lineage | Count |
---|---|
lineage4.8 | 5 |
lineage4.3.3 | 4 |
lineage4.1.2 | 5 |
lineage4.3.2.1 | 3 |
lineage4.6.1.1 | 2 |
lineage4.9 | 1 |
lineage2.2.1.1 | 1 |
lineage1.1.1 | 5 |
lineage2.2.1 | 4 |
lineage1.1 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4.6.2.2 | 1 |
lineage1.2.1.2.1 | 2 |
La1.6 | 1 |
lineage3.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.4.2 | 1 |
La1.8.1 | 2 |
lineage2.2.2 | 2 |
lineage4.5 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage3 | 2 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | SRR7131096 | Other | lineage4.8 | None | SRR6896192 | Sensitive | lineage4.3.3 | None | SRR6855875 | Sensitive | lineage4.1.2 | None | SRR6982539 | Sensitive | lineage4.3.2.1 | None | SRR7535048 | Sensitive | lineage4.6.1.1 | None | SRR9940967 | Other | lineage4.9 | None | SRR7535055 | HR-TB | lineage4.6.1.1 | None | ERR4423478 | RR-TB | lineage2.2.1.1 | None | ERR718415 | Sensitive | lineage1.1.1 | th | ERR6052082 | MDR-TB | lineage2.2.1 | None | ERR4423526 | MDR-TB | lineage2.2.1 | None | ERR4800009 | Other | lineage1.1 | None | ERR6052117 | MDR-TB | lineage2.2.1 | None | ERR7361930 | HR-TB | lineage1.1.1 | None | ERR7801164 | Sensitive | lineage4.3.4.2.1 | None | ERR752185 | HR-TB | lineage1.1.1 | th | ERR767966 | Sensitive | lineage1.1.1 | th | ERR7801167 | Sensitive | lineage4.6.2.2 | None | ERR9125883 | Sensitive | lineage1.2.1.2.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR1187181 | HR-TB | lineage4.1.2 | ca | ERR9899685 | Sensitive | lineage4.8 | None | SRR10993947 | Other | La1.6 | None | SRR1188492 | Other | lineage4.1.2 | ca | SRR13591429 | Sensitive | lineage4.3.3 | None | SRR12882255 | Sensitive | lineage1.1.1 | None | SRR12882618 | HR-TB | lineage3.1.1 | None | SRR12882733 | Sensitive | lineage1.2.2.2 | None | SRR13591398 | Sensitive | lineage4.3.4.2 | None | SRR1791998 | Other | La1.8.1 | None | SRR16058270 | Sensitive | lineage1.2.1.2.1 | None | SRR1791857 | Other | La1.8.1 | None | SRR19325552 | Sensitive | lineage4.3.3 | None | SRR19428626 | Sensitive | lineage4.3.4.2.1 | None | SRR2101356 | Sensitive | lineage4.3.3 | None | SRR22179525 | HR-TB | lineage4.8 | None | SRR21277322 | Sensitive | lineage2.2.2 | None | SRR21675701 | Sensitive | lineage4.5 | None | ERR2516397 | MDR-TB | lineage4.1.2 | be | ERR8025574 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515311 | Sensitive | lineage4.3.2.1 | za | ERR2229674 | Other | lineage4.8 | None | ERR2510820 | Other | lineage4.8 | None | SRR4037968 | Sensitive | lineage2.2.1 | za | ERR2516332 | Sensitive | lineage4.4.1.1 | be | ERR2515501 | Sensitive | lineage4.1.2 | za | ERR2516394 | Sensitive | lineage4.1.2.1 | be | ERR2515543 | Sensitive | lineage4.3.2.1 | za | ERR2517298 | Sensitive | lineage4.3.4.1 | nl | ERR2516212 | Sensitive | lineage4.3.4.2.1 | be | ERR2517438 | Other | lineage3 | nl | ERR2179699 | Other | lineage4.4.2 | cn | ERR2446479 | Other | lineage3 | nl |
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