Rv3197A - c.252A>C
Drug resistance types
188 Sensitive
2 RR-TB
26 HR-TB
35 MDR-TB
41 Pre-XDR-TB
4 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 12 |
| lineage4.3 | 1 |
| lineage2.2.1 | 112 |
| lineage2.1 | 3 |
| lineage4.8 | 14 |
| lineage4.1.1 | 3 |
| lineage3 | 26 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.1.1.3 | 6 |
| lineage2.2.2 | 9 |
| lineage4.1.2.1 | 13 |
| lineage4.5 | 6 |
| lineage1.1.2 | 13 |
| lineage1.1.1.1 | 8 |
| lineage4.3.3 | 14 |
| La3 | 2 |
| lineage1.2.1.2.1 | 17 |
| lineage4.8.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.6.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.4.2 | 5 |
| lineage2.2.1.2 | 1 |
| lineage1.2.2.2 | 4 |
| lineage4.3.2 | 1 |
| lineage3.1.2 | 4 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.9 | 4 |
| La1.2.BCG | 1 |
| lineage1.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage1.1.1 | 3 |
| lineage4.4.2 | 3 |
| lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.4 | 1 |
| lineage1.2.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 319 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25206918 | MDR-TB | lineage2.2.1.1 | None | SRR21732374 | Sensitive | lineage4.3 | None | SRR27450039 | Sensitive | lineage2.2.1 | None | SRR28119826 | Other | lineage2.2.1 | None | SRR27069429 | MDR-TB | lineage2.2.1 | None | SRR28868379 | Sensitive | lineage2.1 | None | SRR28868491 | Sensitive | lineage2.2.1 | None | SRR16088307 | Sensitive | lineage4.8 | None | SRR28859949 | RR-TB | lineage4.1.1 | None | SRR28351340 | HR-TB | lineage3 | None | SRR25827529 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | SRR24256051 | MDR-TB | lineage2.2.1 | None | SRR28868805 | Sensitive | lineage4.1.1.3 | None | SRR24083626 | Sensitive | lineage2.2.1.1 | None | SRR27450049 | Sensitive | lineage2.2.2 | None | SRR26112586 | Other | lineage2.2.1 | None | SRR22251654 | Sensitive | lineage4.1.2.1 | None | ERR9124940 | Sensitive | lineage4.8 | None | SRR27450445 | Other | lineage2.2.1 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | SRR25206910 | XDR-TB | lineage4.5 | None | SRR27450013 | Sensitive | lineage1.1.2 | None | SRR24709946 | HR-TB | lineage2.2.1 | None | SRR22251321 | Sensitive | lineage2.2.1 | None | SRR21732555 | Other | lineage1.1.1.1 | None | SRR22251934 | Sensitive | lineage2.2.1.1 | None | SRR27450645 | MDR-TB | lineage3 | None | SRR24256031 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450171 | Sensitive | lineage2.2.1 | None | SRR21733244 | Sensitive | lineage2.2.1 | None | SRR27450461 | Sensitive | lineage2.2.1 | None | SRR26112405 | Sensitive | lineage4.3.3 | None | SRR28858579 | Sensitive | La3 | None | SRR23861942 | MDR-TB | lineage2.2.1 | None | SRR28868840 | Other | lineage1.1.2 | None | SRR26112749 | MDR-TB | lineage4.1.2.1 | None | SRR28858425 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR27450517 | HR-TB | lineage1.2.1.2.1 | None | SRR28868597 | Sensitive | lineage2.2.1 | None | SRR28868830 | Sensitive | lineage1.2.1.2.1 | None | SRR24710025 | Other | lineage2.2.1 | None | SRR28119732 | HR-TB | lineage4.5 | None | SRR28860152 | Sensitive | lineage2.2.1 | None | SRR23861811 | Sensitive | lineage4.3.3 | None | SRR27450457 | HR-TB | lineage2.2.1 | None | SRR28859639 | Sensitive | lineage4.1.2.1 | None | DRR473947 | Sensitive | lineage4.5 | None | SRR28119715 | MDR-TB | lineage2.2.1 | None | SRR29016872 | MDR-TB | lineage2.2.1 | None | SRR28858585 | Sensitive | lineage1.1.2 | None | SRR16087898 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732896 | Sensitive | lineage1.1.2 | None | SRR26112744 | Sensitive | lineage4.1.1 | None | SRR28868847 | Sensitive | lineage1.2.1.2.1 | None | SRR28859784 | Sensitive | lineage2.2.1 | None | SRR28868599 | HR-TB | lineage2.2.1 | None | SRR28868385 | Sensitive | lineage3 | None | SRR28868863 | Sensitive | lineage2.2.1 | None | SRR24799187 | Sensitive | lineage4.8.1 | None | SRR28868874 | Sensitive | lineage2.2.1 | None | SRR25827564 | Sensitive | lineage3 | None | SRR27450016 | Sensitive | lineage1.1.2 | None | SRR28858481 | Sensitive | lineage1.2.1.2.1 | None | SRR28859604 | Other | lineage4.3.3 | None | SRR28868654 | Sensitive | lineage4.8 | None | SRR28119791 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887681 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868477 | Sensitive | lineage4.1.1.1 | None | SRR24709919 | MDR-TB | lineage2.2.1 | None | SRR27450235 | Sensitive | lineage4.4.1.1 | None | SRR28119837 | HR-TB | lineage2.2.1 | None | SRR28868738 | Sensitive | lineage2.2.1 | None | SRR27450402 | Sensitive | lineage4.5 | None | SRR28868820 | Sensitive | lineage2.1 | None | SRR25666648 | Sensitive | lineage4.1.2.1 | None | SRR21733125 | Sensitive | lineage1.2.1.2.1 | None | SRR28044961 | Sensitive | lineage4.8 | None | SRR28868510 | Sensitive | lineage1.1.1.1 | None | SRR28046144 | MDR-TB | lineage2.2.1 | None | SRR27069374 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044614 | Sensitive | lineage3 | None | SRR28045557 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861733 | Sensitive | lineage4.2.1 | None | SRR25628581 | Sensitive | lineage2.2.1.1 | None | SRR28119720 | MDR-TB | lineage2.2.1 | None | SRR28119733 | Sensitive | lineage2.2.1 | None | SRR28119786 | MDR-TB | lineage2.2.2 | None | SRR21733210 | Sensitive | lineage3 | None | SRR26111981 | Sensitive | lineage2.2.1 | None | SRR28868768 | Sensitive | lineage4.6.1.1 | None | SRR29093231 | Sensitive | lineage4.1.1.3 | None | SRR23861969 | Pre-XDR-TB | lineage2.2.1 | None | SRR28859859 | Sensitive | lineage1.1.3.1 | None | SRR27069427 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450540 | Sensitive | lineage4.3.3 | None | SRR23861967 | Sensitive | lineage2.2.1 | None | SRR26112806 | Other | La1.8.1 | None | SRR26112589 | Sensitive | lineage4.3.4.1 | None | SRR25827883 | Pre-XDR-TB | lineage3;lineage4.2.2.2 | None | SRR21733254 | Sensitive | lineage1.1.2 | None | SRR24083704 | Sensitive | lineage2.2.1 | None | SRR28859680 | Sensitive | lineage3 | None | SRR25827875 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | SRR28046042 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119763 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351565 | HR-TB | lineage3 | None | SRR27450433 | Sensitive | lineage3 | None | SRR25207181 | XDR-TB | lineage2.2.1.1 | None | SRR27450104 | Sensitive | lineage4.3.4.2.1 | None | SRR24256203 | Pre-XDR-TB | lineage4.3.3 | None | SRR24083742 | Sensitive | lineage2.2.1.1 | None | SRR28119759 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732812 | Sensitive | lineage2.2.2 | None | SRR26112574 | Other | La3 | None | SRR28860130 | HR-TB | lineage4.3.4.2 | None | SRR28868839 | Sensitive | lineage1.2.1.2.1 | None | SRR28858727 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868734 | Sensitive | lineage3 | None | SRR28868772 | Sensitive | lineage1.2.1.2.1 | None | SRR25666653 | Sensitive | lineage4.1.2.1 | None | SRR27450217 | Sensitive | lineage2.2.1.1 | None | SRR27450650 | Other | lineage2.2.1 | None | SRR28868793 | Sensitive | lineage1.2.1.2.1 | None | SRR28858668 | Sensitive | lineage2.2.1 | None | SRR28868724 | HR-TB | lineage2.2.1 | None | SRR28119742 | Pre-XDR-TB | lineage2.2.1 | None | SRR27450214 | Sensitive | lineage2.2.1.2 | None | SRR28045923 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251697 | Sensitive | lineage4.1.1.3 | None | SRR25827327 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251323 | Sensitive | lineage4.1.1.3 | None | SRR21732878 | Sensitive | lineage2.2.1 | None | SRR28868800 | Sensitive | lineage1.2.1.2.1 | None | SRR25206922 | MDR-TB | lineage2.2.1 | None | SRR28858736 | Sensitive | lineage2.2.1 | None | SRR21887677 | MDR-TB | lineage2.2.1 | None | SRR28240031 | Sensitive | lineage4.3.3 | None | SRR28858596 | Sensitive | lineage3 | None | SRR28868598 | Other | lineage1.2.2.2 | None | SRR21732827 | Sensitive | lineage4.3.4.2 | None | SRR26112746 | Sensitive | lineage4.1.2.1 | None | SRR28859594 | Sensitive | lineage4.3.2 | None | SRR28868665 | Sensitive | lineage4.3.4.2 | None | SRR28868552 | Sensitive | lineage2.2.1 | None | SRR28868802 | Sensitive | lineage3.1.2 | None | SRR24256110 | MDR-TB | lineage2.2.1 | None | SRR23861960 | Sensitive | lineage4.3.3 | None | SRR28868481 | Sensitive | lineage3.1.2 | None | SRR26112358 | Sensitive | lineage1.2.2.2 | None | SRR22251943 | Sensitive | lineage1.2.1.2.1 | None | SRR25207066 | Pre-XDR-TB | lineage2.2.1 | None | SRR25666652 | Sensitive | lineage4.1.2.1 | None | SRR26112202 | HR-TB | lineage1.1.2 | None | SRR21733056 | RR-TB | lineage1.2.1.2.1 | None | SRR27450014 | Sensitive | lineage1.2.1.2.1 | None | SRR24083728 | Sensitive | lineage2.2.1 | None | SRR25827776 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | None | SRR28858529 | Other | lineage3.1 | None | SRR28119817 | Sensitive | lineage2.2.1 | None | SRR28868582 | Sensitive | lineage4.8 | None | SRR29094374 | MDR-TB | lineage4.1.1.2 | None | SRR28868602 | Sensitive | lineage1.2.1.2.1 | None | SRR28868544 | Other | lineage2.2.1 | None | SRR28868837 | Sensitive | lineage4.4 | None | SRR28860064 | Sensitive | lineage4.3.4.2 | None | SRR28859838 | Sensitive | lineage4.3.4.2 | None | SRR28858506 | Sensitive | lineage4.3.3 | None | SRR16088372 | Sensitive | lineage4.8 | None | SRR27450562 | Sensitive | lineage2.2.1 | None | SRR26397813 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207185 | MDR-TB | lineage2.2.1 | None | SRR28868836 | Pre-XDR-TB | lineage4.8 | None | SRR28859916 | Sensitive | lineage4.1.1.3 | None | SRR28859640 | Sensitive | lineage2.2.2 | None | SRR24256141 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207035 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119782 | Sensitive | lineage4.5 | None | SRR28859649 | HR-TB | lineage1.2.1.2.1 | None | SRR22251125 | Sensitive | lineage2.2.1 | None | SRR21732801 | Sensitive | lineage1.1.3.3 | None | SRR21732955 | MDR-TB | lineage1.1.2 | None | SRR23862148 | Sensitive | lineage4.8 | None | SRR26112548 | Sensitive | lineage4.9 | None | SRR28859810 | Sensitive | lineage4.9 | None | SRR21733267 | HR-TB | lineage2.2.1 | None | SRR28119834 | HR-TB | lineage2.2.2 | None | SRR28044593 | Sensitive | lineage4.4 | None | SRR21732987 | Sensitive | lineage3.1.2 | None | SRR28045678 | Other | lineage2.2.1 | None | SRR28498448 | XDR-TB | lineage4.2.1 | None | SRR28045500 | HR-TB | lineage3 | None | SRR27449963 | Sensitive | lineage3 | None | SRR24083706 | Sensitive | lineage2.2.1.1 | None | SRR24083710 | Sensitive | lineage2.2.1 | None | SRR28045861 | MDR-TB | lineage2.2.1 | None | SRR21733045 | Sensitive | lineage2.2.1 | None | SRR21732567 | Sensitive | lineage2.2.1 | None | SRR16088588 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732770 | Sensitive | lineage2.2.1.1 | None | SRR27450009 | Sensitive | lineage4.8 | None | SRR28859600 | Sensitive | lineage2.2.1 | None | SRR28119797 | Other | lineage2.2.1 | None | SRR22251129 | HR-TB | lineage1.1.1.1 | None | SRR22251983 | Sensitive | lineage2.2.1 | None | SRR24256007 | MDR-TB | lineage4.3.3 | None | SRR28045471 | Sensitive | lineage1.1.2 | None | SRR21732816 | HR-TB | lineage3 | None | SRR28858471 | MDR-TB | lineage2.2.1 | None | SRR25666656 | Sensitive | lineage4.1.2.1 | None | SRR27450017 | Sensitive | lineage1.1.2 | None | SRR27450250 | Other | La1.2.BCG | None | SRR21887709 | Pre-XDR-TB | lineage2.2.2 | None | SRR27450435 | Sensitive | lineage3 | None | SRR27069432 | MDR-TB | lineage2.2.1 | None | SRR26558620 | MDR-TB | lineage2.2.1 | None | SRR28119836 | Sensitive | lineage2.2.1.1 | None | SRR26112042 | Sensitive | lineage2.2.1.1 | None | SRR28045487 | HR-TB | lineage1.2.2 | None | SRR28045640 | Pre-XDR-TB | lineage2.2.1 | None | SRR24799221 | Sensitive | lineage1.2.2.2 | None | SRR16088305 | HR-TB | lineage4.2.1 | None | SRR28119808 | Sensitive | lineage2.2.1 | None | SRR22251584 | Sensitive | lineage1.2.2.2 | None | SRR27450372 | HR-TB | lineage4.2.2 | None | SRR24083665 | Sensitive | lineage1.1.1 | None | SRR27450341 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868482 | Other | lineage3 | None | SRR28859595 | Sensitive | lineage4.8 | None | SRR27450019 | Sensitive | lineage3 | None | SRR28860126 | Sensitive | lineage4.8 | None | SRR26112423 | HR-TB | lineage1.2.1.2.1 | None | SRR28046114 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868411 | Sensitive | lineage4.4.2 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21733136 | Sensitive | lineage1.2.1.2.1 | None | SRR22251647 | Sensitive | lineage4.3.3 | None | SRR28119735 | Other | lineage2.2.1 | None | SRR28498445 | MDR-TB | lineage2.2.1 | None | SRR28868664 | Sensitive | lineage1.2.1.2.1 | None | SRR27450383 | Sensitive | lineage4.1.1.1 | None | SRR28859584 | Sensitive | lineage4.3.3 | None | SRR25666651 | Sensitive | lineage4.1.2.1 | None | SRR24710240 | MDR-TB | lineage2.2.1 | None | SRR28868433 | Other | lineage3 | None | SRR28119725 | HR-TB | lineage2.2.2 | None | SRR28868807 | Sensitive | lineage1.1.3.1;lineage2.2.1 | None | SRR28868560 | Sensitive | lineage3.1.2.1 | None | SRR22251836 | Sensitive | lineage2.2.1 | None | SRR28868402 | Sensitive | lineage3 | None | SRR28858426 | Other | lineage4.1.1.3 | None | SRR24083690 | Sensitive | lineage4.3.3 | None | SRR24083647 | Sensitive | lineage1.1.1.1 | None | SRR28859790 | Sensitive | lineage4.1.4 | None | SRR28119762 | Sensitive | lineage2.2.1 | None | SRR28868553 | Sensitive | lineage1.1.1.1 | None | SRR28119824 | Sensitive | lineage2.2.1 | None | SRR28119795 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119835 | MDR-TB | lineage2.2.1 | None | SRR24255993 | MDR-TB | lineage4.3.3 | None | SRR25666657 | Sensitive | lineage4.1.2.1 | None | SRR21733091 | Sensitive | lineage3 | None | SRR28119829 | Sensitive | lineage4.4.2 | None | SRR28868506 | Sensitive | lineage3 | None | SRR26112435 | Other | lineage3 | None | SRR28046065 | HR-TB | lineage3.1.2 | None | SRR21732893 | Sensitive | lineage1.2.1.2 | None | SRR21732999 | Sensitive | lineage2.2.1 | None | SRR28860030 | Sensitive | lineage4.1.1 | None | SRR28045417 | Sensitive | lineage3 | None | SRR28868366 | Sensitive | lineage4.8 | None | SRR27450018 | Sensitive | lineage2.2.1 | None | SRR28119810 | Sensitive | lineage2.2.1 | None | SRR28868585 | Sensitive | lineage1.1.1.1 | None | SRR28239985 | Other | lineage4.8 | None | SRR27450388 | Sensitive | lineage4.2.2.2 | None | SRR28868745 | Sensitive | lineage2.2.1 | None | SRR28858721 | MDR-TB | lineage2.2.1 | None | SRR21887673 | MDR-TB | lineage2.2.1 | None | SRR24083640 | Sensitive | lineage2.2.1 | None | SRR25827668 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR27449964 | Sensitive | lineage3 | None | SRR27450378 | Sensitive | lineage4.3.4.2.1 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR27450012 | Sensitive | lineage1.2.1.2 | None | SRR28868643 | Sensitive | lineage4.6.1.1 | None | SRR28868583 | Sensitive | lineage3 | None | SRR24710018 | HR-TB | lineage4.2.1 | None | SRR16088022 | HR-TB | lineage2.2.1 | None | SRR21733189 | Sensitive | lineage1.1.1 | None | SRR28868532 | Sensitive | lineage1.1.1 | None | SRR24083703 | Sensitive | lineage1.1.1.1 | None | SRR28119730 | Sensitive | lineage4.4.2 | None | SRR28045545 | HR-TB | lineage4.9 | None | SRR28860074 | Sensitive | lineage4.9 | None | SRR22251833 | Sensitive | lineage3 | None | SRR21732815 | Sensitive | lineage1.1.2 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR28046308 | Sensitive | lineage1.1.2 | None | SRR28119734 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045552 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045927 | XDR-TB | lineage2.2.1 | None | SRR25827788 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498595 | Sensitive | lineage4.3.3 | None | SRR28467020 | Pre-XDR-TB | lineage2.2.2 | None | SRR28119796 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045853 | Sensitive | lineage1.1.2 | None | SRR28119712 | MDR-TB | lineage2.2.1 | None | SRR25666640 | Sensitive | lineage4.1.2.1 | None | SRR21732337 | Sensitive | lineage4.8 | None | SRR27450460 | Sensitive | lineage2.2.1 | None | SRR24083719 | Sensitive | lineage1.1.1.1 | None | SRR26112230 | Sensitive | lineage2.1 | None | SRR25206921 | MDR-TB | lineage4.5 | None | SRR26112409 | Sensitive | lineage4.1.2.1 | None | SRR16088396 | MDR-TB | lineage2.2.1 | None | SRR27450439 | Other | lineage2.2.1 | None | SRR28868806 | Sensitive | lineage2.2.1 | None | SRR21732547 | MDR-TB | lineage4.1.2.1 | None |
|---|
