lineage | Count |
---|---|
La1.8.1 | 7 |
lineage4.3.3 | 2 |
La1.7.1 | 4 |
lineage4.8.2 | 1 |
lineage3.1.1 | 3 |
lineage1.2.2.2 | 1 |
lineage2.2.1 | 4 |
lineage1.1.3.1 | 1 |
4 | |
lineage3 | 7 |
lineage4.6.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.8 | 4 |
lineage1.1.2 | 2 |
lineage4;lineage2.2.1 | 1 |
lineage4.6.1 | 1 |
lineage4.7 | 1 |
lineage4.9;lineage2.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1 | 3 |
lineage4.6.1.2 | 1 |
lineage3.1.2 | 2 |
lineage4.4.1.1 | 2 |
lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
lineage4.1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | SRR1792124 | Other | La1.8.1 | None | ERR9286032 | Other | lineage4.3.3 | None | SRR1791764 | Other | La1.8.1 | None | SRR1792089 | Other | La1.8.1 | None | SRR1791780 | Other | La1.8.1 | None | SRR1791873 | Other | La1.8.1 | None | SRR1792042 | Other | La1.8.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | SRR6650401 | Sensitive | lineage1.2.2.2 | None | SRR6650365 | Sensitive | lineage2.2.1 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | ERR176771 | Sensitive | None | SRR6650371 | Sensitive | lineage3 | None | ERR1199041 | Sensitive | lineage4.6.1.1 | None | SRR2467264 | Sensitive | lineage4.4.2 | None | SRR4019491 | Other | La1.7.1 | None | ERR2229200 | Sensitive | lineage4.8 | None | SRR3105776 | Pre-XDR-TB | lineage1.1.2 | None | ERR017787 | Sensitive | lineage4;lineage2.2.1 | None | ERR1200654 | Sensitive | lineage3.1.1 | None | ERR266607 | Sensitive | None | SRR857281 | MDR-TB | lineage4.3.3 | None | ERR234153 | Sensitive | lineage3 | None | ERR1199065 | Sensitive | lineage4.6.1 | None | SRR413216 | MDR-TB | lineage2.2.1 | None | ERR4818615 | Other | None | ERR019562 | Pre-XDR-TB | lineage2.2.1 | None | ERR023735 | Sensitive | lineage4.7 | None | ERR028350 | Sensitive | lineage3.1.1 | None | ERR025877 | Sensitive | None | ERR027465 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR046811 | Sensitive | lineage3 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR046740 | Sensitive | lineage4.1.1 | None | ERR046809 | Sensitive | lineage3 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR046803 | Sensitive | lineage3 | None | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046826 | Sensitive | lineage3 | None | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046909 | Sensitive | lineage4.9 | None | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR046977 | MDR-TB | lineage4.8 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046931 | Sensitive | lineage4.1.1 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046979 | Sensitive | lineage3 | None | ERR046976 | Sensitive | lineage4.1.1 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR1367680 | Sensitive | lineage4.4.1.1 | None | ERR1161620 | MDR-TB | lineage2.2.1 | None |
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