Rv2754c - c.-50A>C
Drug resistance types
186 Sensitive
2 RR-TB
3 HR-TB
14 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 9 |
| lineage4.1.1 | 26 |
| La1.7.1 | 4 |
| lineage3.1.1 | 16 |
| lineage4.8.2 | 12 |
| lineage3 | 19 |
| lineage3.1.2 | 3 |
| lineage4.1.2.1 | 14 |
| lineage4.1.1.3.1 | 21 |
| lineage1.1.2 | 11 |
| lineage4.8 | 15 |
| lineage2.2.1 | 21 |
| lineage1.2.2.2 | 3 |
| lineage1.1.3.1 | 1 |
| 4 | |
| lineage4.4.2 | 3 |
| lineage4.4.1.1 | 7 |
| lineage4.6.1.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage4.7 | 3 |
| lineage1.2.2.1 | 5 |
| lineage7 | 6 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9.1 | 2 |
| lineage4.3.4.2.1;lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.6.1 | 1 |
| lineage4.1.2 | 1 |
| lineage6 | 1 |
| lineage4.3.3 | 4 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 160 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791764 | Other | La1.8.1 | None | SRR2100070 | Sensitive | lineage4.1.1 | None | SRR1791780 | Other | La1.8.1 | None | SRR1792089 | Other | La1.8.1 | None | SRR1792124 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR1791873 | Other | La1.8.1 | None | SRR1792042 | Other | La1.8.1 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR2100077 | Sensitive | lineage3 | None | SRR2100088 | Sensitive | lineage3 | None | SRR2100081 | Sensitive | lineage3 | None | SRR2100085 | Sensitive | lineage3.1.2 | None | SRR2100093 | Sensitive | lineage4.1.1 | None | SRR2100094 | Sensitive | lineage4.1.2.1 | None | SRR2100096 | Sensitive | lineage4.1.1 | None | SRR2100101 | MDR-TB | lineage4.1.1.3.1 | None | SRR2100092 | Sensitive | lineage1.1.2 | None | SRR2100103 | Sensitive | lineage4.8 | None | SRR2100098 | Sensitive | lineage1.1.2 | None | SRR2100097 | MDR-TB | lineage4.8 | None | SRR2100099 | Sensitive | lineage3 | None | SRR6650365 | Sensitive | lineage2.2.1 | None | SRR6650401 | Sensitive | lineage1.2.2.2 | None | SRR6650206 | HR-TB | lineage1.1.3.1 | None | SRR6650371 | Sensitive | lineage3 | None | ERR176771 | Sensitive | None | SRR2469377 | Sensitive | lineage3 | None | SRR2467264 | Sensitive | lineage4.4.2 | None | SRR2469368 | Sensitive | lineage4.4.1.1 | None | SRR3105776 | Pre-XDR-TB | lineage1.1.2 | None | ERR1199041 | Sensitive | lineage4.6.1.1 | None | ERR2229200 | Sensitive | lineage4.8 | None | ERR233361 | Sensitive | lineage2.2.1.1 | None | SAMN03246408 | MDR-TB | lineage2.2.1 | cn | ERR234223 | Sensitive | lineage4.1.1.1 | us | ERR1200609 | Sensitive | lineage3 | et | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | ERR234225 | Sensitive | lineage4.7 | us | ERR1200629 | Sensitive | lineage1.2.2.1 | et | SRR4019491 | Other | La1.7.1 | None | ERR1200613 | Sensitive | lineage7 | et | ERR464771 | Sensitive | lineage4.4.1.1 | ch | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR1200612 | Sensitive | lineage7 | et | ERR234153 | Sensitive | lineage3 | None | ERR234166 | Sensitive | lineage3.1.1 | tz | ERR234183 | Other | lineage4.4.2 | vn | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR1200654 | Sensitive | lineage3.1.1 | None | ERR245745 | Sensitive | lineage4.3.4.1 | mw | ERR245742 | Sensitive | lineage1.1.2 | mw | ERR245796 | Sensitive | lineage3.1.1 | mw | ERR245750 | Sensitive | lineage4.3.4.2.1 | mw | ERR245772 | Sensitive | lineage4.9.1 | None | ERR245780 | Sensitive | lineage4.3.4.2.1 | mw | ERR245797 | Sensitive | lineage4.3.4.2.1;lineage4.3.4.1 | mw | ERR245807 | Sensitive | lineage4.7 | mw | SRR4037928 | Sensitive | lineage4.3.2.1 | za | ERR245847 | Sensitive | lineage4.9.1 | mw | ERR1200615 | Sensitive | lineage4.8 | et | ERR1199065 | Sensitive | lineage4.6.1 | None | ERR1200606 | Sensitive | lineage7 | et | ERR1200602 | Sensitive | lineage7 | et | SRR413216 | MDR-TB | lineage2.2.1 | None | ERR4818615 | Other | None | ERR234222 | Sensitive | lineage4.1.2.1 | co | ERR1200625 | Sensitive | lineage7 | et | ERR233360 | Sensitive | lineage3 | None | SAMN03246267 | Pre-XDR-TB | lineage2.2.1 | cn | ERR841406 | Other | lineage4.1.2 | ch | ERR1200610 | Sensitive | lineage7 | et | ERR233366 | Sensitive | lineage6 | None | ERR1199025 | Sensitive | lineage4.6.1.1 | ug | ERR464753 | Sensitive | lineage4.4.1.1 | ch | ERR266607 | Sensitive | None | SRR857281 | MDR-TB | lineage4.3.3 | None | ERR1199062 | Sensitive | lineage4.6.1.1 | ug | ERR1199046 | Sensitive | lineage4.6.1.1 | ug | SRR671729 | Sensitive | lineage2.2.1 | cn | ERR233347 | Sensitive | lineage3 | None | ERR017787 | Sensitive | lineage4;lineage2.2.1 | None | ERR019562 | Pre-XDR-TB | lineage2.2.1 | None | ERR019570 | Sensitive | lineage2.2.1 | None | ERR019564 | MDR-TB | lineage2.2.1 | ru | ERR019573 | Sensitive | lineage2.2.1.1 | None | ERR019571 | Sensitive | lineage2.2.1 | None | ERR019575 | MDR-TB | lineage2.2.1 | ru | ERR019574 | Other | lineage2.2.1 | None | ERR023735 | Sensitive | lineage4.7 | None | ERR025877 | Sensitive | None | ERR027458 | MDR-TB | lineage2.2.1 | ru | ERR027459 | RR-TB | lineage2.2.1 | ru | ERR027465 | MDR-TB | lineage4.9;lineage2.2.1 | None | ERR027469 | Sensitive | lineage4.8 | ru | ERR028350 | Sensitive | lineage3.1.1 | None | ERR036186 | Sensitive | lineage2.2.1 | mw | ERR036194 | Other | lineage4.6.1.2 | None | ERR036193 | Sensitive | lineage3.1.1 | mw | ERR036198 | Other | lineage4.3.4.2 | None | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR046867 | Sensitive | lineage3.1.1 | gb | ERR046856 | MDR-TB | lineage1.1.2 | gb | ERR046868 | Sensitive | lineage4.1.1.3 | gb | ERR046869 | Sensitive | lineage4.1.1.3 | gb | ERR046875 | Sensitive | lineage4.1.2.1 | gb | ERR046891 | Sensitive | lineage1.1.2 | gb | ERR046894 | Sensitive | lineage4.3.3 | gb | ERR046904 | Sensitive | lineage4.1.1.3.1 | gb | ERR046915 | Sensitive | lineage1.1.2 | gb | ERR046908 | Sensitive | lineage4.1.1.3.1 | gb | ERR046920 | Sensitive | lineage4.8.2 | gb | ERR046928 | Sensitive | lineage4.8.2 | gb | ERR046934 | Sensitive | lineage3 | gb | ERR046937 | Sensitive | lineage4.1.2.1 | gb | ERR046946 | Sensitive | lineage4.1.1 | gb | ERR046938 | Sensitive | lineage2.2.1 | gb | ERR046945 | Sensitive | lineage1.2.2.2 | gb | ERR046949 | Sensitive | lineage2.2.1 | gb | ERR046957 | Sensitive | lineage4.1.2.1 | gb | ERR046960 | Sensitive | lineage4.1.1 | gb | ERR046963 | Sensitive | lineage2.2.1 | gb | ERR046971 | Sensitive | lineage4.1.1 | gb | ERR046965 | Sensitive | lineage3.1.1 | gb | ERR046966 | Sensitive | lineage2.2.1 | gb | ERR046978 | Sensitive | lineage1.1.2 | None | ERR046976 | Sensitive | lineage4.1.1 | None | ERR046982 | Other | lineage3.1.1 | gb | ERR046972 | Sensitive | lineage4.1.2.1 | gb | ERR047012 | Sensitive | lineage4.3.1.1 | gb | ERR047006 | Sensitive | lineage4.8.1 | gb | ERR037516 | Sensitive | lineage4.3.4.1 | mw | ERR037531 | Sensitive | lineage4.3.2.1 | mw | ERR037543 | Sensitive | lineage4.8 | mw | ERR038278 | Sensitive | lineage4.1.1 | gb | ERR038297 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR038296 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR038290 | Sensitive | lineage4.3.3 | gb | ERR039342 | Sensitive | lineage4.8 | gb | ERR040106 | Sensitive | lineage3.1.1 | gb | ERR046735 | Sensitive | lineage4.1.1 | gb | ERR046740 | Sensitive | lineage4.1.1 | None | ERR046736 | Sensitive | lineage4.1.1 | gb | ERR046733 | Sensitive | lineage4.1.1 | gb | ERR046745 | Sensitive | lineage4.1.1 | gb | ERR046746 | Sensitive | lineage4.1.1 | gb | ERR046738 | Sensitive | lineage4.1.1 | gb | ERR046758 | Sensitive | lineage4.8.2 | gb | ERR046754 | Sensitive | lineage4.8.2 | gb | ERR046760 | Sensitive | lineage4.8.2 | gb | ERR046759 | Sensitive | lineage4.8.2 | gb | ERR046768 | Sensitive | lineage4.8.2 | gb | ERR046773 | Sensitive | lineage3.1.1 | gb | ERR046779 | Sensitive | lineage3 | gb | ERR046783 | Sensitive | lineage4.1.1.3.1 | gb | ERR046776 | Sensitive | lineage4.8.1 | gb | ERR046789 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046785 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046780 | HR-TB | lineage3 | gb | ERR046781 | Sensitive | lineage4.4.1.2 | gb | ERR046792 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046787 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046786 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046788 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046790 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046793 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046794 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046800 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046803 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046811 | Sensitive | lineage3 | None | ERR046820 | Sensitive | lineage4.8.2 | gb | ERR046822 | Sensitive | lineage4.1.1.3.1 | gb | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046826 | Sensitive | lineage3 | None | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046832 | Sensitive | lineage1.1.2 | gb | ERR046831 | Sensitive | lineage4.8 | gb | ERR046838 | Sensitive | lineage4.6.2.1 | gb | ERR046835 | Sensitive | lineage4.4.1.1 | None | ERR046844 | Other | lineage1.2.2.1 | gb | ERR046848 | Sensitive | lineage1.2.2.1 | gb | ERR046842 | Sensitive | lineage4.1.1 | gb | ERR046851 | Sensitive | lineage4.1.1.3.1 | gb | ERR046840 | Sensitive | lineage4.1.1 | gb | ERR046858 | Sensitive | lineage3.1.1 | gb | ERR046860 | Sensitive | lineage3.1.1 | gb | ERR046865 | Sensitive | lineage4.1.4 | gb | ERR046871 | Sensitive | lineage4.3.4.2.1 | gb | ERR046863 | Sensitive | lineage3 | gb | ERR046873 | Sensitive | lineage4.1.2.1 | gb | ERR046874 | Sensitive | lineage4.1.2.1 | gb | ERR046879 | Sensitive | lineage4.8.2 | gb | ERR046870 | Sensitive | lineage4.3.4.2.1 | gb | ERR046877 | Sensitive | lineage4.8.2 | gb | ERR046880 | Sensitive | lineage1.2.2.2 | gb | ERR046893 | Other | lineage1.2.2.1 | gb | ERR046897 | Sensitive | lineage4.4.1.1 | gb | ERR046901 | Sensitive | lineage4.4.1.1 | gb | ERR046900 | Sensitive | lineage1.1.2 | gb | ERR046899 | Sensitive | lineage4.8 | None | ERR046913 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046909 | Sensitive | lineage4.9 | None | ERR046906 | Sensitive | lineage4.1.1 | gb | ERR046910 | Sensitive | lineage4.1.1.3.1 | gb | ERR046914 | Sensitive | lineage3.1.1 | gb | ERR046926 | Sensitive | lineage4.8.2 | gb | ERR046922 | Other | lineage4.2.2 | gb | ERR046932 | Sensitive | lineage4.8 | gb | ERR046924 | Sensitive | lineage4.1.1 | gb | ERR046935 | Sensitive | lineage4.4.2 | gb | ERR046931 | Sensitive | lineage4.1.1 | None | ERR046930 | Sensitive | lineage4.8 | gb | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR046941 | Sensitive | lineage3.1.2.2 | gb | ERR046942 | Sensitive | lineage3.1.1 | gb | ERR046943 | RR-TB | lineage4.1.1 | gb | ERR046952 | Sensitive | lineage4.8 | gb | ERR046954 | Other | La1.8.1 | gb | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046959 | Sensitive | lineage4.1.2.1 | gb | ERR046958 | Sensitive | lineage4.1.2.1 | gb | ERR046961 | Other | La1.8.1 | gb | ERR046962 | Sensitive | lineage4.1.1 | gb | ERR046964 | Sensitive | lineage4.1.1 | gb | ERR046967 | Sensitive | lineage2.2.1 | gb | ERR046969 | Sensitive | lineage3.1.1 | gb | ERR046974 | Sensitive | lineage4.1.2.1 | gb | ERR046980 | Sensitive | lineage4.1.1 | gb | ERR046979 | Sensitive | lineage3 | None | ERR046977 | MDR-TB | lineage4.8 | None | ERR046986 | MDR-TB | lineage4.1.1 | gb | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR046990 | Sensitive | lineage4.1.2.1 | gb | ERR046991 | Sensitive | lineage4.1.1 | gb | ERR046992 | Sensitive | lineage4.1.2.1 | gb | ERR047002 | HR-TB | lineage1.1.2 | gb | ERR047008 | Sensitive | lineage4.8.1 | gb | ERR047015 | Sensitive | lineage4.8 | None | ERR1367680 | Sensitive | lineage4.4.1.1 | None | ERR1161620 | MDR-TB | lineage2.2.1 | None | ERR9286032 | Other | lineage4.3.3 | None |
|---|
