Rv2780 - c.163_165delGCGinsCA
Drug resistance types
114 Sensitive
0 RR-TB
10 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 7 |
| lineage4.1.2.1 | 73 |
| lineage5.1.1 | 2 |
| lineage4.8 | 15 |
| lineage1.1.3.1 | 5 |
| lineage1.1.2 | 4 |
| lineage1.1.1.1 | 8 |
| lineage4.5 | 2 |
| lineage5.3 | 3 |
| lineage4.1.1.3 | 5 |
| lineage2.2.1 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12882274 | Sensitive | lineage1.2.2.2 | None | ERR550888 | Sensitive | lineage4.1.2.1 | None | SRR3675258 | Sensitive | lineage4.1.2.1 | None | ERR2200104 | Sensitive | lineage4.1.2.1 | None | ERR502505 | Sensitive | lineage5.1.1 | gh | ERR11049287 | Sensitive | lineage4.1.2.1 | None | ERR4162027 | Sensitive | lineage5.1.1 | None | ERR4828955 | Sensitive | lineage4.8 | None | SRR5818582 | Sensitive | lineage1.1.3.1 | dj | ERR550805 | Sensitive | lineage4.1.2.1 | None | SAMEA2533995 | Sensitive | lineage4.1.2.1 | de | ERR552881 | Sensitive | lineage4.1.2.1 | de | ERR550797 | Sensitive | lineage4.1.2.1 | None | ERR551518 | Sensitive | lineage4.1.2.1 | None | SRR28044792 | HR-TB | lineage1.1.2 | None | SRR5073587 | Sensitive | lineage1.1.1.1 | vn | ERR2179689 | Sensitive | lineage4.5 | cn | SRR3675483 | Other | lineage4.1.2.1 | None | SAMEA2534266 | Sensitive | lineage4.1.2.1 | de | SRR6797600 | Sensitive | lineage1.1.3.1 | None | SAMEA2533933 | Sensitive | lineage4.1.2.1 | de | ERR551601 | Sensitive | lineage4.1.2.1 | None | ERR1023222 | Sensitive | lineage5.3 | None | ERR768013 | Sensitive | lineage1.1.1.1 | th | ERR552275 | Sensitive | lineage4.1.2.1 | None | SRR21732246 | Sensitive | lineage1.1.3.1 | None | SAMEA2533532 | Sensitive | lineage4.1.2.1 | de | SRR14519652 | Sensitive | lineage1.2.2.2 | None | ERR550971 | Sensitive | lineage4.1.2.1 | None | SRR6397577 | Sensitive | lineage4.1.2.1 | ca | ERR11068428 | Sensitive | lineage4.1.2.1 | None | SRR18693874 | Sensitive | lineage1.1.2 | None | ERR502512 | Sensitive | lineage5.3 | gh | ERR552628 | Sensitive | lineage4.1.2.1 | None | SRR26112679 | Sensitive | lineage1.2.2.2 | None | ERR4195499 | HR-TB | lineage4.8 | None | ERR1465837 | Sensitive | lineage4.8 | None | SAMEA2534777 | Sensitive | lineage4.1.2.1 | de | SRR14802009 | Sensitive | lineage4.1.2.1 | None | ERR11044298 | Sensitive | lineage4.1.2.1 | None | ERR551886 | Sensitive | lineage4.1.2.1 | None | ERR9121476 | HR-TB | lineage4.8 | None | ERR553111 | Sensitive | lineage4.1.2.1 | None | SAMEA2534861 | Sensitive | lineage4.1.2.1 | de | ERR553267 | Sensitive | lineage1.1.1.1 | de | ERR4819160 | Sensitive | lineage4.1.1.3 | gb | ERR2514337 | Sensitive | lineage4.8 | gb | ERR4829566 | Sensitive | lineage4.8 | it | DRR185098 | Sensitive | lineage1.1.1.1 | vn | ERR4811895 | Sensitive | lineage4.1.2.1 | pe | SRR23340163 | Sensitive | lineage4.1.2.1 | None | SRR24799255 | Sensitive | lineage1.2.2.2 | None | SRR3675569 | Sensitive | lineage4.1.2.1 | None | ERR551594 | Sensitive | lineage4.1.2.1 | de | ERR2515719 | Pre-XDR-TB | lineage2.2.1 | za | SAMEA2534178 | Sensitive | lineage4.1.2.1 | de | SAMEA2533782 | Sensitive | lineage4.1.2.1 | de | ERR550871 | Sensitive | lineage4.1.2.1 | None | ERR550704 | Sensitive | lineage4.1.2.1 | None | ERR552339 | Sensitive | lineage4.1.2.1 | None | ERR551150 | Sensitive | lineage4.1.2.1 | de | ERR552110 | Sensitive | lineage4.1.2.1 | None | ERR11043026 | Sensitive | lineage4.1.2.1 | None | ERR11068174 | Sensitive | lineage4.1.2.1 | None | SRR6832118 | Sensitive | lineage4.1.2.1 | None | SRR6397512 | Sensitive | lineage4.1.2.1 | ca | ERR11049521 | Sensitive | lineage4.1.2.1 | None | SRR21732198 | Sensitive | lineage1.1.1.1 | None | SRR28409441 | Sensitive | lineage4.2.1.1 | None | ERR552027 | Sensitive | lineage4.1.2.1 | None | SAMEA2534610 | Sensitive | lineage4.1.2.1 | de | ERR11044131 | Sensitive | lineage4.1.2.1 | None | SRR11662605 | MDR-TB | lineage1.1.1.1 | None | ERR551766 | Sensitive | lineage4.1.2.1 | None | ERR9121409 | HR-TB | lineage4.8 | None | SRR14520109 | Sensitive | lineage1.2.2.2 | None | SAMEA2533600 | Sensitive | lineage4.1.2.1 | de | SRR5266536 | MDR-TB | lineage2.2.1 | ru | ERR4797630 | Sensitive | lineage1.1.2 | in | ERR216928 | Other | lineage4.9.1 | None | SRR22251448 | HR-TB | lineage4.1.1.3 | None | SRR6964612 | MDR-TB | lineage3 | None | SAMEA2533992 | Sensitive | lineage4.1.2.1 | de | SRR6981910 | Sensitive | lineage4.1.1.3 | None | ERR1023221 | Sensitive | lineage5.3 | None | ERR551507 | Sensitive | lineage4.1.2.1 | None | SRR18693887 | Sensitive | lineage1.1.2 | None | ERR11082072 | Sensitive | lineage4.1.2.1 | None | SAMEA2535270 | Sensitive | lineage4.1.2.1 | de | ERR551050 | Sensitive | lineage4.1.2.1 | None | ERR552736 | Sensitive | lineage4.1.2.1 | None | SAMEA2533662 | Sensitive | lineage4.1.2.1 | de | SAMEA2534361 | Sensitive | lineage4.1.2.1 | de | SRR6650287 | Sensitive | lineage1.1.3.1 | None | ERR550996 | Sensitive | lineage2.2.1;lineage4.1.2.1 | None | SRR21689795 | Sensitive | lineage1.2.2.2 | None | ERR9121356 | HR-TB | lineage4.8 | None | SAMEA2533483 | Sensitive | lineage4.1.2.1 | de | ERR552381 | Sensitive | lineage4.1.2.1 | None | SRR13583320 | MDR-TB | lineage4.3.3 | None | ERR551517 | Sensitive | lineage4.1.2.1 | None | ERR551217 | Sensitive | lineage4.1.2.1 | None | ERR551326 | Sensitive | lineage4.1.2.1 | None | ERR551716 | Sensitive | lineage4.8 | de | ERR552942 | Sensitive | lineage4.1.2.1 | de | SAMEA2533859 | Sensitive | lineage4.1.2.1 | de | SRR5073700 | HR-TB | lineage4.8 | vn | SRR14519725 | Sensitive | lineage1.2.2.2 | None | ERR551765 | Sensitive | lineage4.1.2.1 | None | ERR553280 | Sensitive | lineage4.1.2.1 | None | SRR3675271 | Sensitive | lineage4.1.2.1 | gb | ERR11138628 | MDR-TB | lineage2.2.1 | None | ERR551433 | Sensitive | lineage4.1.2.1 | de | SAMEA4041324 | Sensitive | lineage4.8 | None | ERR4195368 | HR-TB | lineage4.8 | None | SRR2101668 | Sensitive | lineage4.1.1.3 | None | ERR4195811 | HR-TB | lineage4.8 | None | ERR551426 | Sensitive | lineage4.1.2.1 | None | ERR2200144 | Sensitive | lineage4.1.2.1 | de | SRR5065532 | Sensitive | lineage1.1.1.1 | vn | ERR552629 | Sensitive | lineage4.1.2.1 | None | ERR552868 | Sensitive | lineage4.1.2.1 | de | SAMEA2533407 | Sensitive | lineage4.1.2.1 | de | ERR1465837_ERR1465966 | Sensitive | lineage4.8 | None | ERR11081577 | Sensitive | lineage4.1.2.1 | None | ERR8686177 | Sensitive | lineage4.3.2.1 | None | ERR11043776 | Sensitive | lineage4.1.2.1 | None | SRR21277428 | Sensitive | lineage4.5 | None | ERR11049529 | Sensitive | lineage4.1.2.1 | None | ERR1465966 | Sensitive | lineage4.8 | None | SRR6797599 | Sensitive | lineage1.1.3.1 | None | SRR23316638 | HR-TB | lineage1.1.1.1 | None | ERR4796733 | Pre-XDR-TB | lineage4.1.1.3 | in |
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