1048966 | MDR-TB | lineage2.2.1 | None |
SRR25827852 | XDR-TB | lineage3 | None |
SRR6152753 | HR-TB | lineage2.2.1 | ca |
SRR29093889 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4796440 | Pre-XDR-TB | lineage2.2.1 | in |
ERR10762446 | Pre-XDR-TB | lineage4.2.1 | None |
ERR9992938 | XDR-TB | lineage2.2.2 | None |
SRR10341350 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4796925 | Pre-XDR-TB | lineage2.2.1 | in |
ERR13285712 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29093121 | MDR-TB | lineage2.2.1 | None |
SRR26056465 | HR-TB | lineage3 | None |
ERR4811281 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR671726 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR29017428 | MDR-TB | lineage1.2.2.2 | None |
ERR11798720 | XDR-TB | lineage4.2.1 | None |
SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5266534 | Pre-XDR-TB | lineage2.2.1 | ru |
ERR4553496 | MDR-TB | lineage1.2.2.2 | None |
ERR13289326 | Pre-XDR-TB | lineage2.2.2 | None |
SRR5709892 | Pre-XDR-TB | lineage2.2.1.1 | th |
ERR4796405 | Pre-XDR-TB | lineage2.2.1 | in |
ERR14708079 | Pre-XDR-TB | lineage4.9 | None |
ERR8025623 | Pre-XDR-TB | lineage2.2.2 | None |
SRR7755756 | Pre-XDR-TB | lineage4.3.3 | None |
SRR2024966 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR2024997 | MDR-TB | lineage2.2.1 | cn |