lineage | Count |
---|---|
lineage4.1.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1 | 10 |
lineage4.3.2 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 4 |
lineage4.3.3 | 3 |
lineage4.6.2.2 | 1 |
lineage4.8 | 1 |
lineage4.2.1.1 | 1 |
lineage4.1.2.1 | 4 |
lineage4.4.2 | 1 |
lineage1.1.2 | 2 |
lineage4.3.4.1 | 1 |
La1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.2.2.2 | 1 |
lineage6.3.1 | 1 |
lineage1.1.1 | 1 |
lineage4.6.5 | 1 |
lineage4.8;lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR4034823 | Sensitive | lineage4.1.2 | za | SRR4033628 | Sensitive | lineage4.4.1.1.1 | za | SRR4033777 | Sensitive | lineage2.2.1 | za | SRR4034520 | Sensitive | lineage4.3.2 | za | SRR4034657 | Sensitive | lineage2.2.1 | za | SRR4033740 | Sensitive | lineage2.2.1 | za | SRR4037896 | Sensitive | lineage4.3.2.1 | za | SRR4035490 | RR-TB | lineage3 | za | SRR4035535 | RR-TB | lineage3 | za | SRR4037954 | Sensitive | lineage2.2.1 | za | SRR9971047 | MDR-TB | lineage4.3.3 | None | SRR4037953 | Sensitive | lineage2.2.1 | za | ERR4829177 | RR-TB | lineage4.6.2.2 | ng | ERR11067305 | Sensitive | lineage4.8 | None | SRR7646029 | HR-TB | lineage4.2.1.1 | None | ERR11043577 | Sensitive | lineage4.1.2.1 | None | SRR11342637 | MDR-TB | lineage4.3.3 | None | ERR4810513 | Sensitive | lineage4.4.2 | cn | ERR7764429 | Other | lineage4.1.2.1 | None | ERR11050205 | Other | lineage3 | None | ERR11044871 | HR-TB | lineage1.1.2 | None | ERR3957935 | RR-TB | lineage4.3.4.1 | None | ERR4772204 | Other | La1.2 | None | SRR10869185 | Pre-XDR-TB | lineage2.2.2 | None | ERR11050383 | Sensitive | lineage2.2.1 | None | ERR11050430 | Sensitive | lineage4.2.2.2 | None | ERR11050481 | Sensitive | lineage6.3.1 | None | SRR11972238 | Other | lineage1.1.2 | None | ERR11050460 | Sensitive | lineage1.1.1 | None | ERR11050502 | Other | lineage4.6.5 | None | SRR18715377 | Other | lineage4.8;lineage4.1.2.1 | None | ERR11050722 | HR-TB | lineage2.2.1 | None | SRR14781859 | MDR-TB | lineage4.2.1 | None | SRR14801574 | Sensitive | lineage2.2.1 | None | SRR16156743 | Pre-XDR-TB | lineage4.3.3 | None | SRR18715322 | Sensitive | lineage4.1.2.1 | None | SRR21277752 | Sensitive | lineage2.2.1.1 | None | SRR21277779 | Sensitive | lineage4.5 | None | SRR21277770 | Other | lineage2.2.1.1 | None | SRR21277812 | Sensitive | lineage2.2.1 | None | ERR11068157 | Sensitive | lineage4.1.2.1 | None | SRR21277813 | Sensitive | lineage2.2.1 | None | ERR11080974 | Sensitive | lineage3 | None |
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