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SRA data
Rv2780
- c.1025dupG
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.4.2.1
3
lineage4.3.4.2
2
lineage2.2.1;lineage3
1
lineage4.4.1.1.1
1
lineage4.3.3
1
lineage2.2.1
1
lineage4.1.2.1
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
10
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11488671
Pre-XDR-TB
lineage4.3.4.2.1
None
ERR11488724
Pre-XDR-TB
lineage4.3.4.2.1
None
ERR11488728
Pre-XDR-TB
lineage4.3.4.2.1
None
ERR13260410
Pre-XDR-TB
lineage4.1.2.1
None
ERR3287312
Pre-XDR-TB
lineage4.3.4.2
pe
ERR4797921
Pre-XDR-TB
lineage2.2.1
in
ERR751593
Pre-XDR-TB
lineage4.3.4.2
pe
ERR8975724
XDR-TB
lineage4.4.1.1.1
None
SRR13870407
Pre-XDR-TB
lineage4.3.3
None
SRR25827633
Pre-XDR-TB
lineage2.2.1;lineage3
None
Showing 1 to 10 of 10 entries
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