Rv2780 - c.163_165delGCGinsCA


Drug resistance types
114 Sensitive 0 RR-TB 10 HR-TB 5 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 2 Other
lineage Counts
lineage Count
lineage4.1.2.1 73
lineage2.2.1;lineage4.1.2.1 1
lineage4.3.3 1
lineage4.8 15
lineage4.2.1.1 1
lineage1.1.2 4
lineage4.5 2
lineage1.1.1.1 8
lineage1.2.2.2 7
lineage4.9.1 1
lineage5.3 3
lineage1.1.3.1 5
lineage5.1.1 2
lineage2.2.1 3
lineage4.3.2.1 1
lineage3 1
lineage4.1.1.3 5
spoligotype Counts
spoligotype Count
None 133
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675258 Sensitive lineage4.1.2.1 None
ERR550996 Sensitive lineage2.2.1;lineage4.1.2.1 None
ERR550704 Sensitive lineage4.1.2.1 None
ERR552339 Sensitive lineage4.1.2.1 None
SAMEA2533483 Sensitive lineage4.1.2.1 de
ERR552381 Sensitive lineage4.1.2.1 None
SRR13583320 MDR-TB lineage4.3.3 None
ERR551517 Sensitive lineage4.1.2.1 None
ERR551217 Sensitive lineage4.1.2.1 None
ERR551326 Sensitive lineage4.1.2.1 None
ERR11068174 Sensitive lineage4.1.2.1 None
SRR6832118 Sensitive lineage4.1.2.1 None
ERR552942 Sensitive lineage4.1.2.1 de
ERR552881 Sensitive lineage4.1.2.1 de
SRR5073700 HR-TB lineage4.8 vn
SRR28409441 Sensitive lineage4.2.1.1 None
SRR28044792 HR-TB lineage1.1.2 None
ERR2179689 Sensitive lineage4.5 cn
ERR552027 Sensitive lineage4.1.2.1 None
SRR3675483 Other lineage4.1.2.1 None
ERR551765 Sensitive lineage4.1.2.1 None
SRR3675271 Sensitive lineage4.1.2.1 gb
SRR11662605 MDR-TB lineage1.1.1.1 None
ERR4195368 HR-TB lineage4.8 None
SAMEA2533532 Sensitive lineage4.1.2.1 de
SRR14519652 Sensitive lineage1.2.2.2 None
SRR14520109 Sensitive lineage1.2.2.2 None
ERR4195811 HR-TB lineage4.8 None
ERR2200144 Sensitive lineage4.1.2.1 de
ERR552868 Sensitive lineage4.1.2.1 de
SRR18693874 Sensitive lineage1.1.2 None
ERR216928 Other lineage4.9.1 None
SRR26112679 Sensitive lineage1.2.2.2 None
ERR1023221 Sensitive lineage5.3 None
ERR11049529 Sensitive lineage4.1.2.1 None
ERR1465966 Sensitive lineage4.8 None
SAMEA2534777 Sensitive lineage4.1.2.1 de
ERR11082072 Sensitive lineage4.1.2.1 None
SRR6797599 Sensitive lineage1.1.3.1 None
ERR9121476 HR-TB lineage4.8 None
SAMEA2534861 Sensitive lineage4.1.2.1 de
ERR552736 Sensitive lineage4.1.2.1 None
ERR4829566 Sensitive lineage4.8 it
SRR12882274 Sensitive lineage1.2.2.2 None
SRR23340163 Sensitive lineage4.1.2.1 None
ERR551594 Sensitive lineage4.1.2.1 de
ERR550888 Sensitive lineage4.1.2.1 None
SRR6650287 Sensitive lineage1.1.3.1 None
ERR11049287 Sensitive lineage4.1.2.1 None
SRR21689795 Sensitive lineage1.2.2.2 None
ERR4162027 Sensitive lineage5.1.1 None
ERR551150 Sensitive lineage4.1.2.1 de
ERR552110 Sensitive lineage4.1.2.1 None
ERR4828955 Sensitive lineage4.8 None
ERR11043026 Sensitive lineage4.1.2.1 None
SRR6397512 Sensitive lineage4.1.2.1 ca
ERR11049521 Sensitive lineage4.1.2.1 None
SRR21732198 Sensitive lineage1.1.1.1 None
ERR550797 Sensitive lineage4.1.2.1 None
ERR551518 Sensitive lineage4.1.2.1 None
SRR5073587 Sensitive lineage1.1.1.1 vn
SAMEA2534610 Sensitive lineage4.1.2.1 de
SRR6797600 Sensitive lineage1.1.3.1 None
ERR551433 Sensitive lineage4.1.2.1 de
ERR1023222 Sensitive lineage5.3 None
ERR768013 Sensitive lineage1.1.1.1 th
ERR551766 Sensitive lineage4.1.2.1 None
ERR552275 Sensitive lineage4.1.2.1 None
SRR21732246 Sensitive lineage1.1.3.1 None
ERR550971 Sensitive lineage4.1.2.1 None
SRR5065532 Sensitive lineage1.1.1.1 vn
SRR5266536 MDR-TB lineage2.2.1 ru
SAMEA2533407 Sensitive lineage4.1.2.1 de
ERR11081577 Sensitive lineage4.1.2.1 None
ERR8686177 Sensitive lineage4.3.2.1 None
ERR11043776 Sensitive lineage4.1.2.1 None
SRR6964612 MDR-TB lineage3 None
SAMEA2533992 Sensitive lineage4.1.2.1 de
ERR4195499 HR-TB lineage4.8 None
SRR18693887 Sensitive lineage1.1.2 None
SRR14802009 Sensitive lineage4.1.2.1 None
ERR11044298 Sensitive lineage4.1.2.1 None
ERR551886 Sensitive lineage4.1.2.1 None
DRR185098 Sensitive lineage1.1.1.1 vn
ERR4811895 Sensitive lineage4.1.2.1 pe
SAMEA2534361 Sensitive lineage4.1.2.1 de
SRR24799255 Sensitive lineage1.2.2.2 None
SAMEA2534178 Sensitive lineage4.1.2.1 de
ERR2200104 Sensitive lineage4.1.2.1 None
SAMEA2533782 Sensitive lineage4.1.2.1 de
ERR502505 Sensitive lineage5.1.1 gh
ERR550871 Sensitive lineage4.1.2.1 None
ERR9121356 HR-TB lineage4.8 None
SRR5818582 Sensitive lineage1.1.3.1 dj
ERR551716 Sensitive lineage4.8 de
ERR550805 Sensitive lineage4.1.2.1 None
SAMEA2533995 Sensitive lineage4.1.2.1 de
SAMEA2533859 Sensitive lineage4.1.2.1 de
SRR14519725 Sensitive lineage1.2.2.2 None
SAMEA2534266 Sensitive lineage4.1.2.1 de
ERR553280 Sensitive lineage4.1.2.1 None
ERR11044131 Sensitive lineage4.1.2.1 None
SAMEA2533933 Sensitive lineage4.1.2.1 de
ERR551601 Sensitive lineage4.1.2.1 None
ERR11138628 MDR-TB lineage2.2.1 None
SAMEA4041324 Sensitive lineage4.8 None
ERR9121409 HR-TB lineage4.8 None
SRR2101668 Sensitive lineage4.1.1.3 None
ERR551426 Sensitive lineage4.1.2.1 None
SAMEA2533600 Sensitive lineage4.1.2.1 de
SRR6397577 Sensitive lineage4.1.2.1 ca
ERR11068428 Sensitive lineage4.1.2.1 None
ERR552629 Sensitive lineage4.1.2.1 None
ERR4797630 Sensitive lineage1.1.2 in
ERR1465837_ERR1465966 Sensitive lineage4.8 None
ERR502512 Sensitive lineage5.3 gh
SRR22251448 HR-TB lineage4.1.1.3 None
ERR552628 Sensitive lineage4.1.2.1 None
SRR21277428 Sensitive lineage4.5 None
SRR6981910 Sensitive lineage4.1.1.3 None
ERR1465837 Sensitive lineage4.8 None
ERR551507 Sensitive lineage4.1.2.1 None
SAMEA2535270 Sensitive lineage4.1.2.1 de
ERR551050 Sensitive lineage4.1.2.1 None
SRR23316638 HR-TB lineage1.1.1.1 None
ERR553111 Sensitive lineage4.1.2.1 None
ERR4796733 Pre-XDR-TB lineage4.1.1.3 in
ERR553267 Sensitive lineage1.1.1.1 de
ERR4819160 Sensitive lineage4.1.1.3 gb
ERR2514337 Sensitive lineage4.8 gb
SAMEA2533662 Sensitive lineage4.1.2.1 de
SRR3675569 Sensitive lineage4.1.2.1 None
ERR2515719 Pre-XDR-TB lineage2.2.1 za