lineage | Count |
---|---|
lineage4 | 56 |
lineage2.2.1 | 23 |
lineage4.1.1 | 1 |
lineage3 | 5 |
lineage4.6.1.1 | 2 |
lineage2.2.2 | 5 |
lineage3.1.2 | 3 |
lineage4.1.2 | 1 |
lineage4.1.2.1 | 12 |
lineage4.3.2 | 14 |
lineage3.1.2;lineage2.2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage3.1 | 2 |
lineage4.2.2.1 | 1 |
lineage4.4.1.1 | 10 |
lineage1.1.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.8 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 2 |
lineage2.2 | 1 |
lineage4.3.2.1 | 2 |
lineage4.3.4.2 | 2 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 149 |
ID | Drug resistance | Lineage | Country iso2 | ERR3287846 | XDR-TB | lineage4 | pe | ERR4798934 | MDR-TB | lineage2.2.1 | in | ERR3287473 | HR-TB | lineage4 | pe | ERR1034756 | HR-TB | lineage4 | pe | ERR3287660 | HR-TB | lineage4.1.1 | pe | ERR4813333 | MDR-TB | lineage4 | None | ERR2512629 | Sensitive | lineage3 | gb | ERR3287527 | MDR-TB | lineage4 | None | ERR6358869 | MDR-TB | lineage4.6.1.1 | None | SAMN02360559 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4813465 | HR-TB | lineage4 | pe | ERR4797854 | MDR-TB | lineage3.1.2 | in | ERR1034753 | HR-TB | lineage4.1.2 | pe | SRR5709891 | Pre-XDR-TB | lineage2.2.1 | th | ERR3287445 | MDR-TB | lineage4 | pe | SRR5065701 | HR-TB | lineage4.1.2.1 | vn | ERR751488 | MDR-TB | lineage4 | pe | ERR4813023 | MDR-TB | lineage4.3.2 | None | ERR4800424 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR751411 | MDR-TB | lineage4 | pe | ERR4797638 | Pre-XDR-TB | lineage3.1.2;lineage2.2.1 | in | ERR775316 | HR-TB | lineage4.3.2 | pe | ERR3287721 | MDR-TB | lineage4 | pe | ERR4796944 | Pre-XDR-TB | lineage2.2.1 | in | ERR4813306 | MDR-TB | lineage4 | pe | SRR7341672 | MDR-TB | lineage4.1.2.1 | ro | ERR779883 | MDR-TB | lineage4 | pe | SRR5709869 | Pre-XDR-TB | lineage2.2.1 | th | SRR2100331 | MDR-TB | lineage3.1.2.1 | None | ERR2516650 | XDR-TB | lineage4 | pe | ERR4811872 | HR-TB | lineage4 | pe | ERR551787 | HR-TB | lineage4.1.2.1 | de | ERR4798184 | Pre-XDR-TB | lineage3 | in | ERR6358868 | MDR-TB | lineage4.6.1.1 | None | ERR4797739 | Pre-XDR-TB | lineage3.1 | in | ERR4797563 | Pre-XDR-TB | lineage2.2.1 | in | SRR2024955 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751630 | MDR-TB | lineage4.3.2 | pe | ERR3287696 | MDR-TB | lineage4 | pe | SAMEA3715558 | MDR-TB | lineage4.1.2.1 | rs | ERR2516521 | MDR-TB | lineage4 | nl | SAMN02398708 | Pre-XDR-TB | lineage2.2.2 | kr | SRR6280289 | HR-TB | lineage2.2.1 | cn | ERR2516458 | MDR-TB | lineage4 | pe | ERR3287441 | MDR-TB | lineage4.3.2 | pe | ERR2516548 | MDR-TB | lineage4 | pe | SRR7517714 | MDR-TB | lineage4.2.2.1 | ch | SRR6280174 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797898 | Pre-XDR-TB | lineage2.2.1 | in | ERR2514909 | HR-TB | lineage4.4.1.1 | gb | ERR7911326 | MDR-TB | lineage2.2.1 | vn | ERR751465 | MDR-TB | lineage4 | pe | ERR2516503 | XDR-TB | lineage4 | pe | ERR7911646 | Pre-XDR-TB | lineage2.2.2 | za | ERR4798187 | Pre-XDR-TB | lineage2.2.1 | in | ERR3287360 | MDR-TB | lineage4 | pe | ERR047880 | MDR-TB | lineage1.1.1 | ru | ERR3287555 | MDR-TB | lineage4 | None | ERR4819244 | HR-TB | lineage1.2.1.2.1 | gb | ERR4812771 | Other | lineage2.2.1 | None | ERR4812772 | MDR-TB | lineage4 | pe | SRR671848 | MDR-TB | lineage2.2.1 | cn | ERR2510234 | MDR-TB | lineage4 | pe | ERR4797564 | Pre-XDR-TB | lineage2.2.1 | in | ERR3287597 | MDR-TB | lineage4 | pe | ERR2516203 | Pre-XDR-TB | lineage2.2.1 | be | ERR3287774 | MDR-TB | lineage4.3.2 | pe | ERR2184625 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR751356 | MDR-TB | lineage4 | pe | ERR4800303 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR751540 | MDR-TB | lineage4 | pe | ERR751521 | MDR-TB | lineage4 | pe | ERR3287791 | MDR-TB | lineage4 | pe | ERR751561 | MDR-TB | lineage4.3.2 | pe | ERR3287735 | MDR-TB | lineage4 | pe | ERR4799165 | Pre-XDR-TB | lineage3 | in | ERR2516472 | MDR-TB | lineage4 | pe | ERR2229397 | Sensitive | lineage4.8 | None | ERR2516678 | MDR-TB | lineage4 | pe | ERR2516414 | MDR-TB | lineage4 | pe | ERR1034737 | MDR-TB | lineage4 | pe | ERR4798914 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4812818 | MDR-TB | lineage4.3.2 | None | ERR4797674 | Pre-XDR-TB | lineage2.2.1 | in | ERR047884 | MDR-TB | lineage1.1.1 | gb | ERR1213865 | MDR-TB | lineage2.2.2 | kr | ERR4813435 | MDR-TB | lineage4.3.2 | pe | ERR2516541 | XDR-TB | lineage4 | pe | ERR4798912 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4813198 | Pre-XDR-TB | lineage4.3.2 | pe | ERR2503374 | Pre-XDR-TB | lineage2.2.1 | None | ERR751620 | XDR-TB | lineage4 | pe | ERR4796676 | HR-TB | lineage3.1 | in | SRR22528536 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR3287505 | MDR-TB | lineage4 | None | SRR22528529 | MDR-TB | lineage4.4.1.1 | None | SRR22528530 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR16088462 | Pre-XDR-TB | lineage2.2 | None | SRR22528528 | MDR-TB | lineage4.4.1.1 | None | SRR22528544 | MDR-TB | lineage4.4.1.1 | None | SRR22528541 | MDR-TB | lineage4.4.1.1 | None | SRR22528542 | MDR-TB | lineage4.4.1.1 | None | SRR22528547 | MDR-TB | lineage4.4.1.1 | None | SRR22528545 | MDR-TB | lineage4.4.1.1 | None | SRR22528548 | MDR-TB | lineage4.4.1.1 | None | ERR3287443 | MDR-TB | lineage4 | pe | ERR4796797 | HR-TB | lineage3.1.2 | in | SRR22528585 | MDR-TB | lineage4.4.1.1 | None | SRR23691432 | MDR-TB | lineage2.2.1 | None | ERR5918086 | HR-TB | lineage4.3.2.1 | za | ERR4809156 | MDR-TB | lineage4.3.2.1 | za | ERR751452 | XDR-TB | lineage4 | pe | ERR751526 | MDR-TB | lineage4 | pe | ERR4819237 | HR-TB | lineage4.3.4.2 | gb | ERR4812883 | MDR-TB | lineage4.9 | pe | ERR751478 | MDR-TB | lineage4 | pe | ERR3287644 | MDR-TB | lineage4.3.2 | pe | ERR4819966 | HR-TB | lineage3.1.2 | gb | SRR6280281 | HR-TB | lineage2.2.1 | cn | ERR4811935 | HR-TB | lineage4 | pe | ERR775321 | MDR-TB | lineage4 | pe | ERR4821237 | HR-TB | lineage4.3.4.2 | gb | ERR2516509 | MDR-TB | lineage4 | pe | ERR1213856 | HR-TB | lineage2.2.1 | kr | ERR4809319 | Pre-XDR-TB | lineage2.2.2 | za | ERR2041750 | MDR-TB | lineage4.1.2.1 | rs | ERR1034755 | MDR-TB | lineage4 | pe | ERR779923 | MDR-TB | lineage4 | pe | ERR2199763 | MDR-TB | lineage4.3.2 | de | ERR4812987 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813495 | HR-TB | lineage4 | None | ERR4812681 | MDR-TB | lineage4 | pe | ERR2510565 | MDR-TB | lineage3 | None | ERR751447 | MDR-TB | lineage4 | pe | ERR4811074 | HR-TB | lineage2.2.1 | cn | ERR3287536 | MDR-TB | lineage4 | None | ERR4813099 | Pre-XDR-TB | lineage2.2.1 | pe | ERR751414 | MDR-TB | lineage4 | None | ERR2510175 | MDR-TB | lineage4 | pe | ERR2510241 | HR-TB | lineage4.3.2 | pe | ERR3287864 | MDR-TB | lineage4 | pe | ERR4812485 | XDR-TB | lineage4 | pe | ERR4812060 | HR-TB | lineage4 | pe | ERR2513838 | Sensitive | lineage3 | gb | SRR2024961 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751531 | MDR-TB | lineage4 | pe | ERR2041757 | MDR-TB | lineage4.1.2.1 | rs | ERR4812846 | MDR-TB | lineage4.3.2 | None | ERR4813512 | MDR-TB | lineage4.3.2 | None |
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