lineage | Count |
---|---|
La3 | 204 |
lineage1.1.3.3 | 1 |
lineage4.3 | 11 |
lineage4.1.2.1 | 13 |
lineage1.1.2 | 9 |
lineage4.2.2 | 6 |
lineage4 | 4 |
lineage4.1.1.1 | 5 |
lineage2.2.1 | 4 |
lineage4.4.1.1 | 2 |
lineage4.3.3 | 8 |
lineage4.5 | 12 |
lineage4.7 | 1 |
lineage4.1.1 | 2 |
lineage4.3.1 | 1 |
lineage4.4.2 | 2 |
lineage4.6 | 1 |
lineage1.2.1.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.1.3 | 3 |
La3;lineage4.1.2 | 1 |
La1.8.1;La3 | 1 |
spoligotype | Count |
---|---|
None | 293 |
ID | Drug resistance | Lineage | Country iso2 | ERR6375115 | HR-TB | La3 | None | ERR2512533 | Other | La3 | gb | SRR6046235 | Other | La3 | gb | ERR4800242 | Other | La3 | in | ERR4800037 | Sensitive | lineage1.1.3.3 | in | ERR4821317 | Other | La3 | gb | ERR4799479 | Sensitive | La3 | in | ERR9125155 | Other | lineage4.3 | None | ERR7361915 | MDR-TB | lineage4.1.2.1 | None | SRR1172329 | HR-TB | lineage1.1.2 | None | SRR1180135 | HR-TB | lineage1.1.2 | None | ERR4822142 | Sensitive | La3 | None | SRR6153221 | Sensitive | lineage4.2.2 | ca | ERR13260581 | Pre-XDR-TB | lineage4 | None | ERR2653120 | MDR-TB | lineage4.1.1.1 | None | ERR11082243 | Sensitive | lineage2.2.1 | None | ERR13273105 | Sensitive | lineage4.4.1.1 | None | ERR1034834 | MDR-TB | lineage4.1.2.1 | pt | SRR27450483 | Sensitive | La3 | None | ERR11049793 | Sensitive | lineage4.1.2.1 | None | SRR28859928 | Sensitive | La3 | None | SRR29053502 | Sensitive | La3 | None | SRR27450025 | Sensitive | La3 | None | SRR14520038 | HR-TB | lineage4.3.3 | None | ERR13266060 | Sensitive | lineage1.1.2 | None | ERR11050312 | Sensitive | lineage4.1.2.1 | None | ERR4815064 | Other | La3 | gb | SRR16058599 | Other | La3 | None | SRR27450484 | Sensitive | La3 | None | SRR27450479 | Other | La3 | None | SRR7070371 | Other | La3 | None | SRR5642716 | Sensitive | La3 | None | ERR11068278 | Other | La3 | None | SRR1183011 | HR-TB | lineage1.1.2 | None | ERR13284010 | Sensitive | lineage4.5 | None | SRR10251190 | Sensitive | La3 | None | SRR22048363 | Other | La3 | None | SRR2101161 | Other | La3 | None | ERR11050970 | Sensitive | La3 | None | ERR6375141 | Sensitive | La3 | None | SRR10251186 | Other | La3 | None | SRR21279467 | Other | lineage2.2.1 | None | ERR4814915 | Other | La3 | None | ERR11049303 | Sensitive | La3 | None | ERR4798322 | Sensitive | La3 | in | ERR6375134 | Other | La3 | None | SRR28858579 | Sensitive | La3 | None | SRR27450393 | Other | La3 | None | ERR2512859 | Sensitive | La3 | gb | SRR29053539 | Sensitive | lineage4.3 | None | SRR16057982 | Sensitive | La3 | None | ERR6375133 | Other | La3 | None | SRR10321128 | Other | La3 | None | SRR6824480 | MDR-TB | lineage4.2.2 | cn | ERR6375131 | Sensitive | La3 | None | SRR6046131 | Other | La3 | None | SRR15316002 | HR-TB | lineage4.5 | None | ERR11082770 | Sensitive | lineage4.4.1.1 | None | ERR6375118 | Other | La3 | None | ERR6375123 | Sensitive | La3 | None | ERR6375137 | Sensitive | La3 | None | SRR16058605 | Sensitive | La3 | None | SRR6045301 | Other | La3 | gb | SRR27450022 | Sensitive | La3 | None | SRR1735569 | Sensitive | La3 | None | ERR9121359 | Sensitive | lineage4.1.2.1 | None | SRR29055734 | Sensitive | lineage4.1.2.1 | None | SRR16089410 | Other | La3 | None | SRR10251188 | Other | La3 | None | ERR11050926 | Sensitive | lineage4.7 | None | ERR2517593 | Other | La3 | nl | ERR2659156 | Other | La3 | None | ERR234682 | Other | La3 | None | SRR18495627 | Sensitive | lineage4.5 | None | SRR10808736 | HR-TB | lineage4.3.3 | None | ERR4821802 | Sensitive | La3 | gb | ERR4820932 | Other | La3 | gb | ERR2513671 | Other | La3 | gb | SRR6045015 | Other | La3 | gb | ERR4799643 | Other | La3 | in | ERR9125109 | Sensitive | La3 | None | ERR6865319 | HR-TB | lineage4.1.1 | None | SRR5642718 | Sensitive | La3 | None | SRR16057940 | Sensitive | La3 | None | SRR7069626 | Sensitive | La3 | None | ERR11049411 | Sensitive | La3 | None | SRR3675498 | Sensitive | La3 | gb | SRR29052772 | Sensitive | La3 | None | ERR4813974 | HR-TB | lineage4.1.2.1 | None | ERR6375116 | HR-TB | La3 | None | SRR29056019 | Other | La3 | None | SRR28351652 | Sensitive | La3 | None | ERR2512826 | Sensitive | La3 | None | SRR16370463 | Sensitive | lineage4.3 | None | ERR330708 | Sensitive | lineage4.2.2 | None | SRR21710734 | Sensitive | lineage4.3 | None | ERR4817778 | Sensitive | La3 | gb | ERR4820194 | Sensitive | La3 | None | ERR2199741 | Sensitive | La3 | de | SRR29053271 | Sensitive | La3 | None | SRR6045604 | Sensitive | La3 | None | SRR6045810 | Sensitive | lineage4.1.1.1 | gb | ERR9125596 | Sensitive | La3 | None | SRR10040465 | Pre-XDR-TB | lineage4.5 | None | SRR10251192 | Sensitive | La3 | None | SRR27450590 | Sensitive | lineage4.5 | None | ERR553015 | Sensitive | lineage4.3.1 | None | ERR4815329 | Sensitive | lineage4.1.1.1 | gb | ERR4820312 | Sensitive | La3 | None | ERR6375129 | Other | La3 | None | ERR4817463 | Other | La3 | gb | SRR10321149 | Sensitive | La3 | None | ERR6375119 | Sensitive | La3 | None | SRR20969777 | MDR-TB | lineage4.2.2 | None | SRR14782149 | Sensitive | lineage4.3.3 | None | ERR4799735 | Other | La3 | in | ERR11050692 | Other | La3 | None | ERR6375135 | Other | La3 | None | ERR13290842 | Sensitive | lineage4.4.2 | None | ERR4816913 | Sensitive | lineage4.6 | gb | SRR16058583 | Other | La3 | None | ERR6375117 | Other | La3 | None | ERR4796515 | Other | La3 | in | SRR7069844 | Sensitive | La3 | None | ERR13291622 | Sensitive | lineage4.3 | None | DRR188941 | Sensitive | lineage1.2.1.2.1 | None | SRR29053033 | Sensitive | La3 | None | ERR4814716 | Sensitive | La3 | None | ERR4815024 | Sensitive | La3 | None | SRR1166325 | MDR-TB | lineage4.3.3 | ro | SRR28859592 | Sensitive | lineage4.3.3 | None | ERR4829235 | Other | La3 | None | ERR4818160 | Sensitive | La3 | gb | ERR11050813 | Sensitive | lineage1.1.2 | None | SRR27450477 | Other | La3 | None | ERR2514172 | Sensitive | La3 | gb | SRR7131127 | Other | La3 | None | ERR6375136 | Sensitive | La3 | None | SRR16089402 | Other | La3 | None | SRR27450611 | Other | La3 | None | SRR21686594 | Sensitive | lineage4.3 | None | SRR18911232 | Sensitive | lineage1.2.2.2 | None | SRR21674637 | Sensitive | lineage4.1.2.1 | None | ERR4800046 | Sensitive | La3 | in | SRR28858716 | Sensitive | La3 | None | ERR13292244 | Sensitive | lineage4.1.1.3 | None | ERR2512788 | Sensitive | La3 | None | ERR228223 | Sensitive | La3 | None | ERR3077981 | Sensitive | lineage1.1.2 | None | SRR10251195 | Sensitive | La3 | None | SRR10251202 | Sensitive | La3 | None | ERR6375124 | Other | La3 | None | SRR16058087 | Other | lineage4.3 | None | SRR28923836 | Pre-XDR-TB | lineage2.2.1 | None | ERR6375126 | Other | La3 | None | ERR11067404 | Sensitive | La3 | None | SRR27069393 | MDR-TB | lineage4.5 | None | SRR6046725 | Other | La3 | gb | ERR11043390 | Sensitive | La3 | None | SRR10251191 | Other | La3 | None | ERR9125663 | Other | La3 | None | ERR11081198 | Other | La3 | None | ERR4821658 | Other | La3 | None | ERR9125148 | Sensitive | La3 | None | ERR4024805 | HR-TB | lineage4.1.1 | None | SRR5642717 | Other | La3 | None | SRR27450292 | Sensitive | lineage4.5 | None | ERR13290071 | Sensitive | La3 | None | ERR6375120 | Sensitive | La3 | None | ERR11049107 | Other | La3 | None | ERR11049551 | Sensitive | La3 | None | SRR27450596 | Sensitive | La3 | None | SRR10251194 | Other | La3 | None | SRR5642714 | Sensitive | La3 | None | SRR2101291 | Other | La3 | None | SRR5642712 | Other | La3 | None | SRR15316507 | Sensitive | lineage4.5 | None | ERR9125525 | Other | La3 | None | SRR2101329 | Sensitive | La3 | None | ERR2516585 | Sensitive | lineage4.1.2.1 | pe | SRR20969567 | Sensitive | lineage4.2.2 | None | ERR2513625 | Other | La3 | gb | ERR6375139 | Other | La3 | None | ERR4819164 | Other | La3 | None | ERR11067940 | Sensitive | La3 | None | SRR29052939 | Sensitive | La3 | None | ERR234675 | Sensitive | La3 | None | ERR2517102 | Sensitive | La3 | gb | ERR294241 | Other | La3 | None | ERR6375142 | Sensitive | La3 | None | SRR2101146 | Sensitive | lineage4.2.2 | None | SRR27069368 | MDR-TB | lineage4.5 | None | ERR6375138 | Other | La3 | None | ERR4817427 | Other | La3 | None | ERR13261697 | MDR-TB | lineage4 | None | SRR27450480 | Other | La3 | None | ERR4798030 | XDR-TB | lineage1.1.2 | in | SRR28858676 | Sensitive | La3 | None | ERR6375121 | Other | La3 | None | ERR4796505 | Sensitive | La3 | in | ERR4820516 | Sensitive | La3 | None | SRR2100577 | Other | La3 | None | SRR16370464 | Sensitive | lineage4.3 | None | SRR2101222 | Sensitive | La3 | None | SRR28409674 | Other | La3 | None | ERR4821662 | Other | La3 | gb | SRR10321130 | Sensitive | La3 | None | ERR13292080 | Sensitive | lineage4.3 | None | ERR4820543 | Other | La3 | None | SRR10251189 | Sensitive | La3 | None | SRR10251196 | Sensitive | La3 | None | ERR11049614 | Sensitive | La3;lineage4.1.2 | None | SRR10251199 | Sensitive | La3 | None | SRR6044939 | Sensitive | La3 | gb | ERR4799118 | Sensitive | La3 | in | ERR6375122 | Sensitive | La3 | None | ERR234676 | Sensitive | La3 | None | ERR9125087 | Sensitive | La3 | None | ERR2512942 | Sensitive | La3 | None | SRR18715348 | Sensitive | lineage4.1.2.1 | None | ERR13289622 | Sensitive | lineage4.1.1.1 | None | ERR6375125 | Sensitive | La3 | None | ERR4818708 | Sensitive | La3 | None | ERR4816917 | Other | La3 | gb | SRR5642711 | Other | La3 | None | SRR10321143 | Other | La3 | None | SRR5642715 | Other | La3 | None | ERR2514578 | Sensitive | La3 | gb | ERR9125828 | Sensitive | La3 | None | SRR6045425 | Sensitive | La3 | gb | SRR16058093 | Sensitive | La3 | None | SRR10251193 | Other | La3 | None | ERR13262070 | Sensitive | La3 | None | SRR10321152 | Sensitive | La3 | None | ERR2659153 | Other | La3 | None | ERR2512389 | Other | La3 | gb | SRR10251187 | Sensitive | La3 | None | SRR10040338 | MDR-TB | lineage4.4.2 | None | ERR2515051 | Other | La3 | None | ERR6375127 | Other | La3 | None | ERR4815417 | Other | La3 | gb | SRR6480634 | HR-TB | lineage4.3.3 | None | ERR4819952 | Other | La3 | None | SRR27450478 | Other | La3 | None | SRR10251198 | Sensitive | La3 | None | ERR351884 | Other | La3 | None | SRR16089392 | Other | La3 | None | SRR10251197 | Sensitive | La3 | None | ERR4818572 | Other | La3 | None | SRR12882663 | Sensitive | lineage1.1.2 | None | SRR5642713 | Other | La3 | None | SRR16089393 | Other | La3 | None | SRR10321134 | Other | La3 | None | SRR18912072 | Sensitive | lineage4.1.1.3 | None | ERR11067403 | Sensitive | La3 | None | ERR1555051 | MDR-TB | lineage4.1.1.1 | None | ERR2199829 | Other | La3 | de | ERR2179862 | Sensitive | lineage4.5 | cn | ERR4830895 | Sensitive | lineage4.3 | None | ERR6375128 | Other | La3 | None | SRR6046695 | Other | La3 | gb | SRR10251200 | Sensitive | La3 | None | ERR11069001 | Sensitive | lineage4.1.2.1 | None | ERR2659154 | Sensitive | La3 | None | SRR6045962 | Sensitive | La3 | gb | ERR13249809 | Sensitive | lineage4.5 | None | ERR6375140 | Other | La3 | None | SRR10251185 | Other | La3 | None | SRR29051189 | Sensitive | lineage4.3 | None | SRR10808987 | Sensitive | lineage4.3.3 | None | ERR13260593 | Pre-XDR-TB | lineage4 | None | ERR4822262 | Sensitive | La1.8.1;La3 | None | ERR4820063 | Sensitive | La3 | None | SRR7070245 | Other | La3 | None | ERR4195780 | Sensitive | lineage4.1.2.1 | None | ERR11050836 | Sensitive | La3 | None | ERR2514957 | Sensitive | La3 | gb | SRR21728710 | Other | lineage4.1.1.3 | None | SAMN02599019 | HR-TB | lineage1.1.2 | in | SRR16058369 | Other | La3 | None | ERR752180 | Sensitive | lineage2.2.1 | th | SRR27450188 | Other | La3 | None | ERR11067178 | Other | La3 | None | SRR6896301 | Sensitive | lineage4.3.3 | None | ERR2659155 | Sensitive | La3 | None | ERR4821950 | Other | La3 | None | ERR4810569 | Sensitive | lineage4.5 | cn | ERR2510692 | MDR-TB | lineage4 | it | ERR4817328 | Sensitive | La3 | None | ERR6375130 | Other | La3 | None | ERR6751578 | MDR-TB | lineage4.1.2.1 | None | SRR10321141 | Sensitive | La3 | None | SRR28351414 | Other | La3 | None |
---|