Rv3246c - c.-499C>G

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
42 Sensitive 2 RR-TB 7 HR-TB 16 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.2 61
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 2
lineage4.3.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 70
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10808449 Sensitive lineage2.2.2 None
SRR6480591 Sensitive lineage2.2.2 None
ERR9634250 Sensitive lineage2.2.2 None
ERR3273153 Pre-XDR-TB lineage2.2.2 None
SRR6480631 Sensitive lineage2.2.2 None
SRR22249369 Sensitive lineage2.2.2 None
SRR6480432 Sensitive lineage2.2.2 None
SRR10808867 Sensitive lineage2.2.2 None
SRR10808974 Sensitive lineage2.2.2 None
SRR10809122 Sensitive lineage2.2.2 None
SRR6480405 Sensitive lineage2.2.2 None
SRR21690209 Sensitive lineage2.2.2 None
SRR6480333 Sensitive lineage2.2.2 None
SRR21690800 Sensitive lineage2.2.2 None
SRR6480353 Sensitive lineage2.2.2 None
SRR6480519 MDR-TB lineage2.2.2 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3273112 Pre-XDR-TB lineage2.2.2 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR11068736 Sensitive lineage2.2.2 None
SRR10809124 MDR-TB lineage2.2.2 None
ERR3273108 Pre-XDR-TB lineage2.2.2 None
ERR3276034 Sensitive lineage2.2.2 nl
ERR3273122 MDR-TB lineage2.2.2 None
ERR3273158 MDR-TB lineage2.2.2 None
SRR10809196 Sensitive lineage2.2.2 None
ERR3273103 MDR-TB lineage2.2.2 None
SRR6480383 Sensitive lineage2.2.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6480410 Sensitive lineage2.2.2 None
SRR6480571 MDR-TB lineage2.2.2 None
ERR3273117 RR-TB lineage2.2.2 None
ERR3273142 MDR-TB lineage2.2.2 None
SRR6480417 Sensitive lineage2.2.2 None
SRR6480474 Sensitive lineage2.2.2 None
SRR6480407 Sensitive lineage2.2.2 None
ERR3273170 MDR-TB lineage2.2.2 None
SRR10809202 Sensitive lineage2.2.2 None
ERR9634293 Sensitive lineage2.2.2 None
SRR27450049 Sensitive lineage2.2.2 None
SRR6480483 Sensitive lineage2.2.2 None
SRR6480589 HR-TB lineage2.2.2 None
ERR3273160 MDR-TB lineage2.2.2;lineage4.4.1.1 None
ERR11043314 Sensitive lineage2.2.2 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9634280 Sensitive lineage2.2.2 None
SRR6480409 Sensitive lineage2.2.2 None
ERR3273099 MDR-TB lineage2.2.2 None
ERR3273186 MDR-TB lineage2.2.2 None
ERR11067550 Sensitive lineage2.2.2 None
SRR10808728 RR-TB lineage2.2.2 None
ERR11082355 HR-TB lineage4.3.3 None
SRR10809091 Sensitive lineage2.2.2 None
SRR10809042 Sensitive lineage2.2.2 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6480510 Sensitive lineage2.2.2 None
SRR10809173 Sensitive lineage2.2.2 None
SRR6480361 Sensitive lineage2.2.2 None
SRR10809206 Sensitive lineage2.2.2 None
SRR6480612 Sensitive lineage2.2.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6480493 Sensitive lineage2.2.2 None
ERR3273172 MDR-TB lineage2.2.2 None
SRR6480464 HR-TB lineage2.2.2 None
ERR3276089 Sensitive lineage2.2.2 nl
SRR10808791 MDR-TB lineage2.2.2 None
SRR10809167 Sensitive lineage2.2.2 None
SRR6480373 Sensitive lineage2.2.2 None
SRR10809092 Sensitive lineage2.2.2 None