SRR11662497
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801878
|
HR-TB
|
lineage2.2.1
|
None
|
SRR17234892
|
MDR-TB
|
lineage4
|
None
|
ERR1034756
|
HR-TB
|
lineage4
|
pe
|
ERR2199763
|
MDR-TB
|
lineage4.3.2
|
de
|
SRR11662326
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR13260439
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR4811074
|
HR-TB
|
lineage2.2.1
|
cn
|
ERR5918086
|
HR-TB
|
lineage4.3.2.1
|
za
|
ERR9029867
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1510049
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
SRR16370546
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4812485
|
Pre-XDR-TB
|
lineage4
|
pe
|
SRR28393624
|
MDR-TB
|
lineage4
|
None
|
ERR13261893
|
MDR-TB
|
lineage4
|
None
|
SAMN02398708
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR4178287
|
MDR-TB
|
lineage4
|
None
|
SRR28385881
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28393369
|
MDR-TB
|
lineage4
|
None
|
ERR13258455
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5865859
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516548
|
MDR-TB
|
lineage4
|
pe
|
ERR2516650
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4813198
|
Pre-XDR-TB
|
lineage4.3.2
|
pe
|
ERR4827634
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13260133
|
MDR-TB
|
lineage4.1.2
|
None
|
SRR21747045
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081387
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4025071
|
MDR-TB
|
lineage4
|
None
|
ERR751526
|
MDR-TB
|
lineage4
|
pe
|
ERR2516503
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR4813115
|
MDR-TB
|
lineage4
|
None
|
SRR2075818
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR751452
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR403300
|
HR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR24255920
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866694
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13260301
|
MDR-TB
|
lineage4
|
None
|
ERR4797854
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4813495
|
HR-TB
|
lineage4
|
None
|
ERR4798912
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
SRR10379898
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260344
|
MDR-TB
|
lineage4
|
None
|
SRR17703718
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6356930
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR2510241
|
HR-TB
|
lineage4.3.2
|
pe
|
SRR28394260
|
MDR-TB
|
lineage4
|
None
|
SRR28393432
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13265018
|
HR-TB
|
lineage4.5
|
None
|
SRR29539230
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5709891
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
ERR4812060
|
HR-TB
|
lineage4
|
pe
|
ERR1213865
|
MDR-TB
|
lineage2.2.2
|
kr
|
SRR28393848
|
MDR-TB
|
lineage4
|
None
|
ERR13260240
|
MDR-TB
|
lineage4
|
None
|
SRR17234901
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR25389521
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3742662
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR11082091
|
MDR-TB
|
lineage4
|
None
|
SRR28394190
|
MDR-TB
|
lineage4
|
None
|
SRR10040521
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751478
|
MDR-TB
|
lineage4
|
pe
|
SRR25206983
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4457925
|
MDR-TB
|
lineage4
|
None
|
ERR4457924
|
MDR-TB
|
lineage4
|
None
|
ERR6358869
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR3287527
|
MDR-TB
|
lineage4
|
None
|
SRR15369003
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15217980
|
HR-TB
|
lineage4
|
None
|
SRR6797637
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR3287555
|
MDR-TB
|
lineage4
|
None
|
ERR4457827
|
MDR-TB
|
lineage4
|
None
|
SRR28393394
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13276346
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081755
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15315823
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR8773558
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR4024541
|
HR-TB
|
lineage4
|
None
|
SRR29539525
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4809319
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
ERR4812681
|
MDR-TB
|
lineage4
|
pe
|
ERR4812846
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4812987
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR3287445
|
MDR-TB
|
lineage4
|
pe
|
ERR3287644
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR4797563
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR5866483
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798184
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR25389451
|
HR-TB
|
lineage2.2.1
|
None
|
ERR1465793
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2516458
|
MDR-TB
|
lineage4
|
pe
|
SRR22528547
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR29385423
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3287696
|
MDR-TB
|
lineage4
|
pe
|
ERR2514909
|
HR-TB
|
lineage4.4.1.1
|
gb
|
SRR27069397
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751561
|
MDR-TB
|
lineage4.3.2
|
pe
|
ERR2512629
|
Sensitive
|
lineage3
|
gb
|
ERR7911326
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR8773556
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR10305734
|
HR-TB
|
lineage2.2.1
|
None
|
SRR28393954
|
MDR-TB
|
lineage4
|
None
|
ERR2984791
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4813512
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4819244
|
HR-TB
|
lineage1.2.1.2.1
|
gb
|
ERR4457819
|
HR-TB
|
lineage4
|
None
|
SRR16088462
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3287557
|
MDR-TB
|
lineage4
|
None
|
ERR4457811
|
MDR-TB
|
lineage4
|
None
|
ERR751540
|
MDR-TB
|
lineage4
|
pe
|
SRR12420529
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639795
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28394232
|
MDR-TB
|
lineage4
|
None
|
ERR10680047
|
MDR-TB
|
lineage1.1.1
|
None
|
ERR13260151
|
MDR-TB
|
lineage4
|
None
|
ERR9125111
|
HR-TB
|
lineage1.2.1.2.1
|
None
|
ERR4798914
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
SRR14782752
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR14782757
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2516414
|
MDR-TB
|
lineage4
|
pe
|
ERR4812818
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4813435
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR10869126
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR2075820
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR3742659
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6964642
|
MDR-TB
|
lineage3
|
None
|
SRR1368334
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22528542
|
MDR-TB
|
lineage2.2.1;lineage4.4.1.1
|
None
|
SRR22528545
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2184625
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR28393626
|
MDR-TB
|
lineage4
|
None
|
ERR13291207
|
HR-TB
|
lineage4.1.1.1
|
None
|
SAMEA3715558
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
SRR14782560
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR28393361
|
MDR-TB
|
lineage4
|
None
|
SRR28393911
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR28393265
|
MDR-TB
|
lineage4
|
None
|
SRR28394268
|
MDR-TB
|
lineage4
|
None
|
SRR28394070
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393551
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393349
|
MDR-TB
|
lineage4
|
None
|
SRR28393423
|
MDR-TB
|
lineage4
|
None
|
SRR1144768
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR751620
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR3287846
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR3287735
|
MDR-TB
|
lineage4
|
pe
|
SRR29772790
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR30182421
|
HR-TB
|
lineage3.1.2
|
None
|
SRR29539113
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3132100
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR3287505
|
MDR-TB
|
lineage4
|
None
|
ERR3287558
|
MDR-TB
|
lineage4
|
None
|
SRR1013559
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10341351
|
MDR-TB
|
lineage2.1;lineage2.2.1
|
None
|
SRR2075823
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28393529
|
MDR-TB
|
lineage4
|
None
|
SRR28394278
|
MDR-TB
|
lineage4
|
None
|
ERR13290462
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR4457792
|
HR-TB
|
lineage4
|
None
|
ERR4798187
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR2199762
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR11082310
|
MDR-TB
|
lineage4.1.2.1
|
None
|
DRR130091
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4457776
|
MDR-TB
|
lineage4
|
None
|
ERR1367634
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR29273968
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287443
|
MDR-TB
|
lineage4
|
pe
|
SRR28351331
|
RR-TB
|
lineage1.2.2.2
|
None
|
SRR21887777
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813603
|
MDR-TB
|
lineage4
|
None
|
SAMEA5569750
|
MDR-TB
|
lineage4
|
None
|
ERR1213856
|
HR-TB
|
lineage2.2.1
|
kr
|
ERR4025141
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4796797
|
HR-TB
|
lineage3.1.2
|
in
|
ERR2041750
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
ERR4797638
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2
|
in
|
ERR2307713
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16370523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4553810
|
MDR-TB
|
|
None
|
ERR1034755
|
MDR-TB
|
lineage4
|
pe
|
SRR6356936
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR775316
|
HR-TB
|
lineage4.3.2
|
pe
|
SRR22528541
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SAMEA5569642
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1368335
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24710169
|
MDR-TB
|
lineage2.2.1
|
None
|
DRR474011
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10828181
|
MDR-TB
|
lineage2.1;lineage2.2.1
|
None
|
ERR6865692
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR28394269
|
MDR-TB
|
lineage4
|
None
|
SRR29081572
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR16588743
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4819966
|
HR-TB
|
lineage3.1.2
|
gb
|
ERR13260512
|
MDR-TB
|
lineage4
|
None
|
ERR11050979
|
MDR-TB
|
lineage4.4
|
None
|
ERR11081605
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR751531
|
MDR-TB
|
lineage4
|
pe
|
SRR28858605
|
MDR-TB
|
lineage4
|
None
|
ERR4813333
|
MDR-TB
|
lineage4
|
None
|
ERR5979435
|
Pre-XDR-TB
|
lineage3.1
|
None
|
ERR4813465
|
HR-TB
|
lineage4
|
pe
|
ERR1034753
|
HR-TB
|
lineage4.1.2
|
pe
|
SRR1013560
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR13260390
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR2075817
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR25389519
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751411
|
MDR-TB
|
lineage4
|
pe
|
ERR4813549
|
MDR-TB
|
lineage4
|
None
|
ERR4813023
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4800424
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
ERR3287721
|
MDR-TB
|
lineage4
|
pe
|
ERR10680120
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28394212
|
MDR-TB
|
lineage4
|
None
|
ERR4813099
|
Pre-XDR-TB
|
lineage2.2.1
|
pe
|
SRR7069818
|
Sensitive
|
lineage3
|
None
|
ERR11773825
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR12118063
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4797739
|
Pre-XDR-TB
|
lineage3.1
|
in
|
ERR7910890
|
MDR-TB
|
lineage4
|
None
|
SRR3742670
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751447
|
MDR-TB
|
lineage4
|
pe
|
ERR751630
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR12420762
|
HR-TB
|
lineage2.2.1
|
None
|
ERR117618
|
Pre-XDR-TB
|
lineage1.1.1
|
None
|
ERR2516521
|
MDR-TB
|
lineage4
|
nl
|
SRR28394254
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4819237
|
HR-TB
|
lineage4.3.4.2
|
gb
|
SRR6280289
|
HR-TB
|
lineage2.2.1
|
cn
|
SRR6280174
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR22528585
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3287441
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR16089549
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1368341
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR3639722
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR3742655
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1368338
|
XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360559
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR2513838
|
Sensitive
|
lineage3
|
gb
|
ERR047880
|
MDR-TB
|
lineage1.1.1
|
ru
|
SRR1368337
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR3287360
|
MDR-TB
|
lineage4
|
pe
|
SRR10040368
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR12420637
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7339051
|
MDR-TB
|
lineage4
|
None
|
ERR4812772
|
MDR-TB
|
lineage4
|
pe
|
SRR3742658
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22528529
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR22528530
|
MDR-TB
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
ERR4025041
|
MDR-TB
|
lineage4
|
None
|
SRR28394044
|
MDR-TB
|
lineage4
|
None
|
SRR28046106
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28393572
|
MDR-TB
|
lineage4
|
None
|
ERR12118009
|
MDR-TB
|
lineage4
|
None
|
SRR25389520
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866122
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR7910889
|
MDR-TB
|
lineage4
|
None
|
SRR3742661
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR28394078
|
MDR-TB
|
lineage4
|
None
|
SRR14782156
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29681233
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29772797
|
Pre-XDR-TB
|
lineage4.3
|
None
|
ERR2503374
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12882492
|
HR-TB
|
lineage1.1.1
|
None
|
ERR3132085
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13290463
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR4799165
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR3639758
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773769
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28394009
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4553700
|
MDR-TB
|
|
None
|
SRR28394271
|
Pre-XDR-TB
|
lineage4
|
None
|
ERR3287473
|
HR-TB
|
lineage4
|
pe
|
ERR13284159
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29539523
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11138646
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14801923
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2510565
|
MDR-TB
|
lineage3
|
None
|
SRR3742660
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR29539400
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6865772
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR3287536
|
MDR-TB
|
lineage4
|
None
|
SRR28385876
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1368333
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4821237
|
HR-TB
|
lineage4.3.4.2
|
gb
|
SRR9738529
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR11252440
|
HR-TB
|
lineage1.1.3.2
|
None
|
ERR751356
|
MDR-TB
|
lineage4
|
pe
|
SRR2075822
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR28393378
|
MDR-TB
|
lineage4
|
None
|
SRR28393689
|
MDR-TB
|
lineage4
|
None
|
ERR11811441
|
HR-TB
|
lineage1.1.3.2
|
None
|
SRR13870364
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR25389452
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29274202
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2516678
|
MDR-TB
|
lineage4
|
pe
|
ERR3287597
|
MDR-TB
|
lineage4
|
pe
|
ERR4809156
|
MDR-TB
|
lineage4.3.2.1
|
za
|
SAMEA5569751
|
MDR-TB
|
lineage4
|
None
|
ERR4553807
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR6256995
|
HR-TB
|
lineage4.2.1.1
|
None
|
ERR13232479
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7517714
|
MDR-TB
|
lineage4.2.2.1
|
ch
|
ERR13267042
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081398
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR29274155
|
XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4800303
|
Pre-XDR-TB
|
lineage4.1.2.1
|
in
|
SRR2100331
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR4812883
|
MDR-TB
|
lineage4.9
|
pe
|
ERR13284322
|
MDR-TB
|
lineage4
|
None
|
ERR4811935
|
HR-TB
|
lineage4
|
pe
|
ERR2516509
|
MDR-TB
|
lineage4
|
pe
|
ERR13289056
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR28393318
|
MDR-TB
|
lineage4
|
None
|
SRR29274129
|
XDR-TB
|
lineage4.1.2.1
|
None
|
ERR775321
|
MDR-TB
|
lineage4
|
pe
|
ERR13291122
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1048858
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10828180
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR751488
|
MDR-TB
|
lineage4
|
pe
|
ERR6358868
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR2510175
|
MDR-TB
|
lineage4
|
pe
|
SRR22528528
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1163300
|
MDR-TB
|
lineage4
|
None
|
ERR751414
|
MDR-TB
|
lineage4
|
None
|
SRR5065701
|
HR-TB
|
lineage4.1.2.1
|
vn
|
SRR22528548
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR3287864
|
MDR-TB
|
lineage4
|
pe
|
ERR2041757
|
MDR-TB
|
lineage4.1.2.1
|
rs
|
SRR28393721
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR25207134
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9029844
|
MDR-TB
|
lineage4
|
None
|
SRR2024961
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR7341672
|
MDR-TB
|
lineage4.1.2.1
|
ro
|
ERR3287660
|
HR-TB
|
lineage4.1.1
|
pe
|
SRR12882496
|
HR-TB
|
lineage1.1.1
|
None
|
DRR473694
|
Other
|
lineage2.2.1
|
None
|
ERR4178214
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13250071
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13290464
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR13291249
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR2510234
|
MDR-TB
|
lineage4
|
pe
|
SRR21576586
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10379888
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1368339
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR1163141
|
MDR-TB
|
lineage4
|
None
|
SRR6280281
|
HR-TB
|
lineage2.2.1
|
cn
|
ERR3794505
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21662805
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR12117938
|
MDR-TB
|
lineage4
|
None
|
SRR18002957
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4178215
|
HR-TB
|
lineage4
|
None
|
ERR4457805
|
MDR-TB
|
lineage4
|
None
|
ERR3287774
|
MDR-TB
|
lineage4.3.2
|
pe
|
SRR5709869
|
Pre-XDR-TB
|
lineage2.2.1
|
th
|
SRR22251625
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2307396
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4811872
|
HR-TB
|
lineage4
|
pe
|
ERR114483
|
MDR-TB
|
lineage3.1.2.1
|
None
|
ERR2516203
|
Pre-XDR-TB
|
lineage2.2.1
|
be
|
ERR779883
|
MDR-TB
|
lineage4
|
pe
|
SRR21887692
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21276934
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12420441
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10808879
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR2024955
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR11081388
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR29093357
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR3287449
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393997
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR7911646
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
SRR29017223
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4797898
|
XDR-TB
|
lineage2.2.1
|
in
|
SRR1048859
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR29539360
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4457843
|
MDR-TB
|
lineage4
|
None
|
ERR751465
|
MDR-TB
|
lineage4
|
pe
|
SRR29017111
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR1368340
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR551151
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR3743384
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR12117965
|
MDR-TB
|
lineage4
|
None
|
ERR4797564
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
SRR10076614
|
Sensitive
|
lineage4.9
|
None
|
SRR1144804
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR7339052
|
MDR-TB
|
lineage4
|
None
|
ERR3639820
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR22528544
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR16156704
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR3742656
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034737
|
MDR-TB
|
lineage4
|
pe
|
SRR1368336
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4024944
|
MDR-TB
|
lineage4
|
None
|
ERR4813306
|
MDR-TB
|
lineage4
|
pe
|
ERR2516472
|
MDR-TB
|
lineage4
|
pe
|
ERR4797674
|
XDR-TB
|
lineage2.2.1
|
in
|
ERR3287791
|
MDR-TB
|
lineage4
|
pe
|
ERR11138602
|
HR-TB
|
lineage2.2.2
|
None
|
ERR9029870
|
MDR-TB
|
lineage4
|
None
|
ERR047884
|
MDR-TB
|
lineage1.1.1
|
gb
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2516541
|
Pre-XDR-TB
|
lineage4
|
pe
|
ERR13260594
|
MDR-TB
|
lineage4
|
None
|
ERR4457861
|
MDR-TB
|
lineage4
|
None
|
SRR12420442
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR12115310
|
MDR-TB
|
lineage1.1.3.1
|
None
|
SRR28385882
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR551787
|
HR-TB
|
lineage4.1.2.1
|
de
|
SRR28393600
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR28393306
|
MDR-TB
|
lineage4
|
None
|
SRR7068957
|
Sensitive
|
lineage3
|
None
|
ERR751521
|
MDR-TB
|
lineage4
|
pe
|
ERR11811399
|
HR-TB
|
lineage1.1.3.2
|
None
|
ERR13290465
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR22528536
|
MDR-TB
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR29681330
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29772633
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29538998
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR30182878
|
Other
|
lineage2.2.1
|
None
|