lineage | Count |
---|---|
lineage4.1.1.3 | 1 |
lineage3 | 9 |
lineage1.1.2 | 1 |
lineage2.2.1 | 20 |
lineage4.8 | 4 |
lineage1.2.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.2 | 1 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR10869227 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR15014607 | MDR-TB | lineage3 | None | SRR15014631 | MDR-TB | lineage1.1.2 | None | SRR15364430 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303951 | Sensitive | lineage4.8 | None | SRR15722989 | Other | lineage2.2.1 | None | SRR15723097 | Other | lineage2.2.1 | None | SRR16089907 | Sensitive | lineage1.2.1.2.1 | None | SRR16156676 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4813100 | Pre-XDR-TB | lineage2.2.1 | pe | SRR22424777 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067930 | Sensitive | lineage4.8 | None | ERR5758364 | Pre-XDR-TB | lineage2.2.2 | None | SRR2100294 | MDR-TB | lineage3 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | ERR11067929 | Sensitive | lineage4.8 | None | ERR015616 | Pre-XDR-TB | lineage2.2.1 | ru | ERR227986 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR8380875 | MDR-TB | lineage3 | in | SRR8380890 | Pre-XDR-TB | lineage3 | in | ERR4818027 | Other | lineage4.8 | None | ERR2512821 | MDR-TB | lineage3 | gb | ERR4830944 | Pre-XDR-TB | lineage2.2.1 | np | SRR1723842 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2517067 | MDR-TB | lineage3 | gb | ERR2516996 | MDR-TB | lineage3 | gb | ERR4830658 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830886 | MDR-TB | lineage3 | None | SRR6824463 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6848323 | Pre-XDR-TB | lineage4.1.2.1.1 | None | SRR7341672 | MDR-TB | lineage4.1.2.1 | ro | DRR130069 | Pre-XDR-TB | lineage2.2.1 | None | DRR130178 | Pre-XDR-TB | lineage2.2.1 | None | ERR019562 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797148 | Pre-XDR-TB | lineage2.2.1 | in | ERR067752 | Pre-XDR-TB | lineage4.2.1 | ru | ERR114445 | MDR-TB | lineage3 | None | ERR3639711 | MDR-TB | lineage2.2.1 | None | ERR11049565 | Pre-XDR-TB | lineage2.2.1 | None | SRR10305620 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049829 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162982 | MDR-TB | lineage2.2.1 | None |
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