Rv3261 - c.-196delA

Drug resistance types
44 Sensitive 3 RR-TB 6 HR-TB 67 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.6.5 100
lineage3 23
lineage4.5 7
lineage2.2.1 12
lineage4.6.1.1 1
lineage4.6.5;lineage4.6.1.2 1
lineage3.1.1 2
lineage4.1.2.1 18
La2 1
lineage3.1.2 2
lineage4.2.1.1 1
lineage1.2.1.1 1
lineage4.1.4 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 172
Geographic prevalence
Country level data for this variant is available for 53 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
SRR7829594 MDR-TB lineage4.6.5 None
ERR11043121 MDR-TB lineage4.6.5 None
ERR11049048 Other lineage4.6.5 None
ERR11049049 Other lineage4.6.5 None
ERR1023376 Other lineage4.6.5 None
ERR1034577 Sensitive lineage3 pk
ERR10465861 Other lineage4.6.5 None
ERR11043110 MDR-TB lineage4.6.5 None
ERR10225429 Pre-XDR-TB lineage3 None
ERR11043111 MDR-TB lineage4.6.5 None
ERR11043537 MDR-TB lineage4.6.5 None
ERR11043420 Other lineage4.6.5 None
ERR11043538 MDR-TB lineage4.6.5 None
ERR11043614 MDR-TB lineage4.6.5 None
ERR11043963 Sensitive lineage4.5 None
ERR11043665 MDR-TB lineage4.6.5 None
ERR11044365 MDR-TB lineage4.6.5 None
ERR11044069 MDR-TB lineage4.6.5 None
ERR11044129 MDR-TB lineage4.6.5 None
ERR11044170 MDR-TB lineage4.6.5 None
ERR11043980 Other lineage4.6.5 None
ERR11044102 MDR-TB lineage4.6.5 None
ERR11044475 MDR-TB lineage4.6.5 None
ERR11044454 Other lineage4.6.5 None
ERR11044588 MDR-TB lineage4.6.5 None
ERR3470650 Other lineage4.6.5 None
ERR386896 Other lineage4.6.5 None
ERR11049438 MDR-TB lineage4.6.5 None
ERR386822 Other lineage3 None
ERR351890 Other lineage3 None
ERR11049467 MDR-TB lineage4.6.5 None
ERR387000 Other lineage3 None
ERR4798961 Sensitive lineage3 in
ERR4796807 MDR-TB lineage3 in
ERR4797588 MDR-TB lineage3 None
ERR5897085 Pre-XDR-TB lineage2.2.1 None
ERR6358849 MDR-TB lineage4.6.1.1 None
ERR6358721 MDR-TB lineage4.6.5;lineage4.6.1.2 None
ERR688009 Sensitive lineage3 None
ERR6397159 Other lineage4.6.5 None
ERR7801175 RR-TB lineage4.6.5 None
ERR9285995 Other lineage4.6.5 None
ERR9117701 MDR-TB lineage4.6.5 None
ERR9125562 Other lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR11050065 Other lineage4.6.5 None
ERR9286020 Sensitive lineage3.1.1 None
SRR14164819 Sensitive lineage4.1.2.1 None
SRR10306017 MDR-TB lineage4.5 None
SRR14164492 Sensitive lineage4.1.2.1 None
SRR13888775 Sensitive La2 None
SRR14164359 Sensitive lineage4.1.2.1 None
SRR14165045 Sensitive lineage4.1.2.1 None
SRR14164908 Sensitive lineage4.1.2.1 None
SRR15014646 MDR-TB lineage3 None
SRR15315933 MDR-TB lineage2.2.1 None
ERR11050618 Other lineage4.6.5 None
SRR15368802 Sensitive lineage2.2.1 None
ERR11050620 Other lineage4.6.5 None
SRR16058163 Other lineage4.6.5 None
SRR17832809 Sensitive lineage3.1.2 None
SRR17832803 Sensitive lineage3.1.2 None
SRR18213916 Other lineage4.6.5 None
SRR18213728 Other lineage3 None
SRR2100924 Other lineage4.6.5 None
SRR19318149 Sensitive lineage3.1.1 None
SRR21239826 Sensitive lineage4.1.2.1 None
SRR2101228 Other lineage3 None
SRR21277706 Sensitive lineage2.2.1 None
ERR11050867 MDR-TB lineage4.6.5 None
SRR21277157 Sensitive lineage2.2.1 None
SRR21276914 MDR-TB lineage2.2.1 None
SRR21277112 Sensitive lineage2.2.1 None
SRR21279369 Sensitive lineage2.2.1 None
SRR21277813 Sensitive lineage2.2.1 None
SRR21728327 Other lineage4.6.5 None
SRR21279409 Sensitive lineage2.2.1 None
SRR21658388 Other lineage4.6.5 None
SRR21661626 Other lineage4.6.5 None
SRR21662753 Sensitive lineage4.5 None
SRR21722055 Other lineage4.6.5 None
SRR21279373 Sensitive lineage2.2.1 None
SRR21279439 Sensitive lineage2.2.1 None
ERR11068067 MDR-TB lineage4.6.5 None
ERR11068100 Sensitive lineage4.5 None
ERR11068123 Sensitive lineage4.2.1.1 None
ERR11081049 MDR-TB lineage4.6.5 None
ERR11081093 MDR-TB lineage4.6.5 None
ERR11081160 MDR-TB lineage4.6.5 None
ERR11081207 MDR-TB lineage4.6.5 None
ERR11081348 MDR-TB lineage4.6.5 None
ERR11081318 MDR-TB lineage4.6.5 None
ERR11081688 MDR-TB lineage4.6.5 None
ERR11082694 MDR-TB lineage4.6.5 None
ERR11082796 Other lineage4.6.5 None
SRR3082076 MDR-TB lineage4.6.5 None
ERR4815152 Other lineage4.6.5 None
ERR4797242 Sensitive lineage3 in
SRR3082086 MDR-TB lineage4.6.5 None
ERR4815280 Other None
SRR3082085 MDR-TB lineage4.6.5 None
SRR3085337 MDR-TB lineage4.6.5 None
ERR4815063 Sensitive lineage3 gb
ERR3275855 Other lineage4.6.5 nl
ERR3275721 Other lineage4.6.5 nl
SRR3085338 MDR-TB lineage4.6.5 None
ERR2677450 MDR-TB lineage4.6.5 de
ERR4817024 HR-TB lineage4.6.5 None
ERR2503444 Sensitive lineage4.1.2.1 fi
SRR1723934 MDR-TB lineage4.5 None
ERR4816728 Sensitive lineage3 gb
ERR2503361 Sensitive lineage4.1.2.1 None
ERR3275928 Other lineage4.6.5 nl
ERR4818395 Other lineage3 gb
ERR4818444 Other lineage4.6.5 None
ERR2503457 Sensitive lineage4.1.2.1 fi
ERR2503487 Sensitive lineage4.1.2.1 fi
ERR2503512 Sensitive lineage4.1.2.1 fi
ERR2503496 Sensitive lineage4.1.2.1 fi
ERR2503507 Sensitive lineage4.1.2.1 fi
ERR2503538 HR-TB lineage4.1.2.1 fi
ERR2503527 Sensitive lineage4.1.2.1 fi
ERR2503522 Sensitive lineage4.1.2.1 fi
ERR2503554 Sensitive lineage4.1.2.1 fi
ERR2516969 MDR-TB lineage4.6.5 gb
ERR2513617 Other lineage4.6.5 gb
ERR2179647 MDR-TB lineage4.5 None
ERR2517024 MDR-TB lineage3 gb
ERR4820865 MDR-TB lineage4.6.5 gb
ERR2517259 MDR-TB lineage4.6.5 nl
ERR2515056 Sensitive lineage3 gb
ERR2515070 Sensitive lineage3 gb
ERR4820065 Sensitive lineage1.2.1.1 None
ERR3275959 Other lineage4.6.5 nl
ERR2516289 MDR-TB lineage4.6.5 be
ERR2653016 HR-TB lineage4.1.4 None
ERR2517453 Other lineage4.6.5 nl
ERR2517507 Other lineage4.6.5 nl
ERR2653234 RR-TB lineage4.1.2.1 None
ERR4821935 Other lineage4.6.5 gb
ERR278537 Other lineage4.6.5 None
SRR5818640 MDR-TB lineage4.6.5 dj
ERR4822245 Other lineage3 gb
ERR4822294 MDR-TB lineage4.6.5 None
SRR5818574 MDR-TB lineage4.6.5 dj
SRR5818629 Other lineage4.6.5 dj
ERR4822640 Sensitive lineage4.8 None
SRR5818633 MDR-TB lineage4.6.5 dj
SRR5818645 Other lineage4.6.5 dj
ERR4829100 MDR-TB lineage4.6.5 dj
SRR5818665 Other lineage4.6.5 dj
SRR5818696 MDR-TB lineage4.6.5 dj
SRR6045177 HR-TB lineage3 gb
ERR4829886 Other lineage4.6.5 it
ERR4828796 HR-TB lineage4.6.5 None
ERR4829104 MDR-TB lineage4.6.5 dj
ERR4829436 Other lineage4.6.5 it
ERR4829144 Pre-XDR-TB lineage3 pk
ERR4829377 MDR-TB lineage4.6.5 it
ERR4828980 MDR-TB lineage4.6.5 None
ERR4828797 Other lineage4.6.5 None
ERR4828839 MDR-TB lineage4.6.5 None
ERR4828798 HR-TB lineage4.6.5 None
ERR4828826 MDR-TB lineage4.6.5 it
ERR4828873 MDR-TB lineage4.6.5 None
ERR4828994 MDR-TB lineage4.6.5 it
ERR4830795 MDR-TB lineage4.6.5 et
ERR4831324 MDR-TB lineage4.6.5 de
ERR4831233 MDR-TB lineage4.6.5 None
SRR6824591 MDR-TB lineage4.5 cn
SRR6964506 MDR-TB lineage3 None
ERR11067359 Other lineage4.6.5 None