| lineage | Count |
|---|---|
| lineage2.2.1 | 10 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.2 | 6 |
| lineage4.3.4.2 | 14 |
| lineage4.3.3 | 2 |
| lineage4.8 | 4 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage1.2.2.2 | 2 |
| spoligotype | Count |
|---|---|
| None | 40 |
| ID | Drug resistance | Lineage | Country iso2 | ERR192451 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827631 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4830631 | MDR-TB | lineage2.2.1 | None | ERR8975846 | XDR-TB | lineage2.2.2 | None | ERR1034850 | XDR-TB | lineage4.3.4.2 | pt | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403492 | Pre-XDR-TB | lineage2.2.2 | za | ERR9993196 | XDR-TB | lineage2.2.2 | None | ERR13289036 | MDR-TB | lineage4.8 | None | ERR9993046 | XDR-TB | lineage2.2.2 | None | ERR8975976 | XDR-TB | lineage2.2.2 | None | ERR1035175 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035192 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035215 | XDR-TB | lineage4.3.4.2 | pt | ERR1035222 | XDR-TB | lineage4.3.4.2 | pt | ERR1034822 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1034847 | XDR-TB | lineage4.3.4.2 | pt | ERR1034846 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR2677455 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | de | SRR7585403 | Pre-XDR-TB | lineage2.2.1 | in | SRR7585397 | Pre-XDR-TB | lineage2.2.1 | in | ERR4822297 | Pre-XDR-TB | lineage2.2.1 | de | ERR13286169 | Pre-XDR-TB | lineage4.8 | None | ERR10762327 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2513241 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2515802 | Pre-XDR-TB | lineage1.2.2.2 | za | ERR1035199 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035226 | XDR-TB | lineage4.3.4.2 | pt | ERR1035235 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035240 | Pre-XDR-TB | lineage4.3.4.2 | pt | SAMN02403468 | Pre-XDR-TB | lineage2.2.1 | za | ERR1034633 | XDR-TB | lineage4.3.4.2 | None | ERR4797391 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799456 | Pre-XDR-TB | lineage2.2.1 | in | ERR4822355 | MDR-TB | lineage2.2.1 | None | ERR13286163 | XDR-TB | lineage1.2.2.2 | None | ERR9992629 | Pre-XDR-TB | lineage4.3.3 | None | ERR4808875 | Pre-XDR-TB | lineage2.2.2 | za | ERR11774835 | XDR-TB | lineage4.8 | None | ERR7361969 | Pre-XDR-TB | lineage4.8 | None |
|---|