Rv3197A - c.-80A>C
Drug resistance types
2 Sensitive
0 RR-TB
2 HR-TB
87 MDR-TB
29 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage2.2.1 | 89 |
| lineage4 | 2 |
| lineage4.3.2 | 3 |
| lineage4.1.2.1 | 6 |
| lineage4.8;lineage2.2.1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage2.2 | 1 |
| lineage3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.1 | 2 |
| lineage4.2.1 | 1 |
| 2 | |
| lineage4.1.2.1;lineage1.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 64 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13232727 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142326 | MDR-TB | lineage2.2.1 | None | SRR12142329 | MDR-TB | lineage2.2.1 | None | SRR12142350 | MDR-TB | lineage2.2.1 | None | SRR13232605 | MDR-TB | lineage2.2.1 | None | SRR13232649 | MDR-TB | lineage2.2.1 | None | SRR14807477 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715136 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534518 | MDR-TB | lineage2.2.1 | uz | SRR23938641 | MDR-TB | lineage2.2.1 | None | SAMEA2533485 | MDR-TB | lineage2.2.1 | uz | SAMEA2535201 | MDR-TB | lineage2.2.1 | uz | SAMEA2535198 | MDR-TB | lineage2.2.1 | uz | SAMEA2534986 | MDR-TB | lineage2.2.1 | uz | SAMEA2533724 | MDR-TB | lineage2.2.1 | uz | SAMEA2533615 | MDR-TB | lineage2.2.1 | uz | SAMEA2534185 | MDR-TB | lineage2.2.1 | uz | SAMEA2533843 | MDR-TB | lineage2.2.1 | uz | SAMEA2534721 | MDR-TB | lineage2.2.1 | uz | ERR4813660 | MDR-TB | lineage4 | None | SAMEA2534187 | MDR-TB | lineage2.2.1 | uz | ERR2184354 | Pre-XDR-TB | lineage4.3.2 | pe | SAMEA2534489 | MDR-TB | lineage2.2.1 | uz | SAMEA2534749 | MDR-TB | lineage2.2.1 | uz | ERR551430 | MDR-TB | lineage2.2.1 | uz | SAMEA2534804 | MDR-TB | lineage2.2.1 | uz | SAMEA2533377 | MDR-TB | lineage2.2.1 | uz | SAMEA2534869 | MDR-TB | lineage2.2.1 | uz | SAMEA2535203 | MDR-TB | lineage2.2.1 | uz | ERR2510656 | Pre-XDR-TB | lineage2.2.1 | it | SAMEA2533887 | MDR-TB | lineage2.2.1 | uz | SAMEA2533983 | MDR-TB | lineage2.2.1 | uz | SAMEA2534739 | MDR-TB | lineage2.2.1 | uz | SAMEA2534763 | MDR-TB | lineage2.2.1 | uz | ERR234603 | Other | lineage2.2.1 | ru | ERR234662 | HR-TB | lineage2.2.1 | ru | SAMEA2533433 | MDR-TB | lineage2.2.1 | uz | SAMEA2533423 | MDR-TB | lineage2.2.1 | uz | SAMEA2534703 | MDR-TB | lineage2.2.1 | uz | ERR2510135 | MDR-TB | lineage4.1.2.1 | pe | SAMEA2534067 | MDR-TB | lineage2.2.1 | uz | SAMEA2534350 | MDR-TB | lineage2.2.1 | uz | SAMEA2533440 | MDR-TB | lineage2.2.1 | uz | ERR2516452 | Sensitive | lineage4.3.2 | pe | SAMEA2535362 | MDR-TB | lineage2.2.1 | uz | SAMEA2533835 | MDR-TB | lineage2.2.1 | uz | ERR2677438 | MDR-TB | lineage2.2.1 | de | ERR551145 | MDR-TB | lineage2.2.1 | uz | SAMEA2534654 | MDR-TB | lineage2.2.1 | uz | SAMEA2534156 | MDR-TB | lineage2.2.1 | uz | SAMEA2534496 | MDR-TB | lineage2.2.1 | uz | ERR4827665 | MDR-TB | lineage2.2.1 | None | ERR4822586 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | SRR5709938 | Pre-XDR-TB | lineage4.3.4.2 | th | SAMEA2534616 | MDR-TB | lineage2.2.1 | uz | ERR552441 | MDR-TB | lineage2.2.1 | uz | SAMEA2534479 | MDR-TB | lineage2.2.1 | uz | SRR20969450 | MDR-TB | lineage2.2 | None | ERR4822594 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | tm | ERR4822351 | MDR-TB | lineage2.2.1 | None | SAMEA2533622 | MDR-TB | lineage2.2.1 | uz | SAMEA2533730 | MDR-TB | lineage2.2.1 | uz | ERR4831525 | Pre-XDR-TB | lineage3 | pk | SAMEA2534442 | MDR-TB | lineage2.2.1 | uz | SRR671722 | MDR-TB | lineage2.2.1 | cn | SRR6832299 | MDR-TB | lineage4.3.3 | None | ERR552517 | MDR-TB | lineage2.2.1 | uz | SAMEA2533754 | MDR-TB | lineage2.2.1 | uz | SRR6785291 | Sensitive | lineage4.2.1.1 | None | SRR6832411 | MDR-TB | lineage2.2.1 | None | SRR6832579 | MDR-TB | lineage2.2.1 | None | SRR6832625 | MDR-TB | lineage4.3.3 | None | ERR2984801 | MDR-TB | lineage4.1.1.3 | None | SAMEA2534977 | MDR-TB | lineage2.2.1 | uz | DRR130078 | Pre-XDR-TB | lineage2.1 | None | DRR130077 | Pre-XDR-TB | lineage2.1 | None | DRR188869 | HR-TB | lineage2.2.1 | None | DRR130140 | MDR-TB | lineage2.2.1 | None | DRR130217 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794363 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043757 | MDR-TB | lineage2.2.1 | None | ERR3287480 | MDR-TB | lineage4.3.4.2 | pe | ERR3287571 | MDR-TB | lineage4.1.2.1 | None | ERR067691 | MDR-TB | lineage4.2.1 | ru | ERR3287505 | MDR-TB | lineage4 | None | ERR3287669 | MDR-TB | lineage4.3.4.2 | pe | ERR3794382 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794391 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794403 | MDR-TB | lineage2.2.1 | None | ERR3794385 | MDR-TB | lineage2.2.1 | None | ERR3794389 | MDR-TB | lineage2.2.1 | None | ERR3794450 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794444 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794445 | MDR-TB | lineage2.2.1 | None | ERR3794446 | MDR-TB | lineage2.2.1 | None | ERR3794474 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794467 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794479 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794475 | MDR-TB | lineage2.2.1 | None | ERR3794512 | MDR-TB | lineage2.2.1 | None | ERR3794484 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794518 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794548 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794520 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794526 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794551 | MDR-TB | lineage2.2.1 | None | ERR4797875 | MDR-TB | lineage4.1.2.1 | in | ERR4553922 | MDR-TB | None | ERR4553905 | MDR-TB | None | ERR4798926 | MDR-TB | lineage4.1.2.1;lineage1.1.2 | in | ERR4800519 | MDR-TB | lineage4.1.2.1 | in | ERR5865043 | MDR-TB | lineage4.3.3 | None | SRR10303316 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430344 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430394 | MDR-TB | lineage2.2.1 | None | ERR4798952 | MDR-TB | lineage4.1.2.1;lineage1.1.2 | in | ERR4799059 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR5865589 | MDR-TB | lineage4.3.3 | None | ERR775335 | MDR-TB | lineage4.1.2.1 | pe | SRR10303341 | MDR-TB | lineage2.2.1 | None | SRR10808670 | Pre-XDR-TB | lineage4.3.2 | None |
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