lineage | Count |
---|---|
lineage2.2.1 | 23 |
lineage4;lineage2.2.1 | 2 |
lineage4.7 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2.1 | 11 |
lineage4.1.1.1 | 1 |
lineage4.6.1.2 | 1 |
lineage4.3.3 | 3 |
lineage4.3.4.2 | 3 |
lineage4.3.4.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.2.1 | 3 |
lineage2.2.1.1 | 1 |
lineage2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage4.4 | 1 |
lineage4.2.2 | 2 |
lineage2.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8;lineage4.1.2.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | SRR6831710 | MDR-TB | lineage2.2.1 | None | ERR017785 | MDR-TB | lineage4;lineage2.2.1 | None | ERR6359079 | MDR-TB | lineage4.7 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR11466357 | Sensitive | lineage2.2.1 | None | ERR4195614 | Sensitive | lineage4.1.2.1 | None | ERR4809086 | Sensitive | lineage4.1.1.1 | za | ERR6358785 | MDR-TB | lineage4.6.1.2 | None | ERR019859 | MDR-TB | lineage4;lineage2.2.1 | None | ERR10465985 | Sensitive | lineage4.1.2.1 | None | ERR8665907 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866183 | Sensitive | lineage4.3.3 | None | SRR16088123 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255979 | Sensitive | lineage4.7 | None | ERR9121740 | Sensitive | lineage4.1.2.1 | None | SRR10851652 | Sensitive | lineage4.3.4.2 | None | ERR9786480 | Sensitive | lineage4.3.4.1 | None | ERR9992840 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR14782612 | Other | lineage2.2.1 | None | SRR14782376 | HR-TB | lineage4.2.1 | None | SRR12931805 | Sensitive | lineage4.3.4.2 | None | SRR14801924 | MDR-TB | lineage2.2.1 | None | SRR15316551 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399219 | HR-TB | lineage4.3.4.2 | None | SRR15368992 | Sensitive | lineage2.2.1 | None | SRR16097560 | Sensitive | lineage4.1.2.1 | None | SRR21277304 | Sensitive | lineage2.2.1.1 | None | SRR18715306 | MDR-TB | lineage2.2.1 | None | SRR19355499 | RR-TB | lineage2 | None | SRR26112815 | Other | lineage4.1.1.3 | None | SRR22757400 | MDR-TB | lineage2.2.1 | None | SRR21747024 | XDR-TB | lineage2.2.1 | None | SRR22528524 | Sensitive | lineage4.1.1 | None | SRR25207287 | MDR-TB | lineage2.2.1 | None | SRR24799199 | Sensitive | lineage4.4 | None | SRR26399322 | Sensitive | lineage4.1.2.1 | None | SRR5065690 | Sensitive | lineage4.2.2 | vn | SRR28240107 | Sensitive | lineage4.2.1 | None | ERR108148 | Sensitive | lineage2.2.1 | za | ERR2041693 | MDR-TB | lineage4.1.2.1 | rs | ERR1035163 | Sensitive | lineage4.3.3 | sa | ERR108147 | Sensitive | lineage2.2.1 | za | SRR23310847 | MDR-TB | lineage2.2 | None | ERR3275421 | Sensitive | lineage4.1.2.1 | nl | SRR5152936 | MDR-TB | lineage2.2.1 | None | SRR6152999 | Sensitive | lineage4.4.1.1 | ca | SRR23310843 | MDR-TB | lineage4.2.1 | None | SRR5067621 | Sensitive | lineage4.2.2 | vn | SRR5067243 | HR-TB | lineage2.2.1 | vn | ERR552274 | MDR-TB | lineage2.2.1 | uz | ERR1465756 | Sensitive | lineage4.1.2.1 | ch | SRR23339953 | Sensitive | lineage4.8;lineage4.1.2.1 | None | ERR4827681 | Sensitive | lineage2.2.1 | None | ERR4827421 | Sensitive | lineage2.2.1 | None | ERR2446358 | Sensitive | lineage4.1.2.1 | nl | ERR3132097 | HR-TB | lineage4.8 | None | ERR108450 | MDR-TB | lineage2.2.1 | ru | ERR234639 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2517430 | Sensitive | lineage4.1.2.1 | nl | SRR6257096 | MDR-TB | lineage2.2.1 | None | SRR6832694 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813539 | Sensitive | lineage4.1.2.1 | pe | SRR6785279 | MDR-TB | lineage4.3.3 | None |
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