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SRA data
Rv2780
- c.128_129dupCG
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
15 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
14
lineage4.2.1
3
lineage4.8
2
lineage1.1.1
1
lineage4.3.3
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13290434
MDR-TB
lineage2.2.1
None
ERR13290435
MDR-TB
lineage2.2.1
None
ERR13290436
MDR-TB
lineage2.2.1
None
ERR13290437
MDR-TB
lineage2.2.1
None
SAMN02414914
MDR-TB
lineage2.2.1
se
SAMN02414915
MDR-TB
lineage2.2.1
se
SRR1144743
MDR-TB
lineage2.2.1
None
SRR1144778
MDR-TB
lineage2.2.1
None
SRR1146316
MDR-TB
lineage2.2.1
None
SRR1146372
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 21 entries
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