lineage | Count |
---|---|
lineage4.3.3 | 1 |
lineage4.3.2 | 3 |
lineage2.2.1 | 9 |
lineage4.3.4.2 | 1 |
lineage3 | 5 |
lineage1.1.2 | 3 |
lineage4.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.2.1 | 5 |
lineage4.9 | 2 |
spoligotype | Count |
---|---|
None | 32 |
ID | Drug resistance | Lineage | Country iso2 | SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975773 | Pre-XDR-TB | lineage4.3.2 | None | ERR5865249 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035271 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR3275597 | HR-TB | lineage3 | nl | ERR4797027 | MDR-TB | lineage1.1.2 | in | ERR11049758 | Sensitive | lineage4.1.2.1 | None | SRR25827315 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865247 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035328 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR7652996 | MDR-TB | lineage4.2.1 | None | ERR13285754 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865251 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112895 | MDR-TB | lineage4.3.2 | None | ERR10762266 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865250 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153270 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446075 | HR-TB | lineage3 | nl | SRR7755742 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865248 | Pre-XDR-TB | lineage2.2.1 | None | ERR688030 | Pre-XDR-TB | lineage4.9 | pk | ERR1034598 | Pre-XDR-TB | lineage4.9 | pk | SRR29772615 | RR-TB | lineage2.2.1 | None | SRR3743462 | Pre-XDR-TB | lineage4.2.1 | None | SRR10040428 | MDR-TB | lineage2.2.1 | None | ERR13285392 | HR-TB | lineage3 | None | SRR7898227 | Pre-XDR-TB | lineage1.1.2 | in | ERR1394280 | Pre-XDR-TB | lineage1.1.2 | None | ERR11773825 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112842 | Pre-XDR-TB | lineage4.3.2 | None | ERR2517289 | HR-TB | lineage3 | nl | SRR21690328 | HR-TB | lineage3 | None |
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