Rv3261 - c.-196delA
Drug resistance types
64 Sensitive
2 RR-TB
12 HR-TB
114 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
107 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 35 |
| lineage4.6.5 | 200 |
| lineage2.2.1 | 16 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1 | 20 |
| lineage2.2.1;lineage3 | 3 |
| lineage4.8 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.2 | 7 |
| lineage4.6.1.2;lineage4.6.5 | 1 |
| lineage4.5 | 8 |
| lineage4.1.2 | 1 |
| lineage3.1.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| La2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.4 | 1 |
| La3 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 305 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796807 | MDR-TB | lineage3 | in | ERR2120246 | MDR-TB | lineage4.6.5 | None | SRR27332328 | Sensitive | lineage3 | None | SRR30180249 | MDR-TB | lineage2.2.1 | None | ERR9125562 | Other | lineage4.6.5 | None | ERR4815063 | Other | lineage3 | gb | SRR18213728 | Other | lineage3 | None | ERR2120282 | MDR-TB | lineage4.6.5 | None | ERR13292135 | Other | lineage4.6.5 | None | ERR6358849 | MDR-TB | lineage4.6.1.1 | None | ERR2120292 | MDR-TB | lineage4.6.5 | None | ERR11050620 | Other | lineage4.6.5 | None | ERR11465185 | Sensitive | lineage4.6.5 | None | ERR13278947 | MDR-TB | lineage4.6.5 | None | SRR29341502 | MDR-TB | lineage4.6.5 | None | ERR5897085 | Pre-XDR-TB | lineage2.2.1 | None | ERR2503522 | Sensitive | lineage4.1.2.1 | fi | ERR13276369 | MDR-TB | lineage4.6.5 | None | SRR25827461 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13276411 | MDR-TB | lineage4.6.5 | None | ERR13276423 | MDR-TB | lineage4.6.5 | None | SRR7069382 | Other | lineage4.6.5 | None | SRR7069848 | Other | lineage4.6.5 | None | ERR4828798 | HR-TB | lineage4.6.5 | None | ERR4828796 | HR-TB | lineage4.6.5 | None | SRR29055931 | MDR-TB | lineage4.8 | None | ERR4830795 | MDR-TB | lineage4.6.5 | et | ERR2120301 | Other | lineage4.6.5 | None | SRR21732416 | Other | lineage4.6.5 | None | ERR2513617 | Other | lineage4.6.5 | gb | ERR11044365 | MDR-TB | lineage4.6.5 | None | SRR21658388 | Other | lineage4.6.5 | None | ERR13245556 | MDR-TB | lineage2.2.2 | None | SRR17832803 | Sensitive | lineage3.1.2 | None | ERR1034577 | Sensitive | lineage3 | pk | ERR6358721 | MDR-TB | lineage4.6.1.2;lineage4.6.5 | None | ERR2517507 | Other | lineage4.6.5 | nl | ERR2677450 | MDR-TB | lineage4.6.5 | de | ERR4820865 | MDR-TB | lineage4.6.5 | gb | ERR4822245 | Other | lineage3 | gb | ERR2517259 | MDR-TB | lineage4.6.5 | nl | ERR11043665 | MDR-TB | lineage4.6.5 | None | SRR5818696 | MDR-TB | lineage4.6.5 | dj | ERR4816728 | Sensitive | lineage3 | gb | ERR11044102 | MDR-TB | lineage4.6.5 | None | ERR11043111 | MDR-TB | lineage4.6.5 | None | SRR22249811 | Sensitive | lineage3 | None | SRR29126385 | Other | lineage4.6.5 | None | SRR28044422 | Sensitive | lineage3.1.2 | None | ERR2120298 | Other | lineage4.6.5 | None | ERR2179647 | MDR-TB | lineage4.5 | None | SRR21277706 | Sensitive | lineage2.2.1 | None | ERR11465184 | Other | lineage4.6.5 | None | ERR2503538 | HR-TB | lineage4.1.2.1 | fi | SRR21690970 | Other | lineage4.6.5 | None | ERR11043110 | MDR-TB | lineage4.6.5 | None | ERR11049467 | MDR-TB | lineage4.6.5 | None | SRR21689730 | Other | lineage4.6.5 | None | ERR11082796 | Other | lineage4.6.5 | None | ERR2517453 | Other | lineage4.6.5 | nl | ERR4828873 | MDR-TB | lineage4.6.5 | None | SRR25827557 | Sensitive | lineage3.1.2 | None | ERR6397159 | Other | lineage4.6.5 | None | ERR4821935 | Other | lineage4.6.5 | gb | SRR7068992 | Sensitive | lineage3 | None | ERR2120269 | MDR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR11067359 | Other | lineage4.6.5 | None | ERR11081160 | MDR-TB | lineage4.6.5 | None | ERR4828839 | MDR-TB | lineage4.6.5 | None | SRR6045177 | HR-TB | lineage3 | gb | SRR14164359 | Sensitive | lineage4.1.2.1 | None | ERR4817024 | HR-TB | lineage4.6.5 | None | SRR29096375 | Other | lineage4.6.5 | None | ERR11043537 | MDR-TB | lineage4.6.5 | None | ERR10465861 | Other | lineage4.6.5 | None | ERR11049048 | Other | lineage4.6.5 | None | SRR7069269 | Other | lineage4.6.5 | None | ERR13276286 | MDR-TB | lineage4.6.5 | None | ERR2120293 | MDR-TB | lineage4.6.5 | None | SRR14164908 | Sensitive | lineage4.1.2.1 | None | SRR14781846 | Sensitive | lineage4.1.2 | None | ERR13286030 | Other | lineage4.6.5 | None | ERR386896 | Other | lineage4.6.5 | None | ERR13289911 | HR-TB | lineage3 | None | ERR386822 | Other | lineage3 | None | ERR11068100 | Sensitive | lineage4.5 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR19318149 | Sensitive | lineage3.1.1 | None | ERR2503487 | Sensitive | lineage4.1.2.1 | fi | SRR29906788 | Other | lineage4.6.5 | None | SRR21728327 | Other | lineage4.6.5 | None | SRR6824591 | MDR-TB | lineage4.5 | cn | ERR2120280 | Other | lineage4.6.5 | None | SRR5818645 | Other | lineage4.6.5 | dj | SRR21689667 | Other | lineage4.6.5 | None | ERR2791545 | Sensitive | lineage4.1.2.1 | None | SRR21722055 | Other | lineage4.6.5 | None | SRR21279439 | Sensitive | lineage2.2.1 | None | SRR29230729 | Sensitive | lineage3 | None | ERR13276387 | MDR-TB | lineage4.6.5 | None | SRR29053561 | Sensitive | lineage4.5 | None | ERR2120295 | MDR-TB | lineage4.6.5 | None | ERR2120270 | MDR-TB | lineage4.6.5 | None | ERR2120290 | MDR-TB | lineage4.6.5 | None | ERR11049049 | Other | lineage4.6.5 | None | SRR29906754 | Other | lineage4.6.5 | None | ERR11081348 | MDR-TB | lineage4.6.5 | None | ERR11081207 | MDR-TB | lineage4.6.5 | None | ERR11043121 | MDR-TB | lineage4.6.5 | None | ERR2120279 | HR-TB | lineage4.6.5 | None | ERR11044069 | MDR-TB | lineage4.6.5 | None | ERR11043980 | Other | lineage4.6.5 | None | ERR2120257 | MDR-TB | lineage4.6.5 | None | ERR4828797 | Other | lineage4.6.5 | None | ERR11043420 | Other | lineage4.6.5 | None | SRR29126210 | Other | lineage4.6.5 | None | SRR7069684 | Other | lineage4.6.5 | None | ERR10225429 | Pre-XDR-TB | lineage3 | None | SRR5818574 | MDR-TB | lineage4.6.5 | dj | ERR2516289 | MDR-TB | lineage4.6.5 | be | SRR25827539 | Sensitive | lineage3.1.2 | None | ERR3275855 | Other | lineage4.6.5 | nl | ERR2120271 | Other | lineage4.6.5 | None | ERR688009 | Sensitive | lineage3 | None | SRR15368802 | Sensitive | lineage2.2.1 | None | ERR2120288 | MDR-TB | lineage4.6.5 | None | ERR11044170 | MDR-TB | lineage4.6.5 | None | SRR6964506 | MDR-TB | lineage3 | None | ERR11775862 | Other | lineage4.6.5 | None | ERR2120262 | MDR-TB | lineage4.6.5 | None | ERR2120265 | MDR-TB | lineage4.6.5 | None | SRR2100924 | Other | lineage4.6.5 | None | SRR7069110 | Other | lineage4.6.5 | None | ERR2120249 | MDR-TB | lineage4.6.5 | None | ERR4831324 | MDR-TB | lineage4.6.5 | de | ERR11044454 | Other | lineage4.6.5 | None | ERR11049438 | MDR-TB | lineage4.6.5 | None | ERR11081049 | MDR-TB | lineage4.6.5 | None | SRR17832809 | Sensitive | lineage3.1.2 | None | SRR7069928 | Other | lineage4.6.5 | None | SRR14164819 | Sensitive | lineage4.1.2.1 | None | SRR14165045 | Sensitive | lineage4.1.2.1 | None | ERR2503512 | Sensitive | lineage4.1.2.1 | fi | SRR21239826 | Sensitive | lineage4.1.2.1 | None | SRR21279373 | Sensitive | lineage2.2.1 | None | ERR3275721 | Other | lineage4.6.5 | nl | ERR387000 | Other | lineage3 | None | ERR2120276 | Other | lineage4.6.5 | None | ERR4829436 | Other | lineage4.6.5 | it | ERR3275959 | Other | lineage4.6.5 | nl | ERR13276215 | MDR-TB | lineage4.6.5 | None | SRR22251920 | Sensitive | lineage1.2.1.2.1 | None | SRR25827531 | Sensitive | lineage3.1.2 | None | ERR2516969 | MDR-TB | lineage4.6.5 | gb | ERR4820065 | Sensitive | lineage1.2.1.1 | None | ERR4829377 | MDR-TB | lineage4.6.5 | it | ERR2120299 | Other | lineage4.6.5 | None | ERR9117701 | MDR-TB | lineage4.6.5 | None | SRR27332284 | Other | lineage4.6.5 | None | SRR21690769 | Other | lineage4.6.5 | None | ERR4828826 | MDR-TB | lineage4.6.5 | it | SRR27332342 | Other | lineage4.6.5 | None | ERR2120266 | MDR-TB | lineage4.6.5 | None | ERR351890 | Other | lineage3 | None | SRR15014646 | MDR-TB | lineage3 | None | ERR2503457 | Sensitive | lineage4.1.2.1 | fi | SRR21661626 | Other | lineage4.6.5 | None | SRR21276914 | MDR-TB | lineage2.2.1 | None | SRR21690303 | HR-TB | lineage4.6.5 | None | SRR7070162 | Other | lineage4.6.5 | None | SRR13888775 | Other | La2 | None | ERR2120291 | MDR-TB | lineage4.6.5 | None | SRR15315933 | MDR-TB | lineage2.2.1 | None | ERR11044475 | MDR-TB | lineage4.6.5 | None | SRR21279369 | Sensitive | lineage2.2.1 | None | ERR4818395 | Sensitive | lineage3 | gb | ERR13260740 | Other | lineage4.6.5 | None | ERR13276421 | MDR-TB | lineage4.6.5 | None | ERR11068123 | Sensitive | lineage4.2.1.1 | None | SRR3082085 | MDR-TB | lineage4.6.5 | None | ERR1023376 | Other | lineage4.6.5 | None | SRR10306017 | MDR-TB | lineage4.5 | None | SRR29126796 | Other | lineage4.6.5 | None | ERR2503361 | Sensitive | lineage4.1.2.1 | None | SRR7069613 | Other | lineage4.6.5 | None | SRR21690226 | MDR-TB | lineage4.6.5 | None | SRR21662753 | Other | lineage4.5 | None | ERR4829100 | MDR-TB | lineage4.6.5 | dj | SRR3085337 | MDR-TB | lineage4.6.5 | None | SRR21277157 | Sensitive | lineage2.2.1 | None | SRR16058163 | Other | lineage4.6.5 | None | ERR11068067 | MDR-TB | lineage4.6.5 | None | ERR13276254 | MDR-TB | lineage4.6.5 | None | SRR22251812 | Sensitive | lineage3 | None | ERR2120248 | MDR-TB | lineage4.6.5 | None | SRR21690705 | Other | lineage4.6.5 | None | SRR2101228 | Other | lineage3 | None | ERR2120287 | MDR-TB | lineage4.6.5 | None | SRR21691160 | Other | lineage4.6.5 | None | ERR13276133 | MDR-TB | lineage4.6.5 | None | ERR2791561 | Sensitive | lineage4.1.2.1 | None | SRR22251578 | Sensitive | lineage3 | None | ERR4829104 | MDR-TB | lineage4.6.5 | dj | SRR28044448 | Other | lineage2.2.1 | None | SRR26800463 | Other | lineage4.6.5 | None | SRR5818640 | MDR-TB | lineage4.6.5 | dj | ERR4831233 | MDR-TB | lineage4.6.5 | None | SRR29126547 | Other | lineage4.6.5 | None | SRR29096796 | Other | lineage3 | None | ERR13093958 | Other | lineage4.6.5 | None | ERR13285370 | HR-TB | lineage4.6.5 | None | ERR2120286 | MDR-TB | lineage4.6.5 | None | ERR2120268 | MDR-TB | lineage4.6.5 | None | SRR29096256 | Sensitive | lineage3 | None | SRR5818629 | Other | lineage4.6.5 | dj | ERR4797242 | Sensitive | lineage3 | in | ERR2120274 | MDR-TB | lineage4.6.5 | None | SRR29052771 | Other | lineage4.6.5 | None | SRR25827523 | Sensitive | lineage3.1.2 | None | ERR2120285 | Other | lineage4.6.5 | None | SRR14164492 | Sensitive | lineage4.1.2.1 | None | ERR4829886 | Other | lineage4.6.5 | it | ERR11081688 | MDR-TB | lineage4.6.5 | None | ERR11044129 | MDR-TB | lineage4.6.5 | None | ERR2120264 | MDR-TB | lineage4.6.5 | None | ERR2120284 | Other | lineage4.6.5 | None | ERR2120278 | HR-TB | lineage4.6.5 | None | SRR21732607 | Other | lineage4.6.5 | None | SRR5818665 | Other | lineage4.6.5 | dj | ERR3470650 | Other | lineage4.6.5 | None | ERR278537 | Other | lineage4.6.5 | None | ERR4829144 | Pre-XDR-TB | lineage3 | pk | ERR13191053 | MDR-TB | lineage2.2.2 | None | ERR2120289 | MDR-TB | lineage4.6.5 | None | SRR3082086 | MDR-TB | lineage4.6.5 | None | SRR28045898 | Sensitive | lineage3 | None | SRR5818633 | MDR-TB | lineage4.6.5 | dj | ERR2653016 | HR-TB | lineage4.1.4 | None | ERR2503527 | Sensitive | lineage4.1.2.1 | fi | ERR2503554 | Sensitive | lineage4.1.2.1 | fi | ERR11043538 | MDR-TB | lineage4.6.5 | None | ERR11081093 | MDR-TB | lineage4.6.5 | None | SRR21277112 | Sensitive | lineage2.2.1 | None | SRR7069705 | Sensitive | lineage3 | None | SRR25827399 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR2120259 | MDR-TB | lineage4.6.5 | None | ERR2120272 | Other | lineage4.6.5 | None | ERR2120277 | Other | lineage4.6.5 | None | ERR2120297 | Other | lineage4.6.5 | None | ERR11082694 | MDR-TB | lineage4.6.5 | None | SRR3082076 | MDR-TB | lineage4.6.5 | None | ERR2503496 | Sensitive | lineage4.1.2.1 | fi | ERR4822294 | MDR-TB | lineage4.6.5 | None | SRR29906771 | Other | lineage4.6.5 | None | SRR28044651 | Sensitive | lineage3 | None | ERR11050618 | Other | lineage4.6.5 | None | ERR11050867 | MDR-TB | lineage4.6.5 | None | SRR18213916 | Other | lineage4.6.5 | None | SRR3085338 | MDR-TB | lineage4.6.5 | None | ERR2517024 | MDR-TB | lineage3 | gb | ERR4828994 | MDR-TB | lineage4.6.5 | it | ERR11043963 | Sensitive | lineage4.5 | None | SRR29055651 | Other | lineage4.6.5 | None | SRR21732062 | Other | lineage4.6.5 | None | ERR4798961 | Sensitive | lineage3 | in | ERR3275928 | Other | lineage4.6.5 | nl | ERR4818444 | Other | lineage4.6.5 | None | ERR2659153 | Other | La3 | None | ERR2120267 | MDR-TB | lineage4.6.5 | None | ERR2120281 | Other | lineage4.6.5 | None | ERR2120302 | Other | lineage4.6.5 | None | ERR11043614 | MDR-TB | lineage4.6.5 | None | ERR2515070 | Sensitive | lineage3 | gb | ERR9285995 | Other | lineage4.6.5 | None | ERR4828980 | MDR-TB | lineage4.6.5 | None | ERR11050065 | Other | lineage4.6.5 | None | SRR1723934 | MDR-TB | lineage4.5 | None | SRR21279409 | Sensitive | lineage2.2.1 | None | SRR12420291 | Other | lineage2.2.1 | None | SRR7829594 | MDR-TB | lineage4.6.5 | None | ERR2120296 | Other | lineage4.6.5 | None | ERR2120283 | MDR-TB | lineage4.6.5 | None | SRR26800485 | Other | lineage4.6.5 | None | ERR2120247 | MDR-TB | lineage4.6.5 | None | ERR2120294 | MDR-TB | lineage4.6.5 | None | SRR21277813 | Sensitive | lineage2.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR2503444 | Sensitive | lineage4.1.2.1 | fi | SRR7069253 | Other | lineage4.6.5 | None | ERR9286020 | Sensitive | lineage3.1.1 | None | ERR2120300 | Other | lineage4.6.5 | None | ERR11081318 | MDR-TB | lineage4.6.5 | None | ERR13276280 | MDR-TB | lineage4.6.5 | None | ERR2515056 | Sensitive | lineage3 | gb | SRR24673512 | MDR-TB | lineage2.2.1 | None | ERR4815152 | Other | lineage4.6.5 | None | ERR11044588 | MDR-TB | lineage4.6.5 | None | ERR2120275 | MDR-TB | lineage4.6.5 | None | SRR25827458 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR2653234 | RR-TB | lineage4.1.2.1 | None | ERR13093865 | Sensitive | lineage4.6.2.2 | None | SRR29053435 | Sensitive | lineage3.1.1 | None | SRR29341526 | MDR-TB | lineage4.6.5 | None | ERR2503507 | Sensitive | lineage4.1.2.1 | fi |
|---|
