lineage | Count |
---|---|
lineage3 | 5 |
lineage4.9 | 3 |
lineage2.2.2 | 1 |
lineage4.1.2.1 | 11 |
lineage4.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.2.1 | 2 |
lineage2.2.1 | 21 |
lineage4 | 1 |
La1.8.2 | 3 |
lineage4.8 | 12 |
lineage4.6.5 | 1 |
lineage4.2.2.2 | 1 |
La1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.3.3 | 5 |
lineage4.3.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 | ERR4829943 | MDR-TB | lineage3 | pk | ERR4829072 | RR-TB | lineage4.9 | None | ERR10748385 | MDR-TB | lineage2.2.2 | None | ERR10465744 | Sensitive | lineage4.1.2.1 | None | ERR10680129 | MDR-TB | lineage4.1 | None | ERR11049041 | Sensitive | lineage4.4.1.1 | None | ERR10762289 | MDR-TB | lineage4.2.1 | None | ERR11043228 | Sensitive | lineage2.2.1 | None | ERR11044519 | Sensitive | lineage4.1.2.1 | None | ERR11044302 | Sensitive | lineage4 | None | ERR6140816 | Other | La1.8.2 | None | ERR4553591 | MDR-TB | lineage4.8 | None | ERR4553842 | MDR-TB | lineage4.8 | None | ERR5979717 | Sensitive | lineage4.9 | None | ERR5979831 | Sensitive | lineage4.9 | None | ERR11044657 | MDR-TB | lineage2.2.1 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | ERR4796827 | RR-TB | lineage2.2.1 | in | ERR4796894 | XDR-TB | lineage2.2.1 | in | ERR4796938 | Pre-XDR-TB | lineage2.2.1 | in | ERR6148923 | Other | La1.8.2 | None | ERR9286036 | Sensitive | lineage4.2.2.2 | None | ERR7911122 | MDR-TB | lineage2.2.1 | vn | ERR9125120 | Sensitive | lineage4.8 | None | ERR6150048 | Other | La1.8.2 | None | ERR6198349 | Other | La1.2 | None | SRR10810927 | Sensitive | lineage1.1.2 | None | SRR10303303 | Sensitive | lineage4.3.3 | None | SRR10430331 | Sensitive | lineage4.3.3 | None | SRR10851708 | Sensitive | lineage4.3.2 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR10869252 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR14519844 | Sensitive | lineage4.4.1 | None | SRR12006695 | Sensitive | lineage1.2.1.2.1 | None | ERR11050487 | Sensitive | lineage4.1.2.1 | None | SRR13232438 | Sensitive | lineage4.8 | None | SRR14165078 | Sensitive | lineage4.3.3 | None | SRR14782650 | HR-TB | lineage4.1.2.1 | None | SRR14781912 | Other | lineage4.2.1.1 | None | SRR14782599 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782664 | Sensitive | lineage4.8 | None | SRR14807544 | MDR-TB | lineage4.2.1 | None | SRR14801300 | MDR-TB | lineage2.2.1 | None | SRR14801982 | Sensitive | lineage4.3.3 | None | SRR14802051 | Sensitive | lineage2.2.1 | None | SRR16088279 | Other | lineage2.2.1 | None | SRR18715217 | Sensitive | lineage4.1.2.1 | None | SRR16088446 | HR-TB | lineage4.3.3 | None | ERR11050727 | Sensitive | lineage4.8 | None | SRR18715403 | MDR-TB | lineage2.2.1 | None | SRR19303829 | Sensitive | lineage2.2.1 | None | ERR11067764 | Sensitive | lineage4.3.4.2 | None | SRR19303958 | Sensitive | lineage3.1.2.1 | None | SRR19303837 | Sensitive | lineage4.1.2.1 | None | SRR19304037 | Sensitive | lineage3 | None | SRR19304105 | Sensitive | lineage4.8 | None | SRR19304123 | Sensitive | lineage4.1.2.1 | None | SRR23938594 | MDR-TB | lineage2.2.1 | None | ERR11068442 | Sensitive | lineage3 | None | ERR11080863 | Sensitive | lineage4.1.2.1 | None | SRR23938668 | MDR-TB | lineage2.2.1 | None | SRR23938689 | Sensitive | lineage2.2.1 | None | SRR23938706 | Sensitive | lineage4.5 | None | SRR23938690 | MDR-TB | lineage2.2.1 | None | ERR2229399 | Sensitive | lineage4.8 | None | SRR24114346 | Other | lineage3 | None | ERR7363043 | Sensitive | lineage4.3.4.1 | None | ERR7363038 | Sensitive | lineage4.1.2.1 | None | ERR7363085 | Sensitive | lineage4.1.2.1 | None | ERR176698 | Sensitive | lineage4.3.4.2.1 | mw | ERR2229563 | Sensitive | lineage4.8 | None | ERR2027208 | Sensitive | lineage4.6.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR11049665 | Sensitive | lineage4.1.2.1 | None | ERR2229529 | Sensitive | lineage4.8 | None | ERR2229558 | Sensitive | lineage4.8 | dk | SRR4033880 | Sensitive | lineage2.2.1 | za | ERR4822410 | Other | lineage2.2.1 | ua | ERR11049718 | HR-TB | lineage3 | None | ERR4822640 | Sensitive | lineage4.8 | None | ERR4828032 | MDR-TB | lineage2.2.1 | None |
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