lineage | Count |
---|---|
lineage4.5 | 3 |
lineage4.3.4.1 | 2 |
lineage4.1.2.1 | 12 |
lineage4.8 | 23 |
lineage4.3.3 | 5 |
lineage2.2.1 | 32 |
La1.2.BCG | 1 |
lineage4.2.1 | 6 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.3.2 | 1 |
lineage4.9 | 5 |
lineage4.6.2.2 | 1 |
lineage4.2;lineage3 | 1 |
La1.4 | 2 |
lineage2.2.2 | 1 |
lineage4 | 2 |
lineage2.2 | 4 |
lineage3 | 3 |
lineage4.7 | 1 |
lineage6.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage1.2.2.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 112 |
ID | Drug resistance | Lineage | Country iso2 | ERR11050473 | Sensitive | lineage4.5 | None | ERR11050516 | Sensitive | lineage4.3.4.1 | None | ERR11050500 | Sensitive | lineage4.1.2.1 | None | ERR11050507 | Sensitive | lineage4.5 | None | SRR14781880 | Sensitive | lineage4.8 | None | ERR11050533 | MDR-TB | lineage4.3.3 | None | ERR11050561 | Sensitive | lineage4.8 | None | SRR14782179 | Sensitive | lineage2.2.1 | None | SRR14782108 | HR-TB | lineage2.2.1 | None | SRR14782465 | Other | La1.2.BCG | None | SRR14782333 | MDR-TB | lineage2.2.1 | None | SRR14782173 | RR-TB | lineage2.2.1 | None | SRR14782203 | Sensitive | lineage4.1.2.1 | None | SRR14782550 | Sensitive | lineage4.3.3 | None | SRR14782497 | Sensitive | lineage4.1.2.1 | None | SRR14782531 | MDR-TB | lineage4.2.1 | None | SRR14782578 | Sensitive | lineage2.2.1 | None | SRR14782639 | Sensitive | lineage4.1.2.1 | None | SRR14782587 | Sensitive | lineage4.8 | None | SRR14801741 | Sensitive | lineage2.2.1 | None | SRR14782658 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14782709 | Sensitive | lineage2.2.1 | None | SRR14801426 | Sensitive | lineage4.8 | None | SRR14801573 | Sensitive | lineage2.2.1 | None | SRR14782726 | Sensitive | lineage4.8 | None | SRR14801440 | Sensitive | lineage4.3.3 | None | ERR11050605 | Sensitive | lineage4.1.2 | None | SRR14801871 | Sensitive | lineage4.8 | None | SRR14802013 | Sensitive | lineage4.3.4.1 | None | SRR14802033 | MDR-TB | lineage2.2.1 | None | SRR14802049 | MDR-TB | lineage4.2.1 | None | SRR14801782 | Sensitive | lineage4.8 | None | SRR16088258 | Sensitive | lineage4.8 | None | ERR11050625 | Sensitive | lineage4.3.2 | None | ERR11050669 | Sensitive | lineage4.8 | None | SRR16088243 | Sensitive | lineage4.1.2.1 | None | ERR11068682 | Sensitive | lineage4.1.2.1 | None | SRR18715226 | Sensitive | lineage4.8 | None | SRR18715388 | MDR-TB | lineage2.2.1 | None | SRR16088442 | Sensitive | lineage4.2.1 | None | SRR18714783 | MDR-TB | lineage2.2.1 | None | SRR18714918 | MDR-TB | lineage2.2.1 | None | SRR18715443 | HR-TB | lineage4.8 | None | SRR25460168 | Sensitive | lineage4.3.3 | None | SRR23082538 | Sensitive | lineage4.9 | None | SRR23861966 | RR-TB | lineage4.8 | None | ERR11068955 | Sensitive | lineage4.6.2.2 | None | ERR11081475 | Sensitive | lineage4.8 | None | ERR11083079 | Sensitive | lineage4.1.2.1 | None | SRR23861779 | Sensitive | lineage4.8 | None | SRR23861870 | Sensitive | lineage4.8 | None | ERR11068929 | Sensitive | lineage4.1.2.1 | None | ERR11081214 | Sensitive | lineage4.8 | None | ERR11081939 | MDR-TB | lineage4.2;lineage3 | None | SRR23861715 | HR-TB | lineage4.2.1 | None | SRR23861890 | Sensitive | lineage2.2.1 | None | SRR23861983 | Other | lineage2.2.1 | None | SRR23862142 | Sensitive | lineage4.1.2.1 | None | SRR23862131 | Sensitive | lineage4.8 | None | SRR23562878 | Other | La1.4 | None | SRR23862167 | Other | lineage4.8 | None | SRR23862195 | Other | lineage4.8 | None | SRR23562880 | Other | La1.4 | None | SRR23938593 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR23938599 | Sensitive | lineage4.3.3 | None | SRR23938634 | MDR-TB | lineage2.2.1 | None | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887718 | RR-TB | lineage2.2.1 | None | SRR21887757 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887692 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310994 | MDR-TB | lineage4.2.1 | None | SRR25207190 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119807 | Other | lineage2.2.1 | None | SRR28119840 | RR-TB | lineage2.2.1 | None | ERR11049623 | Sensitive | lineage4 | None | SRR23071987 | Other | lineage4.9 | None | SRR23082537 | Sensitive | lineage4.9 | None | SRR23310966 | Sensitive | lineage2.2 | None | SRR20958085 | Sensitive | lineage4.9 | None | ERR11067199 | Sensitive | lineage3 | None | ERR11067210 | HR-TB | lineage4.8 | None | SRR23310946 | Sensitive | lineage2.2 | None | SRR23310976 | MDR-TB | lineage2.2 | None | SRR23310998 | MDR-TB | lineage4.2.1 | None | ERR4830061 | MDR-TB | lineage2.2.1 | None | SRR23082910 | Other | lineage4.9 | None | SRR7592356 | Pre-XDR-TB | lineage4.7 | None | ERR3148042 | MDR-TB | lineage4.1.2.1 | None | ERR4872315 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043310 | Sensitive | lineage4.8 | None | ERR10680203 | MDR-TB | lineage6.2.2 | None | ERR10748282 | MDR-TB | lineage4.1.1.3 | None | ERR11042987 | Sensitive | lineage4.1.2.1 | None | ERR11049474 | Sensitive | lineage4.5 | None | ERR11044882 | HR-TB | lineage2.2.1 | None | ERR4553439 | MDR-TB | lineage2.2 | None | ERR4553407 | MDR-TB | lineage3 | None | ERR4553474 | MDR-TB | lineage4 | None | ERR4553829 | MDR-TB | lineage3 | None | ERR11050172 | Sensitive | lineage4.8 | None | ERR7902617 | Sensitive | lineage1.2.2.1 | None | ERR4553983 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050130 | Sensitive | lineage2.2.1 | None | SRR10303331 | MDR-TB | lineage2.2.1 | None | ERR11050235 | Sensitive | lineage4.1 | None | SRR10430382 | MDR-TB | lineage2.2.1 | None | ERR11050421 | Sensitive | lineage4.8 | None | ERR11050273 | Sensitive | lineage4.1.2 | None | ERR11050367 | HR-TB | lineage4.1.2.1 | None |
---|