lineage | Count |
---|---|
lineage2.2.1 | 39 |
lineage4.5 | 14 |
lineage2.2.2 | 4 |
lineage3 | 4 |
lineage4.2.2 | 5 |
lineage4.8 | 2 |
lineage4.4.2 | 2 |
lineage3.1.3 | 2 |
lineage2.2.1.1 | 5 |
lineage4.1.1.3 | 2 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | SRR1723537 | HR-TB | lineage2.2.1 | cn | ERR2179572 | Sensitive | lineage4.5 | cn | SRR1723863 | Sensitive | lineage2.2.1 | cn | SRR1723422 | Other | lineage2.2.2 | cn | ERR2179605 | Sensitive | lineage4.5 | cn | SAMN03246213 | MDR-TB | lineage2.2.1 | cn | ERR2179594 | Sensitive | lineage4.5 | cn | SAMN03246263 | MDR-TB | lineage2.2.1 | cn | ERR2179681 | MDR-TB | lineage3 | cn | ERR2179671 | MDR-TB | lineage4.2.2 | cn | SAMN03246458 | MDR-TB | lineage2.2.1 | cn | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2179609 | Sensitive | lineage4.8 | cn | SRR1724001 | Sensitive | lineage4.2.2 | cn | ERR2179676 | MDR-TB | lineage4.5 | cn | ERR2179622 | Sensitive | lineage4.4.2 | cn | SRR1723411 | MDR-TB | lineage3 | cn | SRR1723915 | Sensitive | lineage4.5 | cn | SRR1723424 | HR-TB | lineage2.2.2 | cn | SRR1723518 | Sensitive | lineage2.2.1 | cn | ERR2179615 | Sensitive | lineage3.1.3 | cn | SAMN03246215 | MDR-TB | lineage2.2.1 | cn | ERR2179635 | HR-TB | lineage4.5 | cn | SRR1723704 | Other | lineage2.2.1.1 | cn | SRR1723781 | Sensitive | lineage2.2.1 | cn | SRR1723581 | Sensitive | lineage2.2.1 | cn | SAMN03246416 | MDR-TB | lineage2.2.1.1 | cn | SRR1723903 | Sensitive | lineage4.5 | cn | SAMN03246534 | MDR-TB | lineage2.2.1 | cn | ERR2179670 | MDR-TB | lineage4.2.2 | cn | SRR1724009 | MDR-TB | lineage4.2.2 | cn | SRR1723772 | Sensitive | lineage2.2.1 | cn | ERR2179611 | Sensitive | lineage4.5 | cn | SRR1723879 | HR-TB | lineage2.2.1 | cn | SRR1723653 | Sensitive | lineage2.2.1 | cn | SRR1724011 | MDR-TB | lineage4.2.2 | cn | SRR1723887 | HR-TB | lineage2.2.1 | cn | SRR1723430 | MDR-TB | lineage2.2.2 | cn | ERR2179682 | MDR-TB | lineage3 | None | SRR1723521 | HR-TB | lineage2.2.1 | cn | SRR1723527 | Sensitive | lineage2.2.1 | cn | SRR1723792 | MDR-TB | lineage2.2.1 | cn | SRR1723828 | RR-TB | lineage2.2.1 | cn | SRR1723830 | Sensitive | lineage2.2.1 | cn | SRR1723876 | RR-TB | lineage2.2.1 | None | SRR1723638 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723457 | MDR-TB | lineage2.2.1 | cn | SRR1723783 | RR-TB | lineage2.2.1 | None | SRR1723955 | MDR-TB | lineage4.5 | cn | SRR1723885 | HR-TB | lineage2.2.1 | cn | SAMN03246408 | MDR-TB | lineage2.2.1 | cn | SRR1723698_SRR1723699 | RR-TB | lineage2.2.1.1 | None | ERR2179659 | MDR-TB | lineage4.5 | None | SRR1724014 | HR-TB | lineage4.1.1.3 | cn | SRR1723817 | Sensitive | lineage2.2.1 | cn | SAMN03246362 | RR-TB | lineage2.2.1 | cn | SRR1723613 | Other | lineage2.2.1 | None | SRR1723462 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723409 | Sensitive | lineage3.1.3 | cn | ERR1198987 | Sensitive | lineage4.6.1.1 | None | SRR1723905_SRR1723904 | MDR-TB | lineage4.5 | None | SRR1723693_SRR1723694 | RR-TB | lineage2.2.1.1 | None | SRR1723601 | MDR-TB | lineage2.2.1 | cn | SRR1723528 | Sensitive | lineage2.2.1 | cn | ERR2179621 | HR-TB | lineage4.1.1.3 | cn | SRR1723967 | Sensitive | lineage4.4.2 | cn | SRR1723700 | Sensitive | lineage2.2.1.1 | cn | SRR1723961 | Sensitive | lineage4.8 | cn | SRR1723943 | Sensitive | lineage4.5 | cn | SRR1723643 | HR-TB | lineage2.2.1 | cn | SRR1723798 | MDR-TB | lineage2.2.1 | cn | SRR1723658 | MDR-TB | lineage2.2.1 | cn | SAMN03246590 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723878 | Sensitive | lineage2.2.1 | cn | SRR1723413_SRR1723412 | MDR-TB | lineage3 | None | SAMN03246276 | MDR-TB | lineage2.2.1 | cn | SRR1723428 | Sensitive | lineage2.2.2 | cn | ERR2179560 | Sensitive | lineage4.5 | cn | SRR1723800 | HR-TB | lineage2.2.1 | cn | SRR1723913 | HR-TB | lineage4.5 | cn |
---|