lineage | Count |
---|---|
lineage2.2.1 | 23 |
lineage1.1.1 | 1 |
lineage3.1.2 | 1 |
lineage4.3.2 | 4 |
lineage1.1.2 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.1.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage3 | 1 |
lineage4.3.3 | 2 |
lineage3.1.3 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | SRR23339996 | MDR-TB | lineage2.2.1 | None | ERR551947 | MDR-TB | lineage2.2.1 | None | ERR718447 | Sensitive | lineage1.1.1 | th | ERR5865079 | MDR-TB | lineage2.2.1 | None | ERR551946 | MDR-TB | lineage2.2.1 | None | SRR29772658 | HR-TB | lineage3.1.2 | None | SRR18715003 | HR-TB | lineage2.2.1 | None | ERR2307748 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517535 | Sensitive | lineage4.3.2 | nl | SRR8380943 | MDR-TB | lineage1.1.2 | in | SRR6397981 | HR-TB | lineage1.2.1.2.1 | ca | ERR1193737 | Sensitive | lineage4.3.2 | pt | ERR2513404 | Sensitive | lineage4.1.2.1 | gb | ERR3256162 | Other | lineage1.2.1.2.1 | ph | SRR3743397 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446455 | Sensitive | lineage4.3.2 | nl | SRR21798448 | MDR-TB | lineage2.2.1 | None | SRR960981 | Other | lineage2.2.1 | cn | ERR551946_ERR551947 | MDR-TB | lineage2.2.1 | None | SRR15600356 | MDR-TB | lineage2.2.1.1 | None | ERR4829127 | Pre-XDR-TB | lineage3 | pk | ERR5866094 | MDR-TB | lineage2.2.1 | None | ERR3275245 | Sensitive | lineage4.3.2 | nl | ERR4811210 | Sensitive | lineage2.2.1 | cn | ERR8699097 | Sensitive | lineage4.3.3 | None | SRR21277450 | Other | lineage2.2.1 | None | ERR5865080 | MDR-TB | lineage2.2.1 | None | SRR2100419 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799253 | Sensitive | lineage3.1.3 | in | ERR8699679 | Sensitive | lineage4.3.3 | None | ERR5866093 | MDR-TB | lineage2.2.1 | None | SRR15600385 | MDR-TB | lineage2.2.1.1 | None | ERR6866614 | Sensitive | lineage2.2.1 | None | ERR5865077 | MDR-TB | lineage2.2.1 | None | SAMEA2534309 | MDR-TB | lineage2.2.1 | uz | ERR550405 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498381 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651636 | Sensitive | lineage2.2.1 | cn | ERR5865078 | MDR-TB | lineage2.2.1 | None |
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