lineage | Count |
---|---|
La1.8.1 | 2 |
lineage2.2.1 | 12 |
lineage9 | 1 |
lineage4.2.2.2 | 2 |
lineage4.8 | 1 |
lineage7 | 10 |
lineage2.2.1.1 | 1 |
lineage6.1.1 | 1 |
lineage4.9 | 2 |
lineage1.2.2.2 | 2 |
lineage6 | 2 |
lineage3.1.1 | 15 |
lineage4.1.2 | 2 |
lineage4.2.1 | 1 |
lineage1.1.2 | 7 |
lineage1.1.3.2 | 13 |
lineage1.2.2.1 | 4 |
lineage4.3.4.2.1 | 19 |
lineage4.3.4.1 | 4 |
lineage4.9.1 | 7 |
lineage4.1.2.1 | 4 |
lineage4.1.2;lineage2.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 3 |
lineage4.3.2.1;lineage3.1.1 | 1 |
lineage4.3.4.2.1;lineage4.3.4.1 | 1 |
lineage4.4.1.1 | 2 |
lineage4.1.1.3 | 5 |
lineage4.7 | 1 |
lineage1.1.3 | 1 |
lineage1.2.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6 | 1 |
lineage4.4.2 | 1 |
lineage4.1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 133 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791940 | Other | La1.8.1 | None | SRR125293 | Sensitive | lineage2.2.1 | None | ERR181315 | MDR-TB | lineage9 | so | SRR2100066 | Sensitive | lineage4.2.2.2 | None | SRR23862180 | Sensitive | lineage4.8 | None | ERR1200639 | Sensitive | lineage7 | et | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | ERR4815935 | Sensitive | lineage4.9 | None | ERR233364 | Other | lineage1.2.2.2 | cn | ERR233368 | Sensitive | lineage6 | None | ERR1200631 | Sensitive | lineage7 | et | ERR234128 | Sensitive | lineage2.2.1 | cn | ERR1200630 | Sensitive | lineage3.1.1 | et | SRR4035792 | Sensitive | lineage4.1.2 | None | ERR234139 | Sensitive | lineage2.2.1 | None | ERR1200605 | Other | lineage4.2.1 | et | ERR234237 | Sensitive | lineage1.1.2 | None | ERR1200612 | Sensitive | lineage7 | et | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR245672 | Sensitive | lineage1.2.2.1 | mw | ERR245674 | Sensitive | lineage1.1.3.2 | mw | ERR245677 | Sensitive | lineage1.1.3.2 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245693 | Sensitive | lineage4.3.4.2.1 | mw | ERR245697 | Sensitive | lineage4.3.4.1 | mw | ERR245695 | Sensitive | lineage1.1.3.2 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245698 | Sensitive | lineage1.1.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245694 | Sensitive | lineage3.1.1 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245708 | Sensitive | lineage4.3.4.2.1 | mw | ERR245710 | Sensitive | lineage2.2.1 | mw | ERR245707 | Sensitive | lineage4.3.4.2.1 | mw | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245712 | Sensitive | lineage4.9.1 | mw | ERR245709 | Other | lineage4.3.4.2.1 | mw | ERR245713 | Sensitive | lineage3.1.1 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR245735 | Sensitive | lineage2.2.1 | mw | ERR245733 | HR-TB | lineage4.3.4.2.1 | mw | ERR245728 | Sensitive | lineage2.2.1 | mw | ERR245746 | Sensitive | lineage4.3.4.2.1 | mw | ERR245738 | Sensitive | lineage4.3.4.2.1 | mw | ERR245742 | Sensitive | lineage1.1.2 | mw | ERR245759 | HR-TB | lineage4.1.2.1 | mw | ERR245749 | Sensitive | lineage4.3.4.2.1 | mw | ERR245752 | Other | lineage4.3.4.2.1 | mw | ERR245756 | Sensitive | lineage4.3.4.2.1 | mw | ERR245760 | Sensitive | lineage1.1.3.2 | mw | ERR245754 | Sensitive | lineage4.1.2;lineage2.2.1 | mw | ERR245758 | Other | lineage4.9.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245757 | HR-TB | lineage3.1.1 | mw | ERR245762 | Sensitive | lineage4.3.2.1 | mw | ERR245761 | Sensitive | lineage1.1.3.2 | mw | ERR245765 | Sensitive | lineage4.3.4.1 | mw | ERR245755 | Sensitive | lineage4.3.4.2.1 | mw | ERR245774 | HR-TB | lineage4.1.2.1 | mw | ERR245763 | Sensitive | lineage1.1.3.2 | mw | ERR245768 | Sensitive | lineage3.1.1 | mw | ERR245778 | Sensitive | lineage4.3.4.2.1 | mw | ERR245779 | Sensitive | lineage4.3.4.2.1 | mw | ERR245793 | Other | lineage3 | mw | ERR245785 | Sensitive | lineage4.9 | mw | ERR245784 | Sensitive | lineage1.1.3.2 | mw | ERR245791 | Sensitive | lineage4.1.2 | mw | ERR245789 | Sensitive | lineage3.1.1 | mw | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245799 | Sensitive | lineage4.3.4.1 | mw | ERR245792 | HR-TB | lineage3.1.1 | mw | ERR245805 | HR-TB | lineage3.1.1 | mw | ERR245797 | Sensitive | lineage4.3.4.2.1;lineage4.3.4.1 | mw | ERR245800 | Sensitive | lineage4.4.1.1 | mw | ERR245804 | Sensitive | lineage4.1.1.3 | mw | ERR245798 | Sensitive | lineage4.3.4.2.1 | mw | ERR245807 | Sensitive | lineage4.7 | mw | ERR245810 | Sensitive | lineage4.9.1 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR245817 | Sensitive | lineage1.1.3.2 | None | ERR245815 | Sensitive | lineage4.3.4.2.1 | None | ERR245819 | Other | lineage3.1.1 | None | ERR245811 | Sensitive | lineage1.2.2.1 | mw | ERR245823 | Sensitive | lineage4.1.1.3 | None | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR245822 | Other | lineage1.1.3.2 | None | ERR245826 | Sensitive | lineage4.3.4.2.1 | mw | ERR245825 | Sensitive | lineage1.1.3 | None | ERR245828 | Sensitive | lineage4.1.1.3 | mw | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | ERR245831 | Sensitive | lineage2.2.1 | mw | ERR245835 | Other | lineage4.9.1 | mw | ERR245834 | Sensitive | lineage2.2.1 | mw | ERR245827 | Sensitive | lineage3.1.1 | mw | ERR245839 | Sensitive | lineage3.1.1 | mw | ERR245841 | Sensitive | lineage4.1.1.3 | mw | ERR245830 | Other | lineage3 | mw | ERR245836 | MDR-TB | lineage1.2.2 | mw | ERR245845 | Sensitive | lineage4.9.1 | mw | ERR1200636 | Other | lineage7 | et | ERR245846 | Sensitive | lineage2.2.1 | None | ERR245847 | Sensitive | lineage4.9.1 | mw | ERR245842 | Sensitive | lineage4.1.1.3 | mw | ERR245849 | Other | lineage3 | mw | ERR1200608 | Sensitive | lineage7 | et | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR1200602 | Sensitive | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200604 | Sensitive | lineage7 | et | ERR1200625 | Sensitive | lineage7 | et | ERR1200634 | Sensitive | lineage7 | et | ERR233366 | Sensitive | lineage6 | None | ERR1200616 | Sensitive | lineage4.1.2.1 | et | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR233370 | Other | lineage2.2.1 | None | ERR1200621 | Sensitive | lineage4.6 | et | ERR233357 | Other | lineage2.2.1 | None | SRR671778 | Sensitive | lineage4.4.2 | cn | ERR1200633 | Sensitive | lineage7 | et | ERR038267 | Sensitive | lineage4.2.2.2 | None | SRR8073606 | Other | La1.8.1 | None | ERR040133 | Sensitive | lineage3.1.1 | ug | ERR038296 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR040091 | Sensitive | lineage3.1.1 | gb | ERR040130 | MDR-TB | lineage4.4.1.1 | ug |
---|