Rv2764c - c.-24C>T


Drug resistance types
12 Sensitive 2 RR-TB 49 HR-TB 197 MDR-TB 99 Pre-XDR-TB 8 XDR-TB 1 Other
lineage Counts
lineage Count
lineage4 124
lineage4.2.2.1 3
lineage2.2.2 22
lineage2.2.1 84
lineage4.3.2 32
lineage1.1.3.2 1
lineage4.1.2.1 29
lineage4.3.2.1 2
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
lineage4.8 2
lineage3 9
lineage4.1.1 1
lineage4.6.1.1 2
lineage3.1.2 3
lineage4.1.1.1 2
lineage4.4.1.1 11
lineage3.1.2.1 2
lineage2.2.1.1 2
2
lineage4.2.1.1 1
lineage4.3.4.2 4
lineage4.9 2
lineage2.2.1;lineage3.1.2 1
lineage4.4.2 1
lineage3.1 2
lineage1.1.1 6
lineage1.2.1.2.1 3
lineage4.6.2.2 1
lineage4.4 1
lineage1.2.2.2 1
lineage4.1.2.1;lineage4.4.1.1 2
lineage2.2;lineage4 1
lineage1.1.3.1 1
lineage2.1;lineage2.2.1 2
lineage4.1.2 1
lineage2.2.1;lineage4.4.1.1 1
lineage2.2.1.2 1
lineage2.1 1
spoligotype Counts
spoligotype Count
None 368
Geographic prevalence
Country level data for this variant is available for 112 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2516541 Pre-XDR-TB lineage4 pe
ERR8773558 MDR-TB lineage4.2.2.1 None
ERR3287505 MDR-TB lineage4 None
SRR1144768 Pre-XDR-TB lineage2.2.2 None
SRR12420441 MDR-TB lineage2.2.1 None
SRR28394254 MDR-TB lineage4.3.2 None
SRR28393624 MDR-TB lineage4 None
SRR28393954 MDR-TB lineage4 None
SRR28385882 MDR-TB lineage2.2.2 None
ERR11252440 HR-TB lineage1.1.3.2 None
SRR28394271 Pre-XDR-TB lineage4 None
SRR28394078 MDR-TB lineage4 None
ERR11773825 Pre-XDR-TB lineage2.2.1 None
SRR28385881 MDR-TB lineage2.2.2 None
ERR3287473 HR-TB lineage4 pe
ERR7339051 MDR-TB lineage4 None
SRR16370523 Pre-XDR-TB lineage2.2.1 None
ERR3287443 MDR-TB lineage4 pe
ERR11081387 MDR-TB lineage4.3.2 None
SRR14782752 Sensitive lineage4.1.2.1 None
ERR4457925 MDR-TB lineage4 None
ERR5918086 HR-TB lineage4.3.2.1 za
ERR403300 HR-TB lineage2.2.1;lineage4 None
SRR1368336 Pre-XDR-TB lineage2.2.1 None
ERR751478 MDR-TB lineage4 pe
ERR751526 MDR-TB lineage4 pe
ERR4813603 MDR-TB lineage4 None
SRR3742670 Pre-XDR-TB lineage2.2.1 None
ERR4813115 MDR-TB lineage4 None
ERR9029870 MDR-TB lineage4 None
ERR751452 Pre-XDR-TB lineage4 pe
SRR16588743 MDR-TB lineage2.2.1 None
ERR4809319 Pre-XDR-TB lineage2.2.2 za
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SAMEA5569642 Pre-XDR-TB lineage4 None
ERR2041750 MDR-TB lineage4.1.2.1 rs
SRR24255920 Pre-XDR-TB lineage2.2.1 None
SRR2075822 Pre-XDR-TB lineage2.2.2 None
ERR4813495 HR-TB lineage4 None
ERR4812681 MDR-TB lineage4 pe
SRR10379898 Pre-XDR-TB lineage2.2.1 None
ERR751447 MDR-TB lineage4 pe
SRR6356930 Pre-XDR-TB lineage4.8 None
ERR2510241 HR-TB lineage4.3.2 pe
ERR4813099 Pre-XDR-TB lineage2.2.1 pe
SRR1163300 MDR-TB lineage4 None
ERR751414 MDR-TB lineage4 None
ERR3287536 MDR-TB lineage4 None
ERR2513838 Sensitive lineage3 gb
SRR25389521 Pre-XDR-TB lineage2.2.1 None
SRR6964642 MDR-TB lineage3 None
ERR751531 MDR-TB lineage4 pe
ERR4812846 MDR-TB lineage4.3.2 None
SRR12420529 MDR-TB lineage2.2.1 None
ERR3287660 HR-TB lineage4.1.1 pe
ERR4813333 MDR-TB lineage4 None
SRR25389452 HR-TB lineage2.2.1 None
ERR6358869 MDR-TB lineage4.6.1.1 None
DRR473694 Other lineage2.2.1 None
ERR4797854 MDR-TB lineage3.1.2 in
SRR15369003 Pre-XDR-TB lineage2.2.1 None
ERR4178214 MDR-TB lineage4.3.2 None
SRR17703718 HR-TB lineage2.2.1 None
SRR1048858 Pre-XDR-TB lineage2.2.2 None
SRR3742661 XDR-TB lineage2.2.1 None
ERR3287558 MDR-TB lineage4 None
SRR5709891 Pre-XDR-TB lineage2.2.1 th
SRR21747045 MDR-TB lineage2.2.1 None
SRR18002957 HR-TB lineage2.2.1 None
ERR4457827 MDR-TB lineage4 None
ERR6865772 MDR-TB lineage4.3.2 None
SAMEA5569750 MDR-TB lineage4 None
SRR21662805 HR-TB lineage4.1.1.1 None
ERR3287721 MDR-TB lineage4 pe
ERR10680120 MDR-TB lineage4.1.2.1 None
SRR5065701 HR-TB lineage4.1.2.1 vn
ERR4178215 HR-TB lineage4 None
ERR4813306 MDR-TB lineage4 pe
SRR7068957 Sensitive lineage3 None
SRR22528545 MDR-TB lineage4.4.1.1 None
SRR22251625 Sensitive lineage4.1.2.1 None
SRR22528528 MDR-TB lineage4.4.1.1 None
SRR2100331 MDR-TB lineage3.1.2.1 None
SRR25389451 HR-TB lineage2.2.1 None
SRR10828180 Pre-XDR-TB lineage2.2.1 None
ERR4457805 MDR-TB lineage4 None
SRR16370546 MDR-TB lineage2.2.1 None
SRR10869126 Pre-XDR-TB lineage2.2.2 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1163141 MDR-TB lineage4 None
ERR2516521 MDR-TB lineage4 nl
ERR11081388 MDR-TB lineage4.3.2 None
SRR7517714 MDR-TB lineage4.2.2.1 ch
SRR3742656 Pre-XDR-TB lineage2.2.1 None
ERR1465793 MDR-TB lineage4.1.2.1 None
SRR3742660 XDR-TB lineage2.2.1 None
ERR2516458 MDR-TB lineage4 pe
SRR22528547 MDR-TB lineage4.4.1.1 None
ERR7911646 Pre-XDR-TB lineage2.2.2 za
ERR3639722 MDR-TB lineage4.3.2 None
SRR1048859 Pre-XDR-TB lineage2.2.2 None
ERR4457843 MDR-TB lineage4 None
ERR4798187 Pre-XDR-TB lineage2.2.1 in
ERR4024944 MDR-TB lineage4 None
SRR1368335 Pre-XDR-TB lineage2.2.1 None
SRR10305734 HR-TB lineage2.2.1 None
ERR4827634 HR-TB lineage2.2.1 None
ERR2984791 MDR-TB lineage4.4.1.1 None
ERR4812772 MDR-TB lineage4 pe
SRR3742658 Pre-XDR-TB lineage2.2.1.1 None
ERR2510234 MDR-TB lineage4 pe
ERR4457819 HR-TB lineage4 None
ERR3287597 MDR-TB lineage4 pe
ERR2184625 Pre-XDR-TB lineage4.1.2.1 None
ERR3287774 MDR-TB lineage4.3.2 pe
SRR22528544 MDR-TB lineage4.4.1.1 None
ERR1034737 MDR-TB lineage4 pe
ERR4798914 Pre-XDR-TB lineage4.1.2.1 in
ERR2516414 MDR-TB lineage4 pe
SRR2075820 Pre-XDR-TB lineage2.2.2 None
ERR2516472 MDR-TB lineage4 pe
ERR3287449 Pre-XDR-TB lineage4 None
SRR21887777 Pre-XDR-TB lineage2.2.1 None
ERR7910889 MDR-TB lineage4 None
SRR21576586 MDR-TB lineage2.2.1 None
SRR10808879 Pre-XDR-TB lineage4.1.2.1 None
ERR4813435 MDR-TB lineage4.3.2 pe
ERR3132085 HR-TB lineage2.2.1 None
ERR4813549 MDR-TB lineage4 None
SRR14782156 Pre-XDR-TB lineage2.2.1 None
ERR3639758 MDR-TB lineage2.2.1 None
ERR2307396 Pre-XDR-TB lineage2.2.1 None
SRR28393572 MDR-TB lineage4 None
ERR4553810 MDR-TB None
SRR27069397 Pre-XDR-TB lineage2.2.1 None
SRR28394260 MDR-TB lineage4 None
SRR28393361 MDR-TB lineage4 None
ERR11773769 Pre-XDR-TB lineage2.2.1 None
SRR28394269 MDR-TB lineage4 None
SRR28393911 MDR-TB lineage4.3.2 None
SRR28393369 MDR-TB lineage4 None
SRR28393265 MDR-TB lineage4 None
SRR28393394 MDR-TB lineage4.3.2 None
SRR28394190 MDR-TB lineage4 None
ERR4553700 MDR-TB None
SRR28394278 MDR-TB lineage4 None
SRR28393306 MDR-TB lineage4 None
SRR28394212 MDR-TB lineage4 None
SRR28393689 MDR-TB lineage4 None
ERR751521 MDR-TB lineage4 pe
ERR751620 Pre-XDR-TB lineage4 pe
ERR3287846 Pre-XDR-TB lineage4 pe
ERR4796797 HR-TB lineage3.1.2 in
SRR13870364 Pre-XDR-TB lineage4 None
SRR6256995 HR-TB lineage4.2.1.1 None
ERR4819237 HR-TB lineage4.3.4.2 gb
ERR3287644 MDR-TB lineage4.3.2 pe
ERR4812883 MDR-TB lineage4.9 pe
SRR6280281 HR-TB lineage2.2.1 cn
ERR4811935 HR-TB lineage4 pe
ERR2516509 MDR-TB lineage4 pe
SRR22528541 MDR-TB lineage4.4.1.1 None
ERR6866694 MDR-TB lineage4.3.2 None
ERR2199762 MDR-TB lineage4.3.2 None
ERR775321 MDR-TB lineage4 pe
ERR4812987 Pre-XDR-TB lineage4.1.2.1 pe
ERR2510565 MDR-TB lineage3 None
ERR4812060 HR-TB lineage4 pe
ERR4024541 HR-TB lineage4 None
ERR9029844 MDR-TB lineage4 None
ERR2512629 Sensitive lineage3 gb
SRR2075817 Pre-XDR-TB lineage2.2.2 None
SRR6797637 HR-TB lineage4.1.1.1 None
ERR11081398 Sensitive lineage4.1.2.1 None
ERR751411 MDR-TB lineage4 pe
ERR4797638 Pre-XDR-TB lineage2.2.1;lineage3.1.2 in
SRR9738529 MDR-TB lineage4.1.2.1 None
ERR775316 HR-TB lineage4.3.2 pe
SRR7069818 Sensitive lineage3 None
ERR11081755 MDR-TB lineage2.2.1 None
SRR15315823 MDR-TB lineage4.4.2 None
ERR12118063 MDR-TB lineage4.3.2 None
ERR114483 MDR-TB lineage3.1.2.1 None
ERR4797739 Pre-XDR-TB lineage3.1 in
ERR4798184 Pre-XDR-TB lineage3 in
ERR11082091 MDR-TB lineage4 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6280289 HR-TB lineage2.2.1 cn
SRR12420762 HR-TB lineage2.2.1 None
SRR6280174 Pre-XDR-TB lineage2.2.1 cn
SRR22528585 MDR-TB lineage4.4.1.1 None
ERR3287441 MDR-TB lineage4.3.2 pe
SRR1368341 Pre-XDR-TB lineage2.2.1.1 None
ERR3287696 MDR-TB lineage4 pe
ERR4797898 XDR-TB lineage2.2.1 in
ERR10680047 MDR-TB lineage1.1.1 None
ERR2516503 Pre-XDR-TB lineage4 pe
ERR7911326 MDR-TB lineage2.2.1 vn
SRR1510049 HR-TB lineage1.2.1.2.1 None
ERR8773556 MDR-TB lineage4.2.2.1 None
ERR047880 MDR-TB lineage1.1.1 ru
ERR3287555 MDR-TB lineage4 None
ERR551151 HR-TB lineage4.6.2.2 None
SRR17234892 MDR-TB lineage4 None
ERR12117965 MDR-TB lineage4 None
ERR4819244 HR-TB lineage1.2.1.2.1 gb
ERR4797564 Pre-XDR-TB lineage2.2.1 in
SRR1368334 Pre-XDR-TB lineage2.2.1 None
ERR751540 MDR-TB lineage4 pe
DRR130091 Pre-XDR-TB lineage2.2.1 None
SRR16156704 Pre-XDR-TB lineage2.2.2 None
ERR12118009 MDR-TB lineage4 None
ERR751561 MDR-TB lineage4.3.2 pe
SRR25389520 Pre-XDR-TB lineage2.2.1 None
SRR1368333 Pre-XDR-TB lineage2.2.1 None
ERR4797674 XDR-TB lineage2.2.1 in
ERR1213865 MDR-TB lineage2.2.2 kr
ERR11050979 MDR-TB lineage4.4 None
ERR4813198 Pre-XDR-TB lineage4.3.2 pe
SRR14801923 Sensitive lineage4.1.2.1 None
ERR3794505 Pre-XDR-TB lineage2.2.1 None
SRR28393432 MDR-TB lineage4.3.2 None
SRR28393848 MDR-TB lineage4 None
SRR28393318 MDR-TB lineage4 None
SRR28393626 MDR-TB lineage4 None
SRR28394268 MDR-TB lineage4 None
SRR28394232 MDR-TB lineage4 None
SRR28046106 Pre-XDR-TB lineage3 None
SRR28394044 MDR-TB lineage4 None
SRR28393721 MDR-TB lineage4.3.2 None
SRR28393529 MDR-TB lineage4 None
SRR28393997 Pre-XDR-TB lineage4.3.4.2 None
SRR28394070 Pre-XDR-TB lineage4 None
SRR28393551 Pre-XDR-TB lineage4 None
SRR28394009 MDR-TB lineage4.3.2 None
SRR28351331 RR-TB lineage1.2.2.2 None
SRR28393349 MDR-TB lineage4 None
SRR28385876 Pre-XDR-TB lineage2.2.2 None
SRR28393600 Pre-XDR-TB lineage4 None
SRR28393423 MDR-TB lineage4 None
SRR28393378 MDR-TB lineage4 None
SRR22528536 MDR-TB lineage4.1.2.1;lineage4.4.1.1 None
ERR7910890 MDR-TB lineage4 None
ERR4457776 MDR-TB lineage4 None
ERR2307713 Pre-XDR-TB lineage2.2.1 None
ERR4809156 MDR-TB lineage4.3.2.1 za
ERR4457861 MDR-TB lineage4 None
SRR11662497 MDR-TB lineage2.2.1 None
ERR4821237 HR-TB lineage4.3.4.2 gb
ERR4025141 MDR-TB lineage4.3.2 None
ERR4178287 MDR-TB lineage4 None
DRR474011 MDR-TB lineage2.2.1 None
ERR1213856 HR-TB lineage2.2.1 kr
SRR1144804 RR-TB lineage2.2;lineage4 None
SRR24710169 MDR-TB lineage2.2.1 None
ERR1034755 MDR-TB lineage4 pe
ERR4819966 HR-TB lineage3.1.2 gb
ERR2199763 MDR-TB lineage4.3.2 de
SRR2075823 Pre-XDR-TB lineage2.2.2 None
SRR14782560 Sensitive lineage4.1.2.1 None
ERR11081605 MDR-TB lineage4.1.2.1 None
ERR6865692 MDR-TB lineage4.3.2 None
ERR4811074 HR-TB lineage2.2.1 cn
ERR2510175 MDR-TB lineage4 pe
SRR3742662 XDR-TB lineage2.2.1 None
ERR4812485 Pre-XDR-TB lineage4 pe
SRR12882496 HR-TB lineage1.1.1 None
SAMEA5569751 MDR-TB lineage4 None
SRR6356936 Pre-XDR-TB lineage4.8 None
SRR17234901 MDR-TB lineage4.3.2 None
ERR12115310 MDR-TB lineage1.1.3.1 None
ERR3287864 MDR-TB lineage4 pe
SRR2024961 Pre-XDR-TB lineage2.2.1 cn
SRR12420442 MDR-TB lineage2.2.1 None
ERR2041757 MDR-TB lineage4.1.2.1 rs
ERR3287557 MDR-TB lineage4 None
ERR1367634 MDR-TB lineage4.1.2.1 None
SRR10828181 MDR-TB lineage2.1;lineage2.2.1 None
ERR4813512 MDR-TB lineage4.3.2 None
SRR3742659 Pre-XDR-TB lineage2.2.1 None
SRR25207134 MDR-TB lineage2.2.1 None
ERR1034756 HR-TB lineage4 pe
ERR4457924 MDR-TB lineage4 None
ERR3287527 MDR-TB lineage4 None
ERR4813465 HR-TB lineage4 pe
ERR1034753 HR-TB lineage4.1.2 pe
SRR1013560 Pre-XDR-TB lineage2.2.2 None
ERR3287445 MDR-TB lineage4 pe
SRR15217980 HR-TB lineage4 None
SRR22528529 MDR-TB lineage4.4.1.1 None
SAMN02360559 Pre-XDR-TB lineage2.2.2 kr
ERR751488 MDR-TB lineage4 pe
ERR4553807 MDR-TB lineage4.3.4.2 None
SRR25389519 Pre-XDR-TB lineage2.2.1 None
SRR10379888 Sensitive lineage4.1.2.1 None
ERR9029867 Pre-XDR-TB lineage4 None
ERR4813023 MDR-TB lineage4.3.2 None
ERR5979435 Pre-XDR-TB lineage3.1 None
ERR4800424 Pre-XDR-TB lineage4.1.2.1 in
SRR10341351 MDR-TB lineage2.1;lineage2.2.1 None
ERR12117938 MDR-TB lineage4 None
SRR22528542 MDR-TB lineage2.2.1;lineage4.4.1.1 None
ERR779883 MDR-TB lineage4 pe
ERR11138646 Pre-XDR-TB lineage2.2.1 None
ERR4025071 MDR-TB lineage4 None
SRR10076614 Sensitive lineage4.9 None
SRR5709869 Pre-XDR-TB lineage2.2.1 th
ERR3132100 MDR-TB lineage2.2.2 None
ERR9125111 HR-TB lineage1.2.1.2.1 None
SRR7341672 MDR-TB lineage4.1.2.1 ro
ERR4811872 HR-TB lineage4 pe
SRR22528548 MDR-TB lineage4.4.1.1 None
ERR551787 HR-TB lineage4.1.2.1 de
ERR2516650 Pre-XDR-TB lineage4 pe
SRR10040521 MDR-TB lineage2.2.1 None
ERR4797563 Pre-XDR-TB lineage2.2.1 in
SRR21887692 Pre-XDR-TB lineage2.2.1 None
ERR6358868 MDR-TB lineage4.6.1.1 None
SRR21276934 MDR-TB lineage2.2.1 None
SRR14782757 Sensitive lineage4.1.2.1 None
SRR2024955 Pre-XDR-TB lineage2.2.1 cn
ERR5866483 Pre-XDR-TB lineage2.2.1 None
ERR751630 MDR-TB lineage4.3.2 pe
ERR2516548 MDR-TB lineage4 pe
SAMEA3715558 MDR-TB lineage4.1.2.1 rs
SRR2075818 Pre-XDR-TB lineage2.2.2 None
SRR1013559 Pre-XDR-TB lineage2.2.2 None
SAMN02398708 Pre-XDR-TB lineage2.2.2 kr
SRR16089549 MDR-TB lineage4.4.1.1 None
ERR2514909 HR-TB lineage4.4.1.1 gb
SRR1368338 XDR-TB lineage2.2.1 None
SRR3742655 Pre-XDR-TB lineage2.2.1 None
ERR751465 MDR-TB lineage4 pe
SRR1368340 Pre-XDR-TB lineage2.2.1 None
SRR22528530 MDR-TB lineage4.1.2.1;lineage4.4.1.1 None
SRR3743384 Pre-XDR-TB lineage2.2.1 None
SRR1368337 XDR-TB lineage2.2.1 None
ERR3287360 MDR-TB lineage4 pe
ERR117618 Pre-XDR-TB lineage1.1.1 None
ERR5865859 Pre-XDR-TB lineage2.2.1 None
SRR10040368 Pre-XDR-TB lineage2.2.1.2 None
SRR12420637 MDR-TB lineage2.2.1 None
ERR11082310 MDR-TB lineage4.1.2.1 None
ERR2516203 Pre-XDR-TB lineage2.2.1 be
SRR1368339 XDR-TB lineage2.2.1 None
SRR16088462 Pre-XDR-TB lineage2.2.1 None
ERR751356 MDR-TB lineage4 pe
ERR7339052 MDR-TB lineage4 None
ERR4800303 Pre-XDR-TB lineage4.1.2.1 in
ERR3639820 MDR-TB lineage4.1.2.1 None
ERR4457811 MDR-TB lineage4 None
SRR25206983 MDR-TB lineage2.2.1 None
ERR3287791 MDR-TB lineage4 pe
ERR3639795 Pre-XDR-TB lineage2.2.1 None
ERR4025041 MDR-TB lineage4 None
SRR11662326 Pre-XDR-TB lineage2.1 None
ERR3287735 MDR-TB lineage4 pe
ERR4799165 Pre-XDR-TB lineage3 in
ERR2516678 MDR-TB lineage4 pe
ERR4812818 MDR-TB lineage4.3.2 None
ERR6866122 MDR-TB lineage4.3.2 None
ERR4457792 HR-TB lineage4 None
ERR11138602 HR-TB lineage2.2.2 None
ERR047884 MDR-TB lineage1.1.1 gb
ERR4798912 Pre-XDR-TB lineage4.1.2.1 in
ERR2503374 Pre-XDR-TB lineage2.2.1 None
SRR12882492 HR-TB lineage1.1.1 None
SRR14801878 HR-TB lineage2.2.1 None