lineage | Count |
---|---|
lineage2.2.1 | 47 |
lineage3 | 1 |
La1.8.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2.2 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | SRR13232548 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173192 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232405 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632815 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232605 | MDR-TB | lineage2.2.1 | None | SRR14088365 | XDR-TB | lineage3 | None | SRR18714896 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001882 | XDR-TB | lineage2.2.1 | None | SRR22175257 | MDR-TB | lineage2.2.1 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR5152952 | Pre-XDR-TB | lineage2.2.1 | None | SRR5709799 | Pre-XDR-TB | lineage2.2.1 | th | SRR3743475 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | ERR2747679 | Other | La1.8.1 | None | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | ERR4796469 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR137247 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4799582 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796424 | XDR-TB | lineage2.2.1 | in | ERR3794382 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651594 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6807707 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287846 | XDR-TB | lineage4 | pe | ERR4800460 | Pre-XDR-TB | lineage2.2.1 | in | ERR3794548 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665963 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665964 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911347 | MDR-TB | lineage4.3.4.2 | None | ERR6866946 | Sensitive | lineage4.1.1 | None | ERR7801221 | HR-TB | lineage4.3.4.2.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866069 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665509 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665507 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665508 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665510 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003099 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665714 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665715 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003100 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003102 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013538 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003103 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013537 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013539 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013540 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1048836 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048835 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869286 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048839 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048838 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567792 | Pre-XDR-TB | lineage2.2.1 | None |
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