Rv2780 - c.163_165delGCGinsCA
Drug resistance types
52 Sensitive
0 RR-TB
7 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 4 |
| lineage4.8 | 8 |
| lineage4.1.2.1 | 33 |
| lineage5.3 | 3 |
| lineage1.1.1.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage5.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.1.2 | 1 |
| lineage1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2101668 | Sensitive | lineage4.1.1.3 | None | ERR4195811 | HR-TB | lineage4.8 | None | ERR550971 | Sensitive | lineage4.1.2.1 | None | ERR1023221 | Sensitive | lineage5.3 | None | ERR1465966 | Sensitive | lineage4.8 | None | ERR11082072 | Sensitive | lineage4.1.2.1 | None | SRR23316638 | HR-TB | lineage1.1.1.1 | None | ERR4796733 | Pre-XDR-TB | lineage4.1.1.3 | in | ERR553267 | Sensitive | lineage1.1.1.1 | de | ERR552736 | Sensitive | lineage4.1.2.1 | None | SAMEA2533662 | Sensitive | lineage4.1.2.1 | de | ERR4811895 | Sensitive | lineage4.1.2.1 | pe | SAMEA2534361 | Sensitive | lineage4.1.2.1 | de | ERR550888 | Sensitive | lineage4.1.2.1 | None | ERR2200104 | Sensitive | lineage4.1.2.1 | None | ERR11049287 | Sensitive | lineage4.1.2.1 | None | ERR550704 | Sensitive | lineage4.1.2.1 | None | ERR552339 | Sensitive | lineage4.1.2.1 | None | ERR11043026 | Sensitive | lineage4.1.2.1 | None | SAMEA2533995 | Sensitive | lineage4.1.2.1 | de | SRR6397512 | Sensitive | lineage4.1.2.1 | ca | ERR552881 | Sensitive | lineage4.1.2.1 | de | SAMEA2534266 | Sensitive | lineage4.1.2.1 | de | ERR551766 | Sensitive | lineage4.1.2.1 | None | ERR552275 | Sensitive | lineage4.1.2.1 | None | ERR9121409 | HR-TB | lineage4.8 | None | ERR502512 | Sensitive | lineage5.3 | gh | SRR22251448 | HR-TB | lineage4.1.1.3 | None | SRR6981910 | Sensitive | lineage4.1.1.3 | None | ERR553111 | Sensitive | lineage4.1.2.1 | None | SRR12882274 | Sensitive | lineage1.2.2.2 | None | ERR4162027 | Sensitive | lineage5.1.1 | None | SRR5818582 | Sensitive | lineage1.1.3.1 | dj | ERR552942 | Sensitive | lineage4.1.2.1 | de | ERR11049521 | Sensitive | lineage4.1.2.1 | None | ERR551518 | Sensitive | lineage4.1.2.1 | None | SRR28044792 | HR-TB | lineage1.1.2 | None | SRR29440609 | Sensitive | lineage1.1 | None | ERR553280 | Sensitive | lineage4.1.2.1 | None | ERR11044131 | Sensitive | lineage4.1.2.1 | None | ERR1023222 | Sensitive | lineage5.3 | None | SRR21732246 | Sensitive | lineage1.1.3.1 | None | SAMEA2533532 | Sensitive | lineage4.1.2.1 | de | ERR2200144 | Sensitive | lineage4.1.2.1 | de | ERR1465837_ERR1465966 | Sensitive | lineage4.8 | None | ERR8686177 | Sensitive | lineage4.3.2.1 | None | SRR6964612 | MDR-TB | lineage3 | None | ERR11049529 | Sensitive | lineage4.1.2.1 | None | ERR551507 | Sensitive | lineage4.1.2.1 | None | ERR4829566 | Sensitive | lineage4.8 | it | SRR24799255 | Sensitive | lineage1.2.2.2 | None | SRR3675569 | Sensitive | lineage4.1.2.1 | None | SAMEA2533782 | Sensitive | lineage4.1.2.1 | de | ERR9121356 | HR-TB | lineage4.8 | None | SRR13583320 | MDR-TB | lineage4.3.3 | None | ERR551517 | Sensitive | lineage4.1.2.1 | None | ERR551326 | Sensitive | lineage4.1.2.1 | None | ERR2179689 | Sensitive | lineage4.5 | cn | ERR551765 | Sensitive | lineage4.1.2.1 | None | ERR768013 | Sensitive | lineage1.1.1.1 | th | SAMEA4041324 | Sensitive | lineage4.8 | None | ERR4195368 | HR-TB | lineage4.8 | None |
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