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SRA data
Rv3197A
- c.-317delG
Drug resistance types
7 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
3
lineage4.5
2
lineage4.4.1.1
2
lineage4.2.2
1
lineage4.6.2.2
1
lineage3
1
lineage1.1.2
1
lineage4.1.2.1
1
La1.8;lineage1.2.2.2
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11044177
Sensitive
lineage4.5
None
ERR13194193
Sensitive
lineage4.2.2
None
ERR2517320
HR-TB
lineage4.4.1.1
nl
ERR3275589
HR-TB
lineage4.4.1.1
nl
ERR369640
HR-TB
lineage4.6.2.2
None
SRR17703709
Sensitive
lineage2.2.1
None
SRR21728729
Sensitive
lineage4.5
None
SRR24255967
Sensitive
lineage4.1.2.1
None
SRR25207031
Pre-XDR-TB
lineage2.2.1
None
SRR25207032
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 13 entries
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