lineage | Count |
---|---|
lineage2.2.1 | 14 |
1 | |
lineage6.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage3 | 3 |
lineage4.1.2 | 1 |
La1.7.1 | 1 |
lineage4.1.2.1 | 4 |
La1.8.1 | 1 |
lineage2.2 | 1 |
lineage3.1.1 | 1 |
lineage5.1.3 | 1 |
lineage4.9 | 1 |
lineage4.8 | 2 |
lineage4.7 | 1 |
lineage4.8.2 | 1 |
lineage4 | 1 |
lineage4.3.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | ERR10867699 | MDR-TB | lineage2.2.1 | None | ERR6336756 | Sensitive | None | ERR5866021 | Pre-XDR-TB | lineage2.2.1 | None | ERR4192391 | Sensitive | lineage6.1.1 | None | ERR5908260 | Sensitive | lineage1.2.1.2.1 | None | SRR12199470 | Sensitive | lineage3 | None | ERR9892553 | Sensitive | lineage4.1.2 | None | SRR11972446 | MDR-TB | lineage2.2.1 | None | SRR11972371 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295800 | Sensitive | lineage2.2.1 | None | SRR13199753 | Other | La1.7.1 | None | SRR13870401 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR3675533 | Sensitive | lineage3 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295827 | Sensitive | lineage2.2.1 | None | SRR6207281 | Pre-XDR-TB | lineage2.2 | None | ERR1577244 | Sensitive | lineage2.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR2512669 | Sensitive | lineage5.1.3 | gb | SRR3732702 | Sensitive | lineage4.9 | None | ERR2229149 | Sensitive | lineage4.8 | None | SRR3732586 | Other | lineage4.1.2.1 | None | ERR2229428 | Sensitive | lineage4.8 | None | ERR4818730 | Sensitive | lineage4.7 | None | ERR2514771 | RR-TB | lineage4.8.2 | None | ERR4821955 | Pre-XDR-TB | lineage3 | None | ERR4820947 | Sensitive | lineage4 | None | ERR4821165 | Sensitive | lineage4.3.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4972538 | MDR-TB | lineage4.1.2.1.1 | None | SRR6045012 | Sensitive | lineage4.1.2.1 | gb | SRR6045045 | Other | lineage2.2.1 | None | SRR6831897 | Sensitive | lineage4.1.2.1 | None | DRR034424 | RR-TB | lineage2.2.1 | None | DRR034532 | HR-TB | lineage2.2.1 | None |
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