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SRA data
Rv2780
- c.376_377dupGC
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
0 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
7
lineage4.8
6
lineage4.1.1.3
2
lineage4.1.2.1
2
lineage3
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11080930
Pre-XDR-TB
lineage4.1.1.3
None
ERR13285091
Pre-XDR-TB
lineage4.1.1.3
None
ERR4813827
Pre-XDR-TB
lineage4.1.2.1
None
ERR4813899
Pre-XDR-TB
lineage4.1.2.1
None
ERR8665922
Pre-XDR-TB
lineage2.2.1
None
SRR13232488
Pre-XDR-TB
lineage2.2.1
None
SRR13232489
Pre-XDR-TB
lineage2.2.1
None
SRR13232491
Pre-XDR-TB
lineage2.2.1
None
SRR13232567
Pre-XDR-TB
lineage2.2.1
None
SRR13232570
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 18 entries
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