lineage | Count |
---|---|
lineage4.8 | 5 |
lineage1.2.1.2.1 | 3 |
lineage2.2.1 | 4 |
lineage1.2.2.2 | 1 |
lineage4.4.2 | 2 |
4 | |
lineage4.1.2.1 | 8 |
lineage3 | 4 |
lineage1.1.1.1 | 1 |
lineage2.2.2 | 1 |
La1.7.1 | 4 |
lineage4.3.1.1 | 1 |
lineage3.1.1 | 3 |
lineage2.1 | 2 |
La3 | 1 |
lineage4.9 | 2 |
lineage4.1.2 | 3 |
lineage4.3.2 | 1 |
lineage4.2.2.1 | 1 |
lineage4;lineage3.1.1;lineage1 | 1 |
lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | 1 |
lineage4.1;lineage1.1.1.1 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.3.4.2.1;lineage1.1.3 | 1 |
lineage4.8.1 | 1 |
lineage4.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.4.1.1 | 1 |
La1.8.1 | 5 |
La1.7 | 1 |
spoligotype | Count |
---|---|
None | 68 |
ID | Drug resistance | Lineage | Country iso2 | ERR233369 | Other | lineage4.8 | et | SRR18897179 | Sensitive | lineage1.2.1.2.1 | None | SRR2101605 | Sensitive | lineage2.2.1 | None | SRR6650428 | Sensitive | lineage1.2.2.2 | None | SRR2467264 | Sensitive | lineage4.4.2 | None | ERR1750907 | RR-TB | None | ERR551255 | Sensitive | lineage4.1.2.1 | None | SRR6650283 | Sensitive | lineage3 | None | ERR4815430 | Other | lineage4.8 | None | ERR4814675 | HR-TB | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR5065495 | Sensitive | lineage1.1.1.1 | vn | SRR4033468 | Other | lineage2.2.2 | None | SRR4019488 | Other | La1.7.1 | None | ERR4816690 | Other | None | SRR6045064 | Other | lineage4.3.1.1 | None | ERR245832 | HR-TB | lineage3.1.1 | mw | ERR245753 | Other | lineage3 | mw | SRR5065275 | Sensitive | lineage2.2.1 | vn | ERR2513708 | Sensitive | lineage2.1 | None | ERR2659155 | Sensitive | La3 | None | SRR6046308 | Sensitive | lineage4.9 | None | ERR025425 | Other | lineage4.1.2 | None | ERR024338 | Sensitive | lineage4.3.2 | None | ERR025435 | Sensitive | lineage4.2.2.1 | nl | ERR028343 | HR-TB | lineage4;lineage3.1.1;lineage1 | None | ERR025841 | RR-TB | lineage4.1.2.1 | None | ERR025833 | Sensitive | lineage3.1.1 | gb | ERR025881 | Sensitive | lineage2.1 | None | ERR025895 | HR-TB | lineage1.2.1.2.1 | None | ERR028317 | Sensitive | lineage6;lineage5.1;lineage4.2.2;lineage1.1.3.1;lineage1.1.1 | None | ERR025848 | Sensitive | lineage4.1.2.1 | gb | ERR025894 | Sensitive | lineage1.2.1.2.1 | None | ERR027295 | Sensitive | None | ERR028368 | Sensitive | lineage2.2.1 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | ERR036238 | Sensitive | lineage4.3.4.2.1 | mw | ERR036215 | Other | lineage4.8 | None | ERR036240 | Sensitive | lineage4.3.4.2.1 | mw | ERR036200 | Sensitive | lineage4.1.2 | None | ERR036209 | Other | lineage3 | mw | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR046777 | HR-TB | lineage4.8.1 | gb | ERR036249 | HR-TB | lineage4.1.2.1 | mw | ERR3588225 | Sensitive | lineage4.8 | None | ERR046837 | Sensitive | lineage4.3.4.2.1 | gb | ERR046968 | Sensitive | lineage3.1.1 | gb | ERR046999 | Sensitive | lineage4.8 | gb | ERR046935 | Sensitive | lineage4.4.2 | gb | ERR046964 | Sensitive | lineage4.1.1 | gb | ERR10748211 | MDR-TB | lineage2.2.1 | None | ERR10796550 | HR-TB | lineage4.1.2 | None | SRR023454 | MDR-TB | lineage4.3.4.2 | None | ERR4407530 | HR-TB | lineage4.1.2.1 | None | ERR9899672 | Sensitive | lineage4.1.2.1 | None | SRR10272562 | Sensitive | lineage4.4.1.1 | None | SRR023452 | RR-TB | lineage4.1.2.1 | None | SRR034936 | Sensitive | lineage4.9 | None | SRR11972311 | Pre-XDR-TB | None | SRR14296405 | Other | La1.8.1 | None | SRR1791776 | Other | La1.7.1 | None | SRR1791912 | Other | La1.8.1 | None | SRR1791995 | Other | La1.8.1 | None | SRR1792002 | Other | La1.7.1 | None | SRR1792106 | Other | La1.8.1 | None | SRR1792124 | Other | La1.8.1 | None | SRR1792251 | Other | La1.7.1 | None | SRR17156530 | Other | La1.7 | None |
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