lineage | Count |
---|---|
lineage1 | 1 |
lineage1.2.2.1 | 1 |
lineage3 | 2 |
lineage2.2.1 | 18 |
lineage2.2.1.1 | 4 |
lineage4.3.2.1 | 9 |
lineage3.1.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.8 | 2 |
lineage3.1.2 | 1 |
lineage4.1.2.1 | 8 |
lineage2.2 | 1 |
lineage4.1.2 | 2 |
lineage4.2.1 | 3 |
lineage1.1.2 | 1 |
lineage2.1 | 1 |
lineage4.3.2.1;lineage2.2.1 | 2 |
lineage4.6.1.2 | 2 |
spoligotype | Count |
---|---|
None | 60 |
ID | Drug resistance | Lineage | Country iso2 | SRR21735256 | Other | lineage1 | None | ERR181810 | Sensitive | lineage1.2.2.1 | mw | ERR11068661 | Sensitive | lineage3 | None | SRR21887735 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073759 | HR-TB | lineage2.2.1.1 | vn | SRR5067697 | HR-TB | lineage2.2.1 | vn | SRR5073680 | Other | lineage2.2.1 | vn | ERR2515759 | MDR-TB | lineage4.3.2.1 | za | ERR4818949 | Sensitive | lineage3.1.1 | None | SRR5067653 | Sensitive | lineage2.2.1 | vn | SRR1723842 | Pre-XDR-TB | lineage2.2.1 | cn | ERR257910 | Sensitive | lineage4.3.4.2 | nl | ERR4827911 | Sensitive | lineage2.2.1 | None | ERR4831793 | MDR-TB | lineage2.2.1.1 | vn | ERR4831471 | Pre-XDR-TB | lineage4.8 | pk | ERR4831745 | MDR-TB | lineage2.2.1.1 | None | ERR4831754 | HR-TB | lineage2.2.1.1 | vn | SRR6045796 | MDR-TB | lineage3.1.2 | None | ERR4831465 | Pre-XDR-TB | lineage4.8 | None | ERR4831594 | MDR-TB | lineage4.3.2.1 | None | ERR4872255 | MDR-TB | lineage4.1.2.1 | None | SRR1723889 | Sensitive | lineage2.2.1 | cn | SRR6831904 | MDR-TB | lineage2.2 | None | SRR6896402 | Sensitive | lineage4.1.2 | None | SRR6785460 | Sensitive | lineage4.2.1 | None | SRR6832500 | Other | lineage2.2.1 | None | SRR6832686 | Sensitive | lineage2.2.1 | None | SRR6981944 | Sensitive | lineage4.3.2.1 | None | SRR6824463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4024680 | Sensitive | lineage4.1.2.1 | None | DRR130206 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762332 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864922 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024809 | Sensitive | lineage4.1.2.1 | None | ERR4809162 | MDR-TB | lineage4.3.2.1 | None | ERR5864923 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864924 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865323 | Sensitive | lineage4.1.2.1 | None | ERR5987349 | MDR-TB | lineage4.3.2.1 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR6865596 | Sensitive | lineage4.1.2.1 | None | ERR7362032 | Sensitive | lineage1.1.2 | None | ERR7911021 | MDR-TB | lineage4.2.1 | md | ERR7737626 | MDR-TB | lineage2.2.1 | None | ERR11050018 | Sensitive | lineage4.1.2.1 | None | ERR7911125 | MDR-TB | lineage2.1 | vn | SRR18715460 | MDR-TB | lineage2.2.1 | None | ERR8699201 | MDR-TB | lineage4.3.2.1 | None | ERR9120051 | MDR-TB | lineage4.3.2.1 | None | SRR10303343 | MDR-TB | lineage4.3.2.1;lineage2.2.1 | None | SRR1173544 | MDR-TB | lineage4.6.1.2 | None | ERR9119647 | MDR-TB | lineage4.1.2.1 | None | ERR9120052 | MDR-TB | lineage4.3.2.1 | None | SRR10305620 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430396 | MDR-TB | lineage4.3.2.1;lineage2.2.1 | None | SRR1174313 | MDR-TB | lineage4.6.1.2 | None | SRR13423655 | HR-TB | lineage2.2.1 | None | SRR2101333 | Sensitive | lineage4.1.2 | None | SRR2100438 | Sensitive | lineage3 | None | SRR21240051 | Sensitive | lineage4.1.2.1 | None |
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