lineage | Count |
---|---|
lineage4.1.2.1 | 8 |
La1.8.1 | 2 |
lineage1.1.2 | 2 |
lineage3 | 5 |
lineage4.9 | 3 |
lineage2.2.1.1 | 4 |
La1.8.2 | 5 |
lineage4.6.2.2 | 1 |
La1.2 | 2 |
1 | |
lineage2.2.1 | 26 |
lineage4.3.2 | 1 |
lineage6 | 1 |
lineage4.8 | 15 |
lineage3.1.1 | 1 |
lineage4.3.3 | 3 |
lineage4.7 | 1 |
La1.2.BCG | 2 |
lineage4.2.1 | 5 |
lineage4.5 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.2.1.1 | 2 |
lineage4 | 2 |
La1.7.1 | 2 |
lineage4.1 | 1 |
lineage4.2.2.1 | 1 |
La1.7.X-unk4 | 1 |
lineage2.2 | 1 |
lineage4.1.1.3 | 2 |
lineage4.1.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | ERR11049445 | Sensitive | lineage4.1.2.1 | None | ERR4627390 | Other | La1.8.1 | None | ERR11049488 | Other | lineage1.1.2 | None | ERR4553569 | MDR-TB | lineage3 | None | ERR5979787 | Other | lineage4.9 | None | ERR5979785 | Sensitive | lineage4.9 | None | ERR4797050 | MDR-TB | lineage1.1.2 | in | ERR4797105 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5979790 | Sensitive | lineage4.9 | None | ERR6140670 | Other | La1.8.2 | None | ERR6139639 | Other | La1.8.2 | None | ERR6140466 | Other | La1.8.2 | None | ERR6140772 | Other | La1.8.2 | None | ERR6140775 | Other | La1.8.2 | None | ERR11049965 | Other | lineage4.6.2.2 | None | ERR6198442 | Other | La1.2 | None | ERR7451301 | Sensitive | None | ERR6198445 | Other | La1.2 | None | ERR7911320 | MDR-TB | lineage2.2.1 | vn | ERR7764355 | Sensitive | lineage4.3.2 | None | ERR11049985 | Other | lineage6 | None | ERR7911321 | MDR-TB | lineage2.2.1 | vn | ERR7911303 | Pre-XDR-TB | lineage2.2.1.1 | vn | SRR10869056 | Sensitive | lineage2.2.1.1 | None | ERR11050070 | Sensitive | lineage4.8 | None | SRR10482965 | Other | La1.8.1 | None | ERR11050027 | Sensitive | lineage3 | None | ERR11050028 | Sensitive | lineage3.1.1 | None | ERR11050292 | HR-TB | lineage3 | None | SRR14782543 | Sensitive | lineage4.8 | None | ERR11050480 | Other | lineage4.1.2.1 | None | SRR14782176 | MDR-TB | lineage2.2.1 | None | SRR14782428 | Sensitive | lineage4.3.3 | None | ERR11050555 | Sensitive | lineage4.8 | None | ERR11050567 | Sensitive | lineage4.7 | None | SRR14781914 | HR-TB | lineage2.2.1 | None | SRR14782017 | Sensitive | lineage4.3.3 | None | SRR14782589 | Sensitive | lineage4.8 | None | SRR14782580 | Sensitive | lineage4.1.2.1 | None | SRR14782606 | MDR-TB | lineage2.2.1 | None | SRR14782588 | MDR-TB | lineage2.2.1 | None | SRR14782630 | MDR-TB | lineage2.2.1 | None | SRR14782722 | Other | La1.2.BCG | None | SRR14782668 | Sensitive | lineage2.2.1 | None | SRR14782660 | MDR-TB | lineage2.2.1 | None | SRR14801355 | Sensitive | lineage4.8 | None | SRR14782788 | Other | lineage2.2.1 | None | SRR14801767 | MDR-TB | lineage4.2.1 | None | SRR14801599 | MDR-TB | lineage4.2.1 | None | SRR14802076 | MDR-TB | lineage4.2.1 | None | ERR11050662 | Sensitive | lineage4.5 | None | ERR11050596 | Sensitive | lineage4.8 | None | ERR11050629 | Sensitive | lineage1.2.1.2.1 | None | ERR11050630 | Sensitive | lineage4.1.2.1 | None | SRR16088127 | HR-TB | lineage4.2.1 | None | ERR11050678 | Sensitive | lineage4.4.1.1 | None | SRR16088264 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714908 | Sensitive | lineage2.2.1 | None | SRR16156831 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18714771 | Sensitive | lineage2.2.1 | None | SRR16156684 | Pre-XDR-TB | lineage2.2.1 | None | SRR18714758 | Sensitive | lineage4.2.1.1 | None | SRR18715051 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715050 | Sensitive | lineage4 | None | SRR18715417 | Sensitive | lineage2.2.1 | None | SRR18715211 | Sensitive | lineage4.8 | None | SRR18715303 | MDR-TB | lineage2.2.1 | None | ERR11068922 | Other | La1.7.1 | None | SRR18715438 | Sensitive | lineage4.3.3 | None | ERR11050790 | Sensitive | lineage4.8 | None | SRR18715418 | Other | lineage2.2.1 | None | SRR18715451 | HR-TB | lineage4.8 | None | SRR18715467 | Sensitive | lineage4.8 | None | SRR18715476 | Sensitive | lineage4.2.1.1 | None | ERR11068925 | Sensitive | lineage2.2.1 | None | ERR11081750 | Sensitive | lineage4.1 | None | SRR23862002 | Other | lineage4.8 | None | ERR11082588 | Sensitive | lineage4.1.2.1 | None | ERR11082593 | Sensitive | lineage4.2.2.1 | None | SRR23938676 | Sensitive | lineage2.2.1 | None | SRR23938648 | Other | lineage2.2.1 | None | SRR23938586 | HR-TB | lineage2.2.1 | None | ERR2815589 | Other | La1.7.X-unk4 | None | SRR23938689 | Sensitive | lineage2.2.1 | None | ERR11049623 | Sensitive | lineage4 | None | ERR2229108 | Sensitive | lineage4.8 | dk | SRR23311062 | MDR-TB | lineage4.2.1 | None | ERR2815562 | Other | La1.7.1 | None | SRR24114351 | Pre-XDR-TB | lineage3 | None | ERR2229112 | Sensitive | lineage4.8 | dk | ERR2229186 | Sensitive | lineage4.8 | None | SRR4033298 | Sensitive | lineage2.2.1 | za | SRR23311026 | MDR-TB | lineage2.2 | None | ERR4828221 | MDR-TB | lineage2.2.1.1 | None | ERR4829166 | Sensitive | lineage4.1.1.3 | ng | ERR10969205 | Sensitive | lineage4.1.1 | None | ERR11049744 | Other | La1.2.BCG | None | ERR4872235 | MDR-TB | lineage4.1.2.1 | None | ERR10969202 | Sensitive | lineage4.1.2.1 | None | ERR11043310 | Sensitive | lineage4.8 | None | ERR11043679 | Sensitive | lineage4.3 | None | ERR11044547 | Sensitive | lineage4.1.1.3 | None | ERR11044569 | Sensitive | lineage3 | None | ERR11044778 | Other | lineage4.1.2.1 | None |
---|