lineage | Count |
---|---|
53 | |
lineage2.2.1 | 29 |
lineage4.5 | 1 |
lineage2 | 2 |
lineage4 | 2 |
La1.8.1 | 1 |
La2 | 1 |
lineage4.9 | 1 |
La1 | 1 |
spoligotype | Count |
---|---|
None | 91 |
ID | Drug resistance | Lineage | Country iso2 | SRR12416824 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR19304036 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR21686099 | Sensitive | lineage2.2.1 | None | SRR3675290 | Sensitive | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR11081217 | Sensitive | lineage2.2.1 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR3675311 | Other | None | SRR3675550 | Other | None | ERR2516888 | MDR-TB | lineage2.2.1 | gb | ERR4816466 | HR-TB | None | ERR2516330 | MDR-TB | lineage2.2.1 | be | ERR3275418 | MDR-TB | lineage2.2.1 | nl | ERR4818021 | Other | La1.8.1 | None | SRR1723808 | MDR-TB | lineage2.2.1 | cn | ERR2516963 | MDR-TB | lineage2.2.1 | gb | ERR2446280 | MDR-TB | lineage2.2.1 | nl | ERR2516536 | MDR-TB | lineage2.2.1 | nl | ERR2516718 | MDR-TB | lineage2.2.1 | nl | ERR2517117 | MDR-TB | lineage2.2.1 | gb | SRR5341418 | Other | None | ERR2517307 | MDR-TB | lineage2.2.1 | nl | ERR2516795 | MDR-TB | lineage2.2.1 | gb | SAMEA2533628 | Sensitive | lineage2.2.1 | pl | ERR2693231 | Other | None | ERR2517436 | MDR-TB | lineage2.2.1 | nl | ERR2693254 | Other | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | SRR6045053 | Other | None | SRR6046133 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046492 | Other | None | ERR294266 | HR-TB | None | SRR6824657 | MDR-TB | lineage2.2.1 | cn | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7517719 | MDR-TB | lineage2.2.1 | ch | ERR502889 | Other | None | SRR8237380 | Sensitive | lineage2.2.1 | ch | SRR8237397 | Sensitive | lineage2.2.1 | ch | ERR323038 | HR-TB | None | ERR3283024 | Other | None | ERR323055 | HR-TB | None | ERR1034652 | Other | None | ERR11043748 | Sensitive | lineage2.2.1 | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4407551 | Sensitive | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736865 | HR-TB | None | ERR11049926 | Sensitive | lineage2.2.1 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR7975660 | MDR-TB | lineage2.2.1 | None | ERR7975646 | MDR-TB | lineage2.2.1 | None | ERR7975682 | MDR-TB | lineage2.2.1 | None | ERR7975662 | MDR-TB | lineage2.2.1 | None | SRR10306029 | MDR-TB | lineage2.2.1 | None |
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