Rv3261 - c.-196delA


Drug resistance types
57 Sensitive 2 RR-TB 10 HR-TB 94 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage4.6.5 167
lineage1.2.1.1 1
lineage3 30
La3 1
lineage4.1.2.1 20
La2 1
lineage4.5 7
lineage4.1.4 1
lineage2.2.1;lineage3 3
lineage4.1.2 1
lineage3.1.2 7
lineage4.6.1.1 1
lineage3.1.1 1
lineage1.2.1.2.1 1
lineage4.2.1.1 1
lineage4.6.1.2;lineage4.6.5 1
spoligotype Counts
spoligotype Count
None 259
Geographic prevalence
Country level data for this variant is available for 52 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21277706 Sensitive lineage2.2.1 None
SRR21690970 Other lineage4.6.5 None
ERR2516969 MDR-TB lineage4.6.5 gb
ERR4820065 Sensitive lineage1.2.1.1 None
SRR18213728 Other lineage3 None
SRR21279439 Sensitive lineage2.2.1 None
SRR27332284 Other lineage4.6.5 None
ERR2517453 Other lineage4.6.5 nl
ERR11081318 MDR-TB lineage4.6.5 None
ERR2659153 Other La3 None
SRR27332342 Other lineage4.6.5 None
ERR4816728 Sensitive lineage3 gb
ERR3275855 Other lineage4.6.5 nl
ERR11081207 MDR-TB lineage4.6.5 None
ERR2120259 MDR-TB lineage4.6.5 None
SRR7829594 MDR-TB lineage4.6.5 None
ERR2120296 Other lineage4.6.5 None
ERR2120283 MDR-TB lineage4.6.5 None
SRR21277813 Sensitive lineage2.2.1 None
ERR2503496 Sensitive lineage4.1.2.1 fi
SRR21690303 HR-TB lineage4.6.5 None
SRR13888775 Other La2 None
ERR7801176 RR-TB lineage4.6.5 None
ERR2677450 MDR-TB lineage4.6.5 de
ERR4818444 Other lineage4.6.5 None
SRR6045177 HR-TB lineage3 gb
ERR4829886 Other lineage4.6.5 it
ERR3470650 Other lineage4.6.5 None
ERR11044588 MDR-TB lineage4.6.5 None
ERR10465861 Other lineage4.6.5 None
SRR14164359 Sensitive lineage4.1.2.1 None
SRR1723934 MDR-TB lineage4.5 None
ERR2120286 MDR-TB lineage4.6.5 None
ERR1023376 Other lineage4.6.5 None
ERR2120247 MDR-TB lineage4.6.5 None
ERR11050867 MDR-TB lineage4.6.5 None
ERR2120272 Other lineage4.6.5 None
ERR9125562 Other lineage4.6.5 None
ERR2120282 MDR-TB lineage4.6.5 None
SRR21662753 Other lineage4.5 None
SRR7069928 Other lineage4.6.5 None
ERR11068100 Sensitive lineage4.5 None
ERR2515070 Sensitive lineage3 gb
ERR2653016 HR-TB lineage4.1.4 None
ERR2120295 MDR-TB lineage4.6.5 None
ERR3275928 Other lineage4.6.5 nl
SRR6824591 MDR-TB lineage4.5 cn
ERR2120278 HR-TB lineage4.6.5 None
SRR7069382 Other lineage4.6.5 None
ERR11044170 MDR-TB lineage4.6.5 None
ERR2120280 Other lineage4.6.5 None
ERR2120277 Other lineage4.6.5 None
ERR2120292 MDR-TB lineage4.6.5 None
SRR26800485 Other lineage4.6.5 None
ERR2120299 Other lineage4.6.5 None
SRR5818645 Other lineage4.6.5 dj
ERR2503527 Sensitive lineage4.1.2.1 fi
SRR25827399 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR2120287 MDR-TB lineage4.6.5 None
SRR14781846 Sensitive lineage4.1.2 None
SRR14165045 Sensitive lineage4.1.2.1 None
SRR2100924 Other lineage4.6.5 None
ERR2120302 Other lineage4.6.5 None
ERR11081348 MDR-TB lineage4.6.5 None
ERR2120257 MDR-TB lineage4.6.5 None
ERR4828797 Other lineage4.6.5 None
ERR2791545 Sensitive lineage4.1.2.1 None
ERR11043420 Other lineage4.6.5 None
ERR2120284 Other lineage4.6.5 None
SRR7069684 Other lineage4.6.5 None
SRR5818574 MDR-TB lineage4.6.5 dj
ERR2516289 MDR-TB lineage4.6.5 be
SRR25827539 Sensitive lineage3.1.2 None
SRR21277112 Sensitive lineage2.2.1 None
SRR7069705 Sensitive lineage3 None
ERR688009 Sensitive lineage3 None
ERR11044129 MDR-TB lineage4.6.5 None
ERR2120264 MDR-TB lineage4.6.5 None
ERR2513617 Other lineage4.6.5 gb
ERR11043963 Sensitive lineage4.5 None
ERR11465184 Other lineage4.6.5 None
ERR4822294 MDR-TB lineage4.6.5 None
ERR6358849 MDR-TB lineage4.6.1.1 None
ERR4815152 Other lineage4.6.5 None
ERR4817024 HR-TB lineage4.6.5 None
ERR2517259 MDR-TB lineage4.6.5 nl
ERR2120289 MDR-TB lineage4.6.5 None
SRR28044448 Other lineage2.2.1 None
SRR28044422 Sensitive lineage3.1.2 None
SRR28044651 Sensitive lineage3 None
ERR4797242 Sensitive lineage3 in
SRR3082076 MDR-TB lineage4.6.5 None
SRR3085338 MDR-TB lineage4.6.5 None
ERR11043111 MDR-TB lineage4.6.5 None
SRR21732062 Other lineage4.6.5 None
ERR4828873 MDR-TB lineage4.6.5 None
ERR11049438 MDR-TB lineage4.6.5 None
ERR9285995 Other lineage4.6.5 None
ERR11050065 Other lineage4.6.5 None
ERR2120297 Other lineage4.6.5 None
ERR2503507 Sensitive lineage4.1.2.1 fi
ERR4821935 Other lineage4.6.5 gb
ERR3275721 Other lineage4.6.5 nl
SRR7070162 Other lineage4.6.5 None
ERR9286020 Sensitive lineage3.1.1 None
ERR2120291 MDR-TB lineage4.6.5 None
SRR7069110 Other lineage4.6.5 None
ERR11067359 Other lineage4.6.5 None
ERR11043537 MDR-TB lineage4.6.5 None
SRR25827458 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR2653234 RR-TB lineage4.1.2.1 None
SRR21239826 Sensitive lineage4.1.2.1 None
SRR3085337 MDR-TB lineage4.6.5 None
ERR11044475 MDR-TB lineage4.6.5 None
SRR14164908 Sensitive lineage4.1.2.1 None
ERR4796807 MDR-TB lineage3 in
SRR12420291 Other lineage2.2.1 None
ERR386896 Other lineage4.6.5 None
ERR4829144 Pre-XDR-TB lineage3 pk
ERR2120276 Other lineage4.6.5 None
SRR21279369 Sensitive lineage2.2.1 None
ERR10225429 Pre-XDR-TB lineage3 None
ERR4829100 MDR-TB lineage4.6.5 dj
ERR11081160 MDR-TB lineage4.6.5 None
ERR4815063 Other lineage3 gb
ERR4829377 MDR-TB lineage4.6.5 it
SRR22249811 Sensitive lineage3 None
SRR21277157 Sensitive lineage2.2.1 None
ERR2120285 Other lineage4.6.5 None
ERR2120265 MDR-TB lineage4.6.5 None
ERR11068067 MDR-TB lineage4.6.5 None
ERR11043110 MDR-TB lineage4.6.5 None
ERR11465185 Sensitive lineage4.6.5 None
SRR21279409 Sensitive lineage2.2.1 None
ERR386822 Other lineage3 None
ERR11081093 MDR-TB lineage4.6.5 None
ERR4820865 MDR-TB lineage4.6.5 gb
ERR2120248 MDR-TB lineage4.6.5 None
SRR15315933 MDR-TB lineage2.2.1 None
SRR21690705 Other lineage4.6.5 None
SRR5818633 MDR-TB lineage4.6.5 dj
SRR5818629 Other lineage4.6.5 dj
ERR2120274 MDR-TB lineage4.6.5 None
ERR387000 Other lineage3 None
ERR11043121 MDR-TB lineage4.6.5 None
SRR21732607 Other lineage4.6.5 None
ERR2503512 Sensitive lineage4.1.2.1 fi
ERR11044069 MDR-TB lineage4.6.5 None
SRR25827461 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR2517507 Other lineage4.6.5 nl
ERR11043980 Other lineage4.6.5 None
SRR25827523 Sensitive lineage3.1.2 None
SRR21728327 Other lineage4.6.5 None
SRR22251920 Sensitive lineage1.2.1.2.1 None
ERR2120275 MDR-TB lineage4.6.5 None
ERR11082694 MDR-TB lineage4.6.5 None
ERR4818395 Sensitive lineage3 gb
SRR7069848 Other lineage4.6.5 None
ERR4828796 HR-TB lineage4.6.5 None
SRR14164492 Sensitive lineage4.1.2.1 None
ERR2120301 Other lineage4.6.5 None
ERR11081049 MDR-TB lineage4.6.5 None
ERR5897085 Pre-XDR-TB lineage2.2.1 None
SRR5818665 Other lineage4.6.5 dj
ERR11775862 Other lineage4.6.5 None
SRR17832803 Sensitive lineage3.1.2 None
SRR21690226 MDR-TB lineage4.6.5 None
ERR2503538 HR-TB lineage4.1.2.1 fi
SRR14164819 Sensitive lineage4.1.2.1 None
ERR2517024 MDR-TB lineage3 gb
SRR10306017 MDR-TB lineage4.5 None
SRR22251812 Sensitive lineage3 None
ERR11049467 MDR-TB lineage4.6.5 None
ERR11082796 Other lineage4.6.5 None
ERR4831324 MDR-TB lineage4.6.5 de
SRR21690769 Other lineage4.6.5 None
SRR25827557 Sensitive lineage3.1.2 None
ERR2120266 MDR-TB lineage4.6.5 None
ERR11043614 MDR-TB lineage4.6.5 None
SRR15014646 MDR-TB lineage3 None
ERR2503457 Sensitive lineage4.1.2.1 fi
ERR6397159 Other lineage4.6.5 None
ERR4828826 MDR-TB lineage4.6.5 it
ERR2120267 MDR-TB lineage4.6.5 None
ERR11044454 Other lineage4.6.5 None
SRR21276914 MDR-TB lineage2.2.1 None
ERR2120268 MDR-TB lineage4.6.5 None
ERR351890 Other lineage3 None
ERR2120270 MDR-TB lineage4.6.5 None
ERR7801175 HR-TB lineage4.6.5 None
ERR2503444 Sensitive lineage4.1.2.1 fi
ERR2120269 MDR-TB lineage4.6.5 None
ERR2120290 MDR-TB lineage4.6.5 None
ERR2120300 Other lineage4.6.5 None
ERR2791561 Sensitive lineage4.1.2.1 None
ERR4828839 MDR-TB lineage4.6.5 None
SRR24673512 MDR-TB lineage2.2.1 None
ERR4829436 Other lineage4.6.5 it
SRR7069613 Other lineage4.6.5 None
SRR21279373 Sensitive lineage2.2.1 None
ERR11068123 Sensitive lineage4.2.1.1 None
SRR18213916 Other lineage4.6.5 None
ERR2120246 MDR-TB lineage4.6.5 None
SRR5818696 MDR-TB lineage4.6.5 dj
ERR2503487 Sensitive lineage4.1.2.1 fi
ERR2120279 HR-TB lineage4.6.5 None
SRR25827531 Sensitive lineage3.1.2 None
ERR6358721 MDR-TB lineage4.6.1.2;lineage4.6.5 None
ERR1034577 Sensitive lineage3 pk
ERR4798961 Sensitive lineage3 in
SRR2101228 Other lineage3 None
SRR21689667 Other lineage4.6.5 None
ERR11050620 Other lineage4.6.5 None
ERR11081688 MDR-TB lineage4.6.5 None
ERR11050618 Other lineage4.6.5 None
ERR2120262 MDR-TB lineage4.6.5 None
ERR4829104 MDR-TB lineage4.6.5 dj
ERR4822245 Other lineage3 gb
SRR26800463 Other lineage4.6.5 None
ERR11044102 MDR-TB lineage4.6.5 None
ERR9117701 MDR-TB lineage4.6.5 None
ERR11043665 MDR-TB lineage4.6.5 None
ERR2503522 Sensitive lineage4.1.2.1 fi
SRR7069269 Other lineage4.6.5 None
SRR21722055 Other lineage4.6.5 None
ERR11043538 MDR-TB lineage4.6.5 None
SRR17832809 Sensitive lineage3.1.2 None
ERR2515056 Sensitive lineage3 gb
SRR21689730 Other lineage4.6.5 None
ERR2120249 MDR-TB lineage4.6.5 None
SRR3082086 MDR-TB lineage4.6.5 None
ERR2120293 MDR-TB lineage4.6.5 None
SRR16058163 Other lineage4.6.5 None
ERR2120294 MDR-TB lineage4.6.5 None
ERR4828798 HR-TB lineage4.6.5 None
ERR4797588 MDR-TB lineage3 None
SRR7068992 Sensitive lineage3 None
SRR6964506 MDR-TB lineage3 None
ERR4828994 MDR-TB lineage4.6.5 it
ERR2120281 Other lineage4.6.5 None
ERR4830795 MDR-TB lineage4.6.5 et
ERR2179647 MDR-TB lineage4.5 None
SRR21661626 Other lineage4.6.5 None
SRR21732416 Other lineage4.6.5 None
SRR21691160 Other lineage4.6.5 None
ERR2503554 Sensitive lineage4.1.2.1 fi
ERR4828980 MDR-TB lineage4.6.5 None
ERR2120271 Other lineage4.6.5 None
SRR15368802 Sensitive lineage2.2.1 None
ERR2120288 MDR-TB lineage4.6.5 None
ERR2503361 Sensitive lineage4.1.2.1 None
ERR278537 Other lineage4.6.5 None
ERR3275959 Other lineage4.6.5 nl
ERR11044365 MDR-TB lineage4.6.5 None
SRR21658388 Other lineage4.6.5 None
SRR22251578 Sensitive lineage3 None
ERR2120298 Other lineage4.6.5 None
SRR7069253 Other lineage4.6.5 None
SRR28045898 Sensitive lineage3 None