Rv3423c - p.Lys157Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
7 MDR-TB
102 Pre-XDR-TB
8 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 37 |
| lineage4.1.2.1 | 12 |
| lineage4.3.3 | 3 |
| lineage4.2.1 | 5 |
| lineage2.2.2 | 35 |
| lineage3.1 | 8 |
| lineage4.8 | 6 |
| La1.7.1 | 2 |
| lineage3 | 5 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10762328 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738479 | XDR-TB | lineage4.1.2.1 | None | SRR833173 | Pre-XDR-TB | lineage4.3.3 | za | SRR23311047 | Pre-XDR-TB | lineage4.2.1 | None | SRR1013626 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665677 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289502 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979435 | Pre-XDR-TB | lineage3.1 | None | DRR130185 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273819 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013668 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049046 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665513 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049019 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | ERR13266444 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285873 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276412 | Pre-XDR-TB | lineage3.1 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | ERR13284987 | MDR-TB | lineage4.8 | None | SRR1047984 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049074 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049020 | Pre-XDR-TB | lineage2.2.2 | None | DRR130114 | Pre-XDR-TB | lineage2.2.1 | None | SRR6256968 | MDR-TB | lineage2.2.1 | None | ERR2677405 | Pre-XDR-TB | lineage2.2.1 | de | ERR2677434 | MDR-TB | lineage3.1 | de | ERR2516453 | Pre-XDR-TB | La1.7.1 | nl | ERR13194010 | Pre-XDR-TB | lineage2.2.2 | None | ERR11138650 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144813 | Pre-XDR-TB | lineage2.2.2 | None | ERR11082922 | MDR-TB | lineage4.8 | None | ERR4827482 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276907 | Pre-XDR-TB | lineage3.1 | None | ERR9806882 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665678 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144783 | Pre-XDR-TB | lineage2.2.2 | None | ERR13285169 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025639 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138658 | Pre-XDR-TB | lineage2.2.2 | None | ERR13245323 | Pre-XDR-TB | lineage2.2.2 | None | ERR13267066 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232673 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138653 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049047 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048855 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013669 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013679 | Pre-XDR-TB | lineage2.2.2 | None | SRR7592328 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11043756 | MDR-TB | lineage3.1 | None | SRR22351859 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738493 | Pre-XDR-TB | lineage4.8 | None | ERR11082361 | Pre-XDR-TB | lineage2.2.1 | None | SRR13355779 | XDR-TB | lineage2.2.1 | None | ERR8665514 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888056 | XDR-TB | lineage2.2.1 | None | SRR5486894 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11138646 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758371 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675217 | Pre-XDR-TB | lineage3 | gb | ERR2517020 | Pre-XDR-TB | lineage3 | gb | ERR2516545 | Pre-XDR-TB | La1.7.1 | nl | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093380 | Pre-XDR-TB | lineage2.2.2 | None | SRR11567804 | XDR-TB | lineage2.2.2 | None | ERR13258429 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081225 | Pre-XDR-TB | lineage3.1 | None | SRR10380120 | Pre-XDR-TB | lineage4.2.1 | None | SRR924205 | Pre-XDR-TB | lineage4.3.3 | None | SRR10525334 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1049062 | Pre-XDR-TB | lineage2.2.2 | None | SAMN01925614 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013650 | Pre-XDR-TB | lineage2.2.2 | None | ERR11069098 | Pre-XDR-TB | lineage4.8 | None | SRR9738476 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1144807 | Pre-XDR-TB | lineage2.2.2 | None | SRR1144776 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873432 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017360 | Pre-XDR-TB | lineage4.3.4 | None | ERR13245563 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639782 | Pre-XDR-TB | lineage4.8 | None | ERR13276335 | Pre-XDR-TB | lineage3.1 | None | ERR13284141 | Pre-XDR-TB | lineage4.8 | None | SRR22175264 | XDR-TB | lineage4.1.2.1 | None | ERR11138648 | Pre-XDR-TB | lineage2.2.2 | None | SRR29273919 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5865865 | Pre-XDR-TB | lineage2.2.1 | None | ERR13194022 | Pre-XDR-TB | lineage2.2.2 | None | SRR29273862 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1049063 | Pre-XDR-TB | lineage2.2.2 | None | ERR13266143 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274730 | Pre-XDR-TB | lineage2.2.1 | None | ERR5897081 | Pre-XDR-TB | lineage3 | None | ERR13288750 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR3743368 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR11773735 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11081998 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806904 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013625 | Pre-XDR-TB | lineage2.2.2 | None | SRR24709976 | XDR-TB | lineage2.2.1 | None | SRR1144790 | Pre-XDR-TB | lineage2.2.2 | None | SRR29273876 | XDR-TB | lineage4.1.2.1 | None | SRR24466801 | XDR-TB | lineage4.1.2.1 | None | SRR3743398 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592382 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11798713 | Pre-XDR-TB | lineage4.2.1 | None | ERR13289513 | Pre-XDR-TB | lineage3 | None | SRR1049075 | Pre-XDR-TB | lineage2.2.2 | None | ERR13276396 | MDR-TB | lineage3.1 | None | ERR5865866 | Pre-XDR-TB | lineage2.2.1 | None | SRR7652996 | MDR-TB | lineage4.2.1 | None | SRR1013680 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | ERR5897074 | Pre-XDR-TB | lineage3 | None | ERR8025445 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911689 | Pre-XDR-TB | lineage2.2.1 | za |
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