TB-Profiler
Home
Upload
SRA data
Rv2780
- c.897dupG
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
7 MDR-TB
66 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
34
lineage4.3.3
15
lineage4.1.2.1
6
lineage4.8
5
lineage2.2.1.1
4
lineage3
3
lineage4.4.1.1
2
lineage4.3.4.1
2
lineage4.7
2
lineage2.2.2
2
Showing 1 to 10 of 17 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
82
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130203
Pre-XDR-TB
lineage2.2.1
None
ERR10610369
Pre-XDR-TB
lineage4.4.1.1
None
ERR11069098
Pre-XDR-TB
lineage4.8
None
ERR11081287
Pre-XDR-TB
lineage2.2.1
None
ERR11081514
Pre-XDR-TB
lineage2.2.1
None
ERR11488867
XDR-TB
lineage4.3.4.2.1
None
ERR12117907
Pre-XDR-TB
lineage4.3.3
None
ERR13266571
XDR-TB
lineage2.2.1
None
ERR13266572
XDR-TB
lineage2.2.1
None
ERR13284082
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 82 entries
Previous
1
2
3
4
5
…
9
Next